Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
ATP2B1P20020 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.62□□□□□ -2.15
ATP2B1P20020 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
ATP2B1P20020 AC106800.4-201ENST00000614905 153 ntBASIC1.61□□□□□ -2.15
ATP2B1P20020 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.61□□□□□ -2.15
ATP2B1P20020 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
ATP2B1P20020 MIR337-201ENST00000362281 93 ntBASIC1.6□□□□□ -2.15
ATP2B1P20020 RNU6-580P-201ENST00000365159 107 ntBASIC1.6□□□□□ -2.15
ATP2B1P20020 MIR588-201ENST00000384900 83 ntBASIC1.6□□□□□ -2.15
ATP2B1P20020 MIR150-201ENST00000385048 84 ntBASIC1.6□□□□□ -2.15
ATP2B1P20020 AL158147.1-201ENST00000443970 75 ntBASIC1.6□□□□□ -2.15
ATP2B1P20020 RNU7-62P-201ENST00000458856 62 ntBASIC1.6□□□□□ -2.15
ATP2B1P20020 RNU6-1211P-201ENST00000459179 105 ntBASIC1.6□□□□□ -2.15
ATP2B1P20020 snoU13.2-201ENST00000459201 104 ntBASIC1.6□□□□□ -2.15
ATP2B1P20020 RNU7-113P-201ENST00000459273 62 ntBASIC1.6□□□□□ -2.15
ATP2B1P20020 TRMT112P2-201ENST00000512910 132 ntBASIC1.6□□□□□ -2.15
ATP2B1P20020 RNU7-40P-201ENST00000516397 64 ntBASIC1.6□□□□□ -2.15
ATP2B1P20020 RNU1-92P-201ENST00000517017 135 ntBASIC1.6□□□□□ -2.15
ATP2B1P20020 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
ATP2B1P20020 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
ATP2B1P20020 ZNF209P-201ENST00000593450 2304 ntBASIC1.59□□□□□ -2.15
ATP2B1P20020 Y_RNA.171-201ENST00000363760 102 ntBASIC1.59□□□□□ -2.15
ATP2B1P20020 RNU2-35P-201ENST00000516446 142 ntBASIC1.59□□□□□ -2.15
ATP2B1P20020 RNU6-1258P-201ENST00000516911 111 ntBASIC1.59□□□□□ -2.15
ATP2B1P20020 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
ATP2B1P20020 RNY1P10-201ENST00000363268 113 ntBASIC1.58□□□□□ -2.16
ATP2B1P20020 Y_RNA.298-201ENST00000364960 107 ntBASIC1.58□□□□□ -2.16
ATP2B1P20020 MIR19B1-201ENST00000384829 87 ntBASIC1.58□□□□□ -2.16
ATP2B1P20020 MIR618-201ENST00000385287 98 ntBASIC1.58□□□□□ -2.16
ATP2B1P20020 AC113410.1-201ENST00000505029 247 ntBASIC1.58□□□□□ -2.16
ATP2B1P20020 RN7SKP19-201ENST00000516016 252 ntBASIC1.58□□□□□ -2.16
ATP2B1P20020 RNA5SP404-201ENST00000517118 132 ntBASIC1.58□□□□□ -2.16
ATP2B1P20020 Y_RNA.280-201ENST00000364765 112 ntBASIC1.57□□□□□ -2.16
ATP2B1P20020 Y_RNA.531-201ENST00000384589 121 ntBASIC1.57□□□□□ -2.16
ATP2B1P20020 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.57□□□□□ -2.16
ATP2B1P20020 AC004812.1-201ENST00000540773 146 ntBASIC1.57□□□□□ -2.16
ATP2B1P20020 MIR6740-201ENST00000618268 113 ntBASIC1.57□□□□□ -2.16
ATP2B1P20020 AC012676.2-201ENST00000619258 186 ntBASIC1.57□□□□□ -2.16
ATP2B1P20020 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
ATP2B1P20020 RNU6-1237P-201ENST00000384777 107 ntBASIC1.56□□□□□ -2.16
ATP2B1P20020 RNA5SP237-201ENST00000410414 113 ntBASIC1.56□□□□□ -2.16
ATP2B1P20020 AL512326.2-201ENST00000426359 151 ntBASIC1.56□□□□□ -2.16
ATP2B1P20020 TMSB4XP3-201ENST00000445144 114 ntBASIC1.56□□□□□ -2.16
ATP2B1P20020 RNU7-123P-201ENST00000515911 60 ntBASIC1.56□□□□□ -2.16
ATP2B1P20020 RNU6-971P-201ENST00000516920 106 ntBASIC1.56□□□□□ -2.16
ATP2B1P20020 RNU6-235P-201ENST00000362644 107 ntBASIC1.55□□□□□ -2.16
ATP2B1P20020 SNORD115-2-201ENST00000362842 82 ntBASIC1.55□□□□□ -2.16
ATP2B1P20020 SNORD115-20-201ENST00000365099 82 ntBASIC1.55□□□□□ -2.16
ATP2B1P20020 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.55□□□□□ -2.16
ATP2B1P20020 RNA5SP33-201ENST00000516687 98 ntBASIC1.55□□□□□ -2.16
ATP2B1P20020 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.55□□□□□ -2.16
ATP2B1P20020 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.55□□□□□ -2.16
ATP2B1P20020 RNU1-124P-201ENST00000363861 145 ntBASIC1.54□□□□□ -2.16
ATP2B1P20020 Y_RNA.226-201ENST00000364337 114 ntBASIC1.54□□□□□ -2.16
ATP2B1P20020 RNU6-1165P-201ENST00000410119 107 ntBASIC1.54□□□□□ -2.16
ATP2B1P20020 RNU6-994P-201ENST00000410507 111 ntBASIC1.54□□□□□ -2.16
ATP2B1P20020 RNY4P20-201ENST00000516678 93 ntBASIC1.54□□□□□ -2.16
ATP2B1P20020 IGKV1-22-201ENST00000524313 326 ntBASIC1.54□□□□□ -2.16
ATP2B1P20020 SNORA7.1-201ENST00000363750 139 ntBASIC1.53□□□□□ -2.16
ATP2B1P20020 Y_RNA.470-201ENST00000384307 117 ntBASIC1.53□□□□□ -2.16
ATP2B1P20020 SNORA18-201ENST00000384416 132 ntBASIC1.53□□□□□ -2.16
ATP2B1P20020 Y_RNA.617-201ENST00000410920 90 ntBASIC1.53□□□□□ -2.16
ATP2B1P20020 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.53□□□□□ -2.16
ATP2B1P20020 MIR4421-201ENST00000578133 69 ntBASIC1.53□□□□□ -2.16
ATP2B1P20020 RNU6-94P-201ENST00000607728 107 ntBASIC1.53□□□□□ -2.16
ATP2B1P20020 MIR563-201ENST00000385080 79 ntBASIC1.52□□□□□ -2.17
ATP2B1P20020 Y_RNA.327-201ENST00000365201 102 ntBASIC1.51□□□□□ -2.17
ATP2B1P20020 RNU6-342P-201ENST00000384521 104 ntBASIC1.51□□□□□ -2.17
ATP2B1P20020 RNU6-939P-201ENST00000384634 107 ntBASIC1.51□□□□□ -2.17
ATP2B1P20020 MIR200A-201ENST00000384875 90 ntBASIC1.51□□□□□ -2.17
ATP2B1P20020 MIR1263-201ENST00000408324 86 ntBASIC1.51□□□□□ -2.17
ATP2B1P20020 MIR18B-201ENST00000454574 71 ntBASIC1.51□□□□□ -2.17
ATP2B1P20020 AC067940.1-201ENST00000458411 300 ntBASIC1.51□□□□□ -2.17
ATP2B1P20020 RNU1-123P-201ENST00000458950 160 ntBASIC1.51□□□□□ -2.17
ATP2B1P20020 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.51□□□□□ -2.17
ATP2B1P20020 AL662814.1-201ENST00000617364 121 ntBASIC1.51□□□□□ -2.17
ATP2B1P20020 Y_RNA.299-201ENST00000364973 94 ntBASIC1.5□□□□□ -2.17
ATP2B1P20020 RNU6-934P-201ENST00000365154 107 ntBASIC1.5□□□□□ -2.17
ATP2B1P20020 RNA5SP136-201ENST00000410906 107 ntBASIC1.5□□□□□ -2.17
ATP2B1P20020 RNU6-1061P-201ENST00000516530 99 ntBASIC1.5□□□□□ -2.17
ATP2B1P20020 MIR8070-201ENST00000616510 88 ntBASIC1.5□□□□□ -2.17
ATP2B1P20020 RNU6-80P-201ENST00000384195 107 ntBASIC1.49□□□□□ -2.17
ATP2B1P20020 MIR1287-201ENST00000408492 90 ntBASIC1.49□□□□□ -2.17
ATP2B1P20020 FABP5P4-201ENST00000437203 171 ntBASIC1.49□□□□□ -2.17
ATP2B1P20020 snoU13.21-201ENST00000459368 105 ntBASIC1.49□□□□□ -2.17
ATP2B1P20020 SNORD124-201ENST00000459577 104 ntBASIC1.49□□□□□ -2.17
ATP2B1P20020 RPS23P4-201ENST00000487908 423 ntBASIC1.49□□□□□ -2.17
ATP2B1P20020 RNU6-781P-201ENST00000516377 101 ntBASIC1.49□□□□□ -2.17
ATP2B1P20020 uc_338.6-201ENST00000613544 171 ntBASIC1.49□□□□□ -2.17
ATP2B1P20020 AL157834.3-201ENST00000615543 103 ntBASIC1.49□□□□□ -2.17
ATP2B1P20020 MT-TF-201ENST00000387314 71 ntBASIC1.48□□□□□ -2.17
ATP2B1P20020 MIR758-201ENST00000390227 88 ntBASIC1.48□□□□□ -2.17
ATP2B1P20020 MIR942-201ENST00000401111 86 ntBASIC1.48□□□□□ -2.17
ATP2B1P20020 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.48□□□□□ -2.17
ATP2B1P20020 SNORD83.1-201ENST00000411362 77 ntBASIC1.48□□□□□ -2.17
ATP2B1P20020 AC004223.1-201ENST00000479840 271 ntBASIC1.48□□□□□ -2.17
ATP2B1P20020 AC068338.1-201ENST00000565567 176 ntBASIC1.48□□□□□ -2.17
ATP2B1P20020 MIR3910-1-201ENST00000580936 111 ntBASIC1.48□□□□□ -2.17
ATP2B1P20020 MIR548AE2-201ENST00000583456 67 ntBASIC1.48□□□□□ -2.17
ATP2B1P20020 MIR30D-201ENST00000362283 70 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms