Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 AC044792.1-201ENST00000593294 196 ntBASIC0.11□□□□□ -2.39
IGHV3-43DP0DP04 AC021613.1-201ENST00000623880 111 ntBASIC0.11□□□□□ -2.39
IGHV3-43DP0DP04 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
IGHV3-43DP0DP04 RNU6-1099P-201ENST00000363533 107 ntBASIC0.1□□□□□ -2.39
IGHV3-43DP0DP04 RNU6-815P-201ENST00000384080 113 ntBASIC0.1□□□□□ -2.39
IGHV3-43DP0DP04 MIR518E-201ENST00000385252 88 ntBASIC0.1□□□□□ -2.39
IGHV3-43DP0DP04 Y_RNA.588-201ENST00000391254 102 ntBASIC0.1□□□□□ -2.39
IGHV3-43DP0DP04 MIR1302-6-201ENST00000408466 90 ntBASIC0.1□□□□□ -2.39
IGHV3-43DP0DP04 RNU4-43P-201ENST00000410628 137 ntBASIC0.1□□□□□ -2.39
IGHV3-43DP0DP04 RNA5SP268-201ENST00000516828 124 ntBASIC0.1□□□□□ -2.39
IGHV3-43DP0DP04 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.1□□□□□ -2.39
IGHV3-43DP0DP04 MIR6841-201ENST00000637129 72 ntBASIC0.1□□□□□ -2.39
IGHV3-43DP0DP04 Y_RNA.32-201ENST00000362589 110 ntBASIC0.09□□□□□ -2.4
IGHV3-43DP0DP04 RNU6-238P-201ENST00000363313 106 ntBASIC0.09□□□□□ -2.4
IGHV3-43DP0DP04 SNORD114-23-201ENST00000363536 72 ntBASIC0.09□□□□□ -2.4
IGHV3-43DP0DP04 RNU6-103P-201ENST00000363686 107 ntBASIC0.09□□□□□ -2.4
IGHV3-43DP0DP04 Y_RNA.262-201ENST00000364641 102 ntBASIC0.09□□□□□ -2.4
IGHV3-43DP0DP04 Y_RNA.461-201ENST00000384263 103 ntBASIC0.09□□□□□ -2.4
IGHV3-43DP0DP04 Y_RNA.483-201ENST00000384380 101 ntBASIC0.09□□□□□ -2.4
IGHV3-43DP0DP04 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
IGHV3-43DP0DP04 AL121914.1-201ENST00000450188 156 ntBASIC0.09□□□□□ -2.4
IGHV3-43DP0DP04 RNU6-765P-201ENST00000516916 99 ntBASIC0.09□□□□□ -2.4
IGHV3-43DP0DP04 AC069113.3-201ENST00000521019 150 ntBASIC0.09□□□□□ -2.4
IGHV3-43DP0DP04 AC112693.2-201ENST00000556538 232 ntBASIC0.09□□□□□ -2.4
IGHV3-43DP0DP04 MIR4491-201ENST00000581087 68 ntBASIC0.09□□□□□ -2.4
IGHV3-43DP0DP04 MIR924-201ENST00000638017 53 ntBASIC0.09□□□□□ -2.4
IGHV3-43DP0DP04 Y_RNA.174-201ENST00000363781 105 ntBASIC0.08□□□□□ -2.4
IGHV3-43DP0DP04 RNU6-949P-201ENST00000384040 107 ntBASIC0.08□□□□□ -2.4
IGHV3-43DP0DP04 SNORA18-201ENST00000384416 132 ntBASIC0.08□□□□□ -2.4
IGHV3-43DP0DP04 MT-TW-201ENST00000387382 68 ntBASIC0.08□□□□□ -2.4
IGHV3-43DP0DP04 RNA5SP299-201ENST00000391203 116 ntBASIC0.08□□□□□ -2.4
IGHV3-43DP0DP04 RNU2-59P-201ENST00000410482 191 ntBASIC0.08□□□□□ -2.4
IGHV3-43DP0DP04 MTATP8P1-201ENST00000467115 207 ntBASIC0.08□□□□□ -2.4
IGHV3-43DP0DP04 SNORD116-25-201ENST00000516517 92 ntBASIC0.08□□□□□ -2.4
IGHV3-43DP0DP04 SNORA31.14-201ENST00000516728 116 ntBASIC0.08□□□□□ -2.4
IGHV3-43DP0DP04 AL442067.1-201ENST00000613261 223 ntBASIC0.08□□□□□ -2.4
IGHV3-43DP0DP04 MIR8062-201ENST00000621515 85 ntBASIC0.08□□□□□ -2.4
IGHV3-43DP0DP04 MIR4315-1-201ENST00000636800 73 ntBASIC0.08□□□□□ -2.4
IGHV3-43DP0DP04 MIR4315-2-201ENST00000640925 73 ntBASIC0.08□□□□□ -2.4
IGHV3-43DP0DP04 RNU6-1229P-201ENST00000364295 107 ntBASIC0.07□□□□□ -2.4
IGHV3-43DP0DP04 RNU4-16P-201ENST00000364737 141 ntBASIC0.07□□□□□ -2.4
IGHV3-43DP0DP04 SUMO1P3-201ENST00000439961 304 ntBASIC0.07□□□□□ -2.4
IGHV3-43DP0DP04 RNU6-135P-201ENST00000516769 101 ntBASIC0.07□□□□□ -2.4
IGHV3-43DP0DP04 MIR4744-201ENST00000581563 82 ntBASIC0.07□□□□□ -2.4
IGHV3-43DP0DP04 Y_RNA.54-201ENST00000362766 105 ntBASIC0.06□□□□□ -2.4
IGHV3-43DP0DP04 MIR598-201ENST00000384868 97 ntBASIC0.06□□□□□ -2.4
IGHV3-43DP0DP04 RNU5E-9P-201ENST00000411164 104 ntBASIC0.06□□□□□ -2.4
IGHV3-43DP0DP04 AC096949.1-201ENST00000412047 152 ntBASIC0.06□□□□□ -2.4
IGHV3-43DP0DP04 RNA5SP227-201ENST00000516184 113 ntBASIC0.06□□□□□ -2.4
IGHV3-43DP0DP04 Y_RNA.697-201ENST00000516776 113 ntBASIC0.06□□□□□ -2.4
IGHV3-43DP0DP04 MIR378D2-201ENST00000580636 98 ntBASIC0.06□□□□□ -2.4
IGHV3-43DP0DP04 MIR4514-201ENST00000581410 57 ntBASIC0.06□□□□□ -2.4
IGHV3-43DP0DP04 MIR7107-201ENST00000611489 80 ntBASIC0.06□□□□□ -2.4
IGHV3-43DP0DP04 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.05□□□□□ -2.4
IGHV3-43DP0DP04 RNU6-978P-201ENST00000364371 103 ntBASIC0.05□□□□□ -2.4
IGHV3-43DP0DP04 Y_RNA.352-201ENST00000365439 102 ntBASIC0.05□□□□□ -2.4
IGHV3-43DP0DP04 RNU6-1227P-201ENST00000383981 107 ntBASIC0.05□□□□□ -2.4
IGHV3-43DP0DP04 Y_RNA.515-201ENST00000384535 112 ntBASIC0.05□□□□□ -2.4
IGHV3-43DP0DP04 Y_RNA.536-201ENST00000384621 113 ntBASIC0.05□□□□□ -2.4
IGHV3-43DP0DP04 Y_RNA.539-201ENST00000384635 107 ntBASIC0.05□□□□□ -2.4
IGHV3-43DP0DP04 RNU6-291P-201ENST00000384720 107 ntBASIC0.05□□□□□ -2.4
IGHV3-43DP0DP04 RNU6-535P-201ENST00000384722 107 ntBASIC0.05□□□□□ -2.4
IGHV3-43DP0DP04 Y_RNA.604-201ENST00000410574 102 ntBASIC0.05□□□□□ -2.4
IGHV3-43DP0DP04 RNA5SP127-201ENST00000411051 133 ntBASIC0.05□□□□□ -2.4
IGHV3-43DP0DP04 AC069271.1-201ENST00000445577 156 ntBASIC0.05□□□□□ -2.4
IGHV3-43DP0DP04 RNU6-893P-201ENST00000458841 100 ntBASIC0.05□□□□□ -2.4
IGHV3-43DP0DP04 SNORA25.16-201ENST00000516741 121 ntBASIC0.05□□□□□ -2.4
IGHV3-43DP0DP04 RNU6-1153P-201ENST00000516760 105 ntBASIC0.05□□□□□ -2.4
IGHV3-43DP0DP04 RNU6-1149P-201ENST00000516810 97 ntBASIC0.05□□□□□ -2.4
IGHV3-43DP0DP04 SCARNA16.5-201ENST00000517114 183 ntBASIC0.05□□□□□ -2.4
IGHV3-43DP0DP04 MTND5P34-201ENST00000568888 325 ntBASIC0.05□□□□□ -2.4
IGHV3-43DP0DP04 RNY1-201ENST00000364228 113 ntBASIC0.04□□□□□ -2.4
IGHV3-43DP0DP04 RNY1P13-201ENST00000365030 105 ntBASIC0.04□□□□□ -2.4
IGHV3-43DP0DP04 Y_RNA.422-201ENST00000384054 114 ntBASIC0.04□□□□□ -2.4
IGHV3-43DP0DP04 Y_RNA.574-201ENST00000384766 95 ntBASIC0.04□□□□□ -2.4
IGHV3-43DP0DP04 SCARNA15-202ENST00000516881 127 ntBASIC0.04□□□□□ -2.4
IGHV3-43DP0DP04 Y_RNA.720-201ENST00000517166 92 ntBASIC0.04□□□□□ -2.4
IGHV3-43DP0DP04 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.04□□□□□ -2.4
IGHV3-43DP0DP04 MIR4643-201ENST00000577473 78 ntBASIC0.04□□□□□ -2.4
IGHV3-43DP0DP04 SNORA9.1-201ENST00000362412 131 ntBASIC0.03□□□□□ -2.4
IGHV3-43DP0DP04 Y_RNA.277-201ENST00000364754 102 ntBASIC0.03□□□□□ -2.4
IGHV3-43DP0DP04 Y_RNA.292-201ENST00000364904 97 ntBASIC0.03□□□□□ -2.4
IGHV3-43DP0DP04 Y_RNA.518-201ENST00000384552 113 ntBASIC0.03□□□□□ -2.4
IGHV3-43DP0DP04 MIR624-201ENST00000385217 97 ntBASIC0.03□□□□□ -2.4
IGHV3-43DP0DP04 RNU6-578P-201ENST00000390980 103 ntBASIC0.03□□□□□ -2.4
IGHV3-43DP0DP04 MIR6828-201ENST00000636181 60 ntBASIC0.03□□□□□ -2.4
IGHV3-43DP0DP04 AC091304.10-201ENST00000641554 121 ntBASIC0.03□□□□□ -2.4
IGHV3-43DP0DP04 MTND5P32-201ENST00000560711 1802 ntBASIC0.02□□□□□ -2.41
IGHV3-43DP0DP04 Y_RNA.76-201ENST00000362931 109 ntBASIC0.02□□□□□ -2.41
IGHV3-43DP0DP04 Y_RNA.269-201ENST00000364685 89 ntBASIC0.02□□□□□ -2.41
IGHV3-43DP0DP04 Y_RNA.308-201ENST00000365043 101 ntBASIC0.02□□□□□ -2.41
IGHV3-43DP0DP04 Y_RNA.423-201ENST00000384057 113 ntBASIC0.02□□□□□ -2.41
IGHV3-43DP0DP04 RNU6-472P-201ENST00000384299 107 ntBASIC0.02□□□□□ -2.41
IGHV3-43DP0DP04 SNORD28-201ENST00000384706 75 ntBASIC0.02□□□□□ -2.41
IGHV3-43DP0DP04 RNU6-1086P-201ENST00000410930 100 ntBASIC0.02□□□□□ -2.41
IGHV3-43DP0DP04 Y_RNA.797-201ENST00000515977 94 ntBASIC0.02□□□□□ -2.41
IGHV3-43DP0DP04 RNU6-1194P-201ENST00000516208 104 ntBASIC0.02□□□□□ -2.41
IGHV3-43DP0DP04 RNY3P16-201ENST00000516338 101 ntBASIC0.02□□□□□ -2.41
IGHV3-43DP0DP04 RNA5SP47-201ENST00000517230 109 ntBASIC0.02□□□□□ -2.41
IGHV3-43DP0DP04 DEFB131E-201ENST00000532329 154 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms