Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 Y_RNA.226-201ENST00000364337 114 ntBASIC1.95□□□□□ -2.1
ERCC3P19447 SNORA2B-201ENST00000384583 137 ntBASIC1.95□□□□□ -2.1
ERCC3P19447 MRPL35P3-201ENST00000421557 364 ntBASIC1.95□□□□□ -2.1
ERCC3P19447 AC113410.1-201ENST00000505029 247 ntBASIC1.95□□□□□ -2.1
ERCC3P19447 RNU11-2P-201ENST00000516898 142 ntBASIC1.95□□□□□ -2.1
ERCC3P19447 RNU6-1258P-201ENST00000516911 111 ntBASIC1.95□□□□□ -2.1
ERCC3P19447 MIR548AI-201ENST00000579940 88 ntBASIC1.95□□□□□ -2.1
ERCC3P19447 MTND5P18-201ENST00000445624 1801 ntBASIC1.94□□□□□ -2.1
ERCC3P19447 SNORA32-201ENST00000384072 121 ntBASIC1.94□□□□□ -2.1
ERCC3P19447 SNORA22C-201ENST00000384614 134 ntBASIC1.94□□□□□ -2.1
ERCC3P19447 RNU6-1168P-201ENST00000390831 104 ntBASIC1.94□□□□□ -2.1
ERCC3P19447 AL591704.2-201ENST00000421658 181 ntBASIC1.94□□□□□ -2.1
ERCC3P19447 RNU6-479P-201ENST00000516348 105 ntBASIC1.94□□□□□ -2.1
ERCC3P19447 MIR6841-201ENST00000637129 72 ntBASIC1.94□□□□□ -2.1
ERCC3P19447 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
ERCC3P19447 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
ERCC3P19447 AL359821.1-201ENST00000605519 182 ntBASIC1.93□□□□□ -2.1
ERCC3P19447 SEPT14P17-201ENST00000617978 177 ntBASIC1.93□□□□□ -2.1
ERCC3P19447 Y_RNA.470-201ENST00000384307 117 ntBASIC1.92□□□□□ -2.1
ERCC3P19447 SNORA18-201ENST00000384416 132 ntBASIC1.92□□□□□ -2.1
ERCC3P19447 SNORA75.2-201ENST00000391138 150 ntBASIC1.92□□□□□ -2.1
ERCC3P19447 SNORA75.3-201ENST00000391231 150 ntBASIC1.92□□□□□ -2.1
ERCC3P19447 AC244023.1-201ENST00000426884 112 ntBASIC1.92□□□□□ -2.1
ERCC3P19447 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.92□□□□□ -2.1
ERCC3P19447 AP003716.2-201ENST00000528260 108 ntBASIC1.92□□□□□ -2.1
ERCC3P19447 MTND5P34-201ENST00000568888 325 ntBASIC1.92□□□□□ -2.1
ERCC3P19447 AC023827.1-201ENST00000569247 97 ntBASIC1.92□□□□□ -2.1
ERCC3P19447 MIR4264-201ENST00000583520 66 ntBASIC1.92□□□□□ -2.1
ERCC3P19447 AC242498.1-201ENST00000604134 111 ntBASIC1.92□□□□□ -2.1
ERCC3P19447 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
ERCC3P19447 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
ERCC3P19447 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
ERCC3P19447 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
ERCC3P19447 RNA5SP327-201ENST00000362494 101 ntBASIC1.91□□□□□ -2.1
ERCC3P19447 SNORD48-201ENST00000364953 64 ntBASIC1.91□□□□□ -2.1
ERCC3P19447 SNORD113-1-201ENST00000365321 69 ntBASIC1.91□□□□□ -2.1
ERCC3P19447 SNORA80D-201ENST00000384488 135 ntBASIC1.91□□□□□ -2.1
ERCC3P19447 RNU6-1104P-201ENST00000384723 104 ntBASIC1.91□□□□□ -2.1
ERCC3P19447 MIR588-201ENST00000384900 83 ntBASIC1.91□□□□□ -2.1
ERCC3P19447 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.91□□□□□ -2.1
ERCC3P19447 RPL39P25-201ENST00000449384 154 ntBASIC1.91□□□□□ -2.1
ERCC3P19447 RNU7-62P-201ENST00000458856 62 ntBASIC1.91□□□□□ -2.1
ERCC3P19447 RNU7-95P-201ENST00000459222 64 ntBASIC1.91□□□□□ -2.1
ERCC3P19447 RNU6-342P-201ENST00000384521 104 ntBASIC1.9□□□□□ -2.11
ERCC3P19447 MIR548A3-201ENST00000385297 97 ntBASIC1.9□□□□□ -2.11
ERCC3P19447 COX6CP6-201ENST00000490840 228 ntBASIC1.9□□□□□ -2.11
ERCC3P19447 TRMT112P2-201ENST00000512910 132 ntBASIC1.9□□□□□ -2.11
ERCC3P19447 RNU7-6P-201ENST00000516845 62 ntBASIC1.9□□□□□ -2.11
ERCC3P19447 Y_RNA.712-201ENST00000517011 92 ntBASIC1.9□□□□□ -2.11
ERCC3P19447 U6.95-201ENST00000636931 70 ntBASIC1.9□□□□□ -2.11
ERCC3P19447 MIR3914-2-201ENST00000637339 95 ntBASIC1.9□□□□□ -2.11
ERCC3P19447 MIR337-201ENST00000362281 93 ntBASIC1.89□□□□□ -2.11
ERCC3P19447 Y_RNA.363-201ENST00000365529 113 ntBASIC1.89□□□□□ -2.11
ERCC3P19447 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.89□□□□□ -2.11
ERCC3P19447 MIR1287-201ENST00000408492 90 ntBASIC1.89□□□□□ -2.11
ERCC3P19447 MIR548AE2-201ENST00000583456 67 ntBASIC1.89□□□□□ -2.11
ERCC3P19447 AL645939.4-201ENST00000604495 135 ntBASIC1.89□□□□□ -2.11
ERCC3P19447 AL512598.1-201ENST00000610158 273 ntBASIC1.89□□□□□ -2.11
ERCC3P19447 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.89□□□□□ -2.11
ERCC3P19447 AC008163.1-202ENST00000636004 2889 ntBASIC1.88□□□□□ -2.11
ERCC3P19447 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
ERCC3P19447 Y_RNA.198-201ENST00000364013 98 ntBASIC1.88□□□□□ -2.11
ERCC3P19447 Y_RNA.299-201ENST00000364973 94 ntBASIC1.88□□□□□ -2.11
ERCC3P19447 RNU6-613P-201ENST00000410412 108 ntBASIC1.88□□□□□ -2.11
ERCC3P19447 RPS29P23-201ENST00000458635 123 ntBASIC1.88□□□□□ -2.11
ERCC3P19447 SNORD33.1-201ENST00000516213 88 ntBASIC1.88□□□□□ -2.11
ERCC3P19447 MIR3618-201ENST00000580330 88 ntBASIC1.88□□□□□ -2.11
ERCC3P19447 MIR548A1-201ENST00000385041 97 ntBASIC1.87□□□□□ -2.11
ERCC3P19447 RNU4-69P-201ENST00000410677 143 ntBASIC1.87□□□□□ -2.11
ERCC3P19447 Y_RNA.649-201ENST00000459077 103 ntBASIC1.87□□□□□ -2.11
ERCC3P19447 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
ERCC3P19447 RNY1P10-201ENST00000363268 113 ntBASIC1.86□□□□□ -2.11
ERCC3P19447 RNU1-42P-201ENST00000364033 160 ntBASIC1.86□□□□□ -2.11
ERCC3P19447 RNA5SP363-201ENST00000365072 115 ntBASIC1.86□□□□□ -2.11
ERCC3P19447 MT-TN-201ENST00000387400 73 ntBASIC1.86□□□□□ -2.11
ERCC3P19447 SNORD77B-201ENST00000391112 67 ntBASIC1.86□□□□□ -2.11
ERCC3P19447 RNU6-1086P-201ENST00000410930 100 ntBASIC1.86□□□□□ -2.11
ERCC3P19447 RNU7-90P-201ENST00000459216 62 ntBASIC1.86□□□□□ -2.11
ERCC3P19447 RPS23P4-201ENST00000487908 423 ntBASIC1.86□□□□□ -2.11
ERCC3P19447 AC019288.1-201ENST00000557918 224 ntBASIC1.86□□□□□ -2.11
ERCC3P19447 SNORD53B-201ENST00000577887 78 ntBASIC1.86□□□□□ -2.11
ERCC3P19447 MIR3163-201ENST00000581592 73 ntBASIC1.86□□□□□ -2.11
ERCC3P19447 RNA5SP205-201ENST00000364653 136 ntBASIC1.85□□□□□ -2.11
ERCC3P19447 RNU6-60P-201ENST00000364792 103 ntBASIC1.85□□□□□ -2.11
ERCC3P19447 SNORA25-201ENST00000384384 134 ntBASIC1.85□□□□□ -2.11
ERCC3P19447 snoU13.2-201ENST00000459201 104 ntBASIC1.85□□□□□ -2.11
ERCC3P19447 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.85□□□□□ -2.11
ERCC3P19447 SNORD79.1-201ENST00000516069 84 ntBASIC1.85□□□□□ -2.11
ERCC3P19447 AL670379.3-201ENST00000605040 251 ntBASIC1.85□□□□□ -2.11
ERCC3P19447 MIR8070-201ENST00000616510 88 ntBASIC1.85□□□□□ -2.11
ERCC3P19447 MIR6740-201ENST00000618268 113 ntBASIC1.85□□□□□ -2.11
ERCC3P19447 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.84□□□□□ -2.11
ERCC3P19447 MIR26B-201ENST00000362251 77 ntBASIC1.84□□□□□ -2.11
ERCC3P19447 SNORD113.3-201ENST00000364630 78 ntBASIC1.84□□□□□ -2.11
ERCC3P19447 MIRLET7F2-201ENST00000385277 83 ntBASIC1.84□□□□□ -2.11
ERCC3P19447 MIR548I2-201ENST00000408348 149 ntBASIC1.84□□□□□ -2.11
ERCC3P19447 RNU6-994P-201ENST00000410507 111 ntBASIC1.84□□□□□ -2.11
ERCC3P19447 RNU7-21P-201ENST00000459430 62 ntBASIC1.84□□□□□ -2.11
ERCC3P19447 SNORD115-2-201ENST00000362842 82 ntBASIC1.83□□□□□ -2.12
ERCC3P19447 Y_RNA.291-201ENST00000364886 113 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms