Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC112487.2-201ENST00000637950 304 ntBASIC-0.6□□□□□ -2.51
UBCP0CG48 MIR101-2-201ENST00000362195 79 ntBASIC-0.61□□□□□ -2.51
UBCP0CG48 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.61□□□□□ -2.51
UBCP0CG48 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.61□□□□□ -2.51
UBCP0CG48 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.61□□□□□ -2.51
UBCP0CG48 SNORD14C-201ENST00000365382 88 ntBASIC-0.61□□□□□ -2.51
UBCP0CG48 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.61□□□□□ -2.51
UBCP0CG48 MIR626-201ENST00000385032 94 ntBASIC-0.61□□□□□ -2.51
UBCP0CG48 SNORA53-201ENST00000391141 249 ntBASIC-0.61□□□□□ -2.51
UBCP0CG48 AC108059.2-201ENST00000434626 151 ntBASIC-0.61□□□□□ -2.51
UBCP0CG48 SNRPGP8-201ENST00000454064 226 ntBASIC-0.61□□□□□ -2.51
UBCP0CG48 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.61□□□□□ -2.51
UBCP0CG48 SNORD19B-201ENST00000459623 84 ntBASIC-0.61□□□□□ -2.51
UBCP0CG48 SNORA27.4-201ENST00000516650 95 ntBASIC-0.61□□□□□ -2.51
UBCP0CG48 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
UBCP0CG48 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.61□□□□□ -2.51
UBCP0CG48 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.61□□□□□ -2.51
UBCP0CG48 MIR148A-201ENST00000362215 68 ntBASIC-0.62□□□□□ -2.51
UBCP0CG48 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.62□□□□□ -2.51
UBCP0CG48 RNA5SP133-201ENST00000363368 119 ntBASIC-0.62□□□□□ -2.51
UBCP0CG48 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.62□□□□□ -2.51
UBCP0CG48 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.62□□□□□ -2.51
UBCP0CG48 RNU6-702P-201ENST00000364982 107 ntBASIC-0.62□□□□□ -2.51
UBCP0CG48 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.62□□□□□ -2.51
UBCP0CG48 RNU7-161P-201ENST00000517289 62 ntBASIC-0.62□□□□□ -2.51
UBCP0CG48 MIR3129-201ENST00000581095 76 ntBASIC-0.62□□□□□ -2.51
UBCP0CG48 AL132765.2-201ENST00000610812 351 ntBASIC-0.62□□□□□ -2.51
UBCP0CG48 AC090574.1-201ENST00000623186 233 ntBASIC-0.62□□□□□ -2.51
UBCP0CG48 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.63□□□□□ -2.51
UBCP0CG48 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.63□□□□□ -2.51
UBCP0CG48 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.63□□□□□ -2.51
UBCP0CG48 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
UBCP0CG48 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.63□□□□□ -2.51
UBCP0CG48 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.63□□□□□ -2.51
UBCP0CG48 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.63□□□□□ -2.51
UBCP0CG48 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.63□□□□□ -2.51
UBCP0CG48 SNORD126-201ENST00000459475 77 ntBASIC-0.63□□□□□ -2.51
UBCP0CG48 RNU7-79P-201ENST00000516082 62 ntBASIC-0.63□□□□□ -2.51
UBCP0CG48 RNU7-70P-201ENST00000516941 66 ntBASIC-0.63□□□□□ -2.51
UBCP0CG48 U6atac.1-201ENST00000616025 117 ntBASIC-0.63□□□□□ -2.51
UBCP0CG48 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
UBCP0CG48 SNORD41.1-201ENST00000391000 69 ntBASIC-0.64□□□□□ -2.51
UBCP0CG48 RNA5SP300-201ENST00000391197 107 ntBASIC-0.64□□□□□ -2.51
UBCP0CG48 RPL21P38-201ENST00000418090 167 ntBASIC-0.64□□□□□ -2.51
UBCP0CG48 TRBVB-201ENST00000477100 408 ntBASIC-0.64□□□□□ -2.51
UBCP0CG48 RNU6-897P-201ENST00000517135 105 ntBASIC-0.64□□□□□ -2.51
UBCP0CG48 AC093783.1-201ENST00000612976 329 ntBASIC-0.64□□□□□ -2.51
UBCP0CG48 AL109933.3-201ENST00000619095 188 ntBASIC-0.64□□□□□ -2.51
UBCP0CG48 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.65□□□□□ -2.51
UBCP0CG48 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.65□□□□□ -2.51
UBCP0CG48 AC109327.2-201ENST00000448339 378 ntBASIC-0.65□□□□□ -2.51
UBCP0CG48 RNU7-104P-201ENST00000459398 79 ntBASIC-0.65□□□□□ -2.51
UBCP0CG48 AC011921.3-201ENST00000605540 361 ntBASIC-0.65□□□□□ -2.51
UBCP0CG48 MTND5P32-201ENST00000560711 1802 ntBASIC-0.66□□□□□ -2.51
UBCP0CG48 RNU4-73P-201ENST00000363164 141 ntBASIC-0.66□□□□□ -2.52
UBCP0CG48 RNA5SP403-201ENST00000363598 108 ntBASIC-0.66□□□□□ -2.52
UBCP0CG48 SNORD49B-201ENST00000365172 72 ntBASIC-0.66□□□□□ -2.52
UBCP0CG48 RNU4-70P-201ENST00000384579 139 ntBASIC-0.66□□□□□ -2.52
UBCP0CG48 MIR329-2-201ENST00000385029 84 ntBASIC-0.66□□□□□ -2.52
UBCP0CG48 MT-TT-201ENST00000387460 66 ntBASIC-0.66□□□□□ -2.52
UBCP0CG48 AC138393.2-201ENST00000414742 246 ntBASIC-0.66□□□□□ -2.52
UBCP0CG48 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.66□□□□□ -2.52
UBCP0CG48 RNU7-35P-201ENST00000517174 62 ntBASIC-0.66□□□□□ -2.52
UBCP0CG48 IGLVI-20-201ENST00000519296 130 ntBASIC-0.66□□□□□ -2.52
UBCP0CG48 AL365205.2-201ENST00000594586 68 ntBASIC-0.66□□□□□ -2.52
UBCP0CG48 U6.109-201ENST00000636749 87 ntBASIC-0.66□□□□□ -2.52
UBCP0CG48 UBE2WP1-201ENST00000362030 340 ntBASIC-0.67□□□□□ -2.52
UBCP0CG48 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.67□□□□□ -2.52
UBCP0CG48 RNU6-211P-201ENST00000384047 107 ntBASIC-0.67□□□□□ -2.52
UBCP0CG48 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.67□□□□□ -2.52
UBCP0CG48 MIR876-201ENST00000401147 81 ntBASIC-0.67□□□□□ -2.52
UBCP0CG48 SNORD114-31-201ENST00000363219 75 ntBASIC-0.68□□□□□ -2.52
UBCP0CG48 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.68□□□□□ -2.52
UBCP0CG48 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.68□□□□□ -2.52
UBCP0CG48 AL606845.1-201ENST00000404881 255 ntBASIC-0.68□□□□□ -2.52
UBCP0CG48 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.68□□□□□ -2.52
UBCP0CG48 MIR4645-201ENST00000583158 77 ntBASIC-0.68□□□□□ -2.52
UBCP0CG48 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.68□□□□□ -2.52
UBCP0CG48 RNU4-40P-201ENST00000364351 143 ntBASIC-0.69□□□□□ -2.52
UBCP0CG48 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.69□□□□□ -2.52
UBCP0CG48 RNU6-121P-201ENST00000410525 99 ntBASIC-0.69□□□□□ -2.52
UBCP0CG48 FGF7P4-201ENST00000509595 295 ntBASIC-0.69□□□□□ -2.52
UBCP0CG48 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.69□□□□□ -2.52
UBCP0CG48 MIR548H5-201ENST00000580314 60 ntBASIC-0.69□□□□□ -2.52
UBCP0CG48 MIR4263-201ENST00000584745 83 ntBASIC-0.69□□□□□ -2.52
UBCP0CG48 AC084368.1-201ENST00000620935 65 ntBASIC-0.69□□□□□ -2.52
UBCP0CG48 AL162726.3-218ENST00000636401 95 ntBASIC-0.69□□□□□ -2.52
UBCP0CG48 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.7□□□□□ -2.52
UBCP0CG48 SNORD114-28-201ENST00000363610 72 ntBASIC-0.7□□□□□ -2.52
UBCP0CG48 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.7□□□□□ -2.52
UBCP0CG48 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.7□□□□□ -2.52
UBCP0CG48 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.7□□□□□ -2.52
UBCP0CG48 MIR196A2-201ENST00000385189 110 ntBASIC-0.7□□□□□ -2.52
UBCP0CG48 MIR616-201ENST00000385293 97 ntBASIC-0.7□□□□□ -2.52
UBCP0CG48 SNORD110-201ENST00000408189 75 ntBASIC-0.7□□□□□ -2.52
UBCP0CG48 AC006210.1-201ENST00000424882 111 ntBASIC-0.7□□□□□ -2.52
UBCP0CG48 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.7□□□□□ -2.52
UBCP0CG48 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.7□□□□□ -2.52
UBCP0CG48 AC098479.1-201ENST00000609225 154 ntBASIC-0.7□□□□□ -2.52
UBCP0CG48 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms