Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC008834.1-201ENST00000511612 175 ntBASIC1.81□□□□□ -2.12
COL6A2P12110 AP003716.2-201ENST00000528260 108 ntBASIC1.81□□□□□ -2.12
COL6A2P12110 MIR4419B-201ENST00000577260 68 ntBASIC1.81□□□□□ -2.12
COL6A2P12110 MIR3618-201ENST00000580330 88 ntBASIC1.81□□□□□ -2.12
COL6A2P12110 SNORD38B-202ENST00000625943 69 ntBASIC1.81□□□□□ -2.12
COL6A2P12110 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
COL6A2P12110 Y_RNA.163-201ENST00000363702 113 ntBASIC1.8□□□□□ -2.12
COL6A2P12110 RNU1-78P-201ENST00000391248 165 ntBASIC1.8□□□□□ -2.12
COL6A2P12110 AC019129.1-201ENST00000403786 261 ntBASIC1.8□□□□□ -2.12
COL6A2P12110 MIR1302-5-201ENST00000408164 150 ntBASIC1.8□□□□□ -2.12
COL6A2P12110 AC090844.1-201ENST00000422019 156 ntBASIC1.8□□□□□ -2.12
COL6A2P12110 RPL39P39-201ENST00000455840 151 ntBASIC1.8□□□□□ -2.12
COL6A2P12110 MIR1270-201ENST00000459320 83 ntBASIC1.8□□□□□ -2.12
COL6A2P12110 RPL30P7-201ENST00000479312 323 ntBASIC1.8□□□□□ -2.12
COL6A2P12110 PRELID3BP2-201ENST00000605362 201 ntBASIC1.8□□□□□ -2.12
COL6A2P12110 uc_338.28-201ENST00000612082 187 ntBASIC1.8□□□□□ -2.12
COL6A2P12110 AP000648.3-201ENST00000623539 4507 ntBASIC1.79□□□□□ -2.12
COL6A2P12110 SNORD77B-201ENST00000391112 67 ntBASIC1.79□□□□□ -2.12
COL6A2P12110 MIR1302-7-201ENST00000408841 72 ntBASIC1.79□□□□□ -2.12
COL6A2P12110 snoU13.25-201ENST00000458945 104 ntBASIC1.79□□□□□ -2.12
COL6A2P12110 RNU7-35P-201ENST00000517174 62 ntBASIC1.79□□□□□ -2.12
COL6A2P12110 AP000942.3-201ENST00000603702 160 ntBASIC1.79□□□□□ -2.12
COL6A2P12110 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
COL6A2P12110 RNU6-363P-201ENST00000362895 105 ntBASIC1.78□□□□□ -2.12
COL6A2P12110 Y_RNA.140-201ENST00000363474 103 ntBASIC1.78□□□□□ -2.12
COL6A2P12110 SNORD48-201ENST00000364953 64 ntBASIC1.78□□□□□ -2.12
COL6A2P12110 RNU6-1065P-201ENST00000384513 106 ntBASIC1.78□□□□□ -2.12
COL6A2P12110 MIR934-201ENST00000401241 83 ntBASIC1.78□□□□□ -2.12
COL6A2P12110 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.78□□□□□ -2.12
COL6A2P12110 RNA5SP182-201ENST00000516064 82 ntBASIC1.78□□□□□ -2.12
COL6A2P12110 RNU11-2P-201ENST00000516898 142 ntBASIC1.78□□□□□ -2.12
COL6A2P12110 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.78□□□□□ -2.12
COL6A2P12110 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.78□□□□□ -2.12
COL6A2P12110 MIR3664-201ENST00000579074 99 ntBASIC1.78□□□□□ -2.12
COL6A2P12110 Y_RNA.773-201ENST00000607168 90 ntBASIC1.78□□□□□ -2.12
COL6A2P12110 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
COL6A2P12110 Y_RNA.78-201ENST00000362970 110 ntBASIC1.77□□□□□ -2.13
COL6A2P12110 RNU6-1113P-201ENST00000384348 107 ntBASIC1.77□□□□□ -2.13
COL6A2P12110 RNU6-816P-201ENST00000390914 107 ntBASIC1.77□□□□□ -2.13
COL6A2P12110 RNU6-1268P-201ENST00000391214 107 ntBASIC1.77□□□□□ -2.13
COL6A2P12110 RNU6-1239P-201ENST00000391310 107 ntBASIC1.77□□□□□ -2.13
COL6A2P12110 AC245047.7-201ENST00000440265 293 ntBASIC1.77□□□□□ -2.13
COL6A2P12110 MIR4285-201ENST00000581001 85 ntBASIC1.77□□□□□ -2.13
COL6A2P12110 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.77□□□□□ -2.13
COL6A2P12110 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
COL6A2P12110 RNU6-766P-201ENST00000362478 107 ntBASIC1.76□□□□□ -2.13
COL6A2P12110 RNA5SP363-201ENST00000365072 115 ntBASIC1.76□□□□□ -2.13
COL6A2P12110 Y_RNA.328-201ENST00000365208 113 ntBASIC1.76□□□□□ -2.13
COL6A2P12110 Y_RNA.507-201ENST00000384500 99 ntBASIC1.76□□□□□ -2.13
COL6A2P12110 RNU6-1086P-201ENST00000410930 100 ntBASIC1.76□□□□□ -2.13
COL6A2P12110 AC244023.1-201ENST00000426884 112 ntBASIC1.76□□□□□ -2.13
COL6A2P12110 AC245517.4-201ENST00000448601 281 ntBASIC1.76□□□□□ -2.13
COL6A2P12110 RNU6-970P-201ENST00000516312 107 ntBASIC1.76□□□□□ -2.13
COL6A2P12110 RNU6-295P-201ENST00000516901 104 ntBASIC1.76□□□□□ -2.13
COL6A2P12110 AC242498.1-201ENST00000604134 111 ntBASIC1.76□□□□□ -2.13
COL6A2P12110 MIR7111-201ENST00000619751 72 ntBASIC1.76□□□□□ -2.13
COL6A2P12110 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
COL6A2P12110 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
COL6A2P12110 Y_RNA.226-201ENST00000364337 114 ntBASIC1.75□□□□□ -2.13
COL6A2P12110 RNU6-396P-201ENST00000365369 105 ntBASIC1.75□□□□□ -2.13
COL6A2P12110 RNU6-32P-201ENST00000383948 107 ntBASIC1.75□□□□□ -2.13
COL6A2P12110 RNU6-13P-201ENST00000384248 107 ntBASIC1.75□□□□□ -2.13
COL6A2P12110 SNORA18-201ENST00000384416 132 ntBASIC1.75□□□□□ -2.13
COL6A2P12110 RNU6-342P-201ENST00000384521 104 ntBASIC1.75□□□□□ -2.13
COL6A2P12110 RNU6-12P-201ENST00000384604 107 ntBASIC1.75□□□□□ -2.13
COL6A2P12110 RNU6-41P-201ENST00000384741 107 ntBASIC1.75□□□□□ -2.13
COL6A2P12110 MIR583-201ENST00000384846 75 ntBASIC1.75□□□□□ -2.13
COL6A2P12110 RPL39P25-201ENST00000449384 154 ntBASIC1.75□□□□□ -2.13
COL6A2P12110 RNU6-947P-201ENST00000516264 106 ntBASIC1.75□□□□□ -2.13
COL6A2P12110 MIR4422-201ENST00000581938 83 ntBASIC1.75□□□□□ -2.13
COL6A2P12110 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.75□□□□□ -2.13
COL6A2P12110 MIR1255B1-201ENST00000636325 63 ntBASIC1.75□□□□□ -2.13
COL6A2P12110 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.75□□□□□ -2.13
COL6A2P12110 MIR450A1-201ENST00000362262 91 ntBASIC1.74□□□□□ -2.13
COL6A2P12110 RNU6-756P-201ENST00000383997 107 ntBASIC1.74□□□□□ -2.13
COL6A2P12110 SNORA32-201ENST00000384072 121 ntBASIC1.74□□□□□ -2.13
COL6A2P12110 SNORA51.5-201ENST00000384126 131 ntBASIC1.74□□□□□ -2.13
COL6A2P12110 RNU6-616P-201ENST00000384353 107 ntBASIC1.74□□□□□ -2.13
COL6A2P12110 MT-TN-201ENST00000387400 73 ntBASIC1.74□□□□□ -2.13
COL6A2P12110 AL445685.2-201ENST00000422551 342 ntBASIC1.74□□□□□ -2.13
COL6A2P12110 AC019176.1-201ENST00000518519 225 ntBASIC1.74□□□□□ -2.13
COL6A2P12110 AL512310.8-201ENST00000550183 120 ntBASIC1.74□□□□□ -2.13
COL6A2P12110 MIR3937-201ENST00000580135 106 ntBASIC1.74□□□□□ -2.13
COL6A2P12110 FAM71BP1-201ENST00000604431 523 ntBASIC1.74□□□□□ -2.13
COL6A2P12110 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.74□□□□□ -2.13
COL6A2P12110 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
COL6A2P12110 RNU4-67P-201ENST00000364569 141 ntBASIC1.73□□□□□ -2.13
COL6A2P12110 RNU6-168P-201ENST00000516189 101 ntBASIC1.73□□□□□ -2.13
COL6A2P12110 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.73□□□□□ -2.13
COL6A2P12110 RNU6-1018P-201ENST00000516577 106 ntBASIC1.73□□□□□ -2.13
COL6A2P12110 RNA5SP264-201ENST00000363115 107 ntBASIC1.72□□□□□ -2.13
COL6A2P12110 SNORA25.3-201ENST00000363205 127 ntBASIC1.72□□□□□ -2.13
COL6A2P12110 RNU6-409P-201ENST00000384114 104 ntBASIC1.72□□□□□ -2.13
COL6A2P12110 Y_RNA.495-201ENST00000384435 112 ntBASIC1.72□□□□□ -2.13
COL6A2P12110 MIR9-3-201ENST00000385084 90 ntBASIC1.72□□□□□ -2.13
COL6A2P12110 U8.13-201ENST00000390842 128 ntBASIC1.72□□□□□ -2.13
COL6A2P12110 SNORA26.9-201ENST00000391322 122 ntBASIC1.72□□□□□ -2.13
COL6A2P12110 MIR1185-1-201ENST00000408598 86 ntBASIC1.72□□□□□ -2.13
COL6A2P12110 RNU6-1054P-201ENST00000411293 104 ntBASIC1.72□□□□□ -2.13
COL6A2P12110 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 1395.8 ms