Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RNU7-164P-201ENST00000459221 62 ntBASIC1.37□□□□□ -2.19
HOXC6P09630 RNU6-322P-201ENST00000516010 103 ntBASIC1.37□□□□□ -2.19
HOXC6P09630 SNORD33.1-201ENST00000516213 88 ntBASIC1.37□□□□□ -2.19
HOXC6P09630 RNY4P20-201ENST00000516678 93 ntBASIC1.37□□□□□ -2.19
HOXC6P09630 RNU6-1258P-201ENST00000516911 111 ntBASIC1.37□□□□□ -2.19
HOXC6P09630 MTND5P34-201ENST00000568888 325 ntBASIC1.37□□□□□ -2.19
HOXC6P09630 AC021443.1-201ENST00000604478 211 ntBASIC1.37□□□□□ -2.19
HOXC6P09630 AL096861.1-201ENST00000610899 123 ntBASIC1.37□□□□□ -2.19
HOXC6P09630 AC008133.2-201ENST00000624540 351 ntBASIC1.37□□□□□ -2.19
HOXC6P09630 MIR302D-201ENST00000362275 68 ntBASIC1.36□□□□□ -2.19
HOXC6P09630 SNORD114-27-201ENST00000363766 70 ntBASIC1.36□□□□□ -2.19
HOXC6P09630 Y_RNA.353-201ENST00000365440 108 ntBASIC1.36□□□□□ -2.19
HOXC6P09630 RNU6-429P-201ENST00000384582 108 ntBASIC1.36□□□□□ -2.19
HOXC6P09630 Y_RNA.563-201ENST00000384707 108 ntBASIC1.36□□□□□ -2.19
HOXC6P09630 SNORA26.6-201ENST00000391256 115 ntBASIC1.36□□□□□ -2.19
HOXC6P09630 snoU13.25-201ENST00000458945 104 ntBASIC1.36□□□□□ -2.19
HOXC6P09630 RNU7-123P-201ENST00000515911 60 ntBASIC1.36□□□□□ -2.19
HOXC6P09630 RNU7-43P-201ENST00000516554 64 ntBASIC1.36□□□□□ -2.19
HOXC6P09630 AC022523.2-201ENST00000561045 150 ntBASIC1.36□□□□□ -2.19
HOXC6P09630 MIR548AO-201ENST00000579992 96 ntBASIC1.36□□□□□ -2.19
HOXC6P09630 MIR4422-201ENST00000581938 83 ntBASIC1.36□□□□□ -2.19
HOXC6P09630 MIR4305-201ENST00000583252 102 ntBASIC1.36□□□□□ -2.19
HOXC6P09630 AL513534.2-201ENST00000603836 250 ntBASIC1.36□□□□□ -2.19
HOXC6P09630 MIR7974-201ENST00000615835 79 ntBASIC1.36□□□□□ -2.19
HOXC6P09630 MIR6129-201ENST00000616087 109 ntBASIC1.36□□□□□ -2.19
HOXC6P09630 AC021613.1-201ENST00000623880 111 ntBASIC1.36□□□□□ -2.19
HOXC6P09630 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HOXC6P09630 SNORA25.3-201ENST00000363205 127 ntBASIC1.35□□□□□ -2.19
HOXC6P09630 Y_RNA.298-201ENST00000364960 107 ntBASIC1.35□□□□□ -2.19
HOXC6P09630 RNU6-1067P-201ENST00000384752 107 ntBASIC1.35□□□□□ -2.19
HOXC6P09630 MIR7-2-201ENST00000384970 110 ntBASIC1.35□□□□□ -2.19
HOXC6P09630 AC090844.1-201ENST00000422019 156 ntBASIC1.35□□□□□ -2.19
HOXC6P09630 AL512326.2-201ENST00000426359 151 ntBASIC1.35□□□□□ -2.19
HOXC6P09630 MIR8055-201ENST00000610739 97 ntBASIC1.35□□□□□ -2.19
HOXC6P09630 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
HOXC6P09630 Y_RNA.171-201ENST00000363760 102 ntBASIC1.34□□□□□ -2.19
HOXC6P09630 SNORA70.7-201ENST00000384159 133 ntBASIC1.34□□□□□ -2.19
HOXC6P09630 RNU6-1319P-201ENST00000390855 104 ntBASIC1.34□□□□□ -2.19
HOXC6P09630 RNU6-747P-201ENST00000390928 104 ntBASIC1.34□□□□□ -2.19
HOXC6P09630 RNU6-241P-201ENST00000391148 104 ntBASIC1.34□□□□□ -2.19
HOXC6P09630 RNA5SP144-201ENST00000410846 116 ntBASIC1.34□□□□□ -2.19
HOXC6P09630 RNU6-177P-201ENST00000411257 104 ntBASIC1.34□□□□□ -2.19
HOXC6P09630 POLR2J4-204ENST00000418424 324 ntBASIC1.34□□□□□ -2.19
HOXC6P09630 RPS29P1-201ENST00000465274 159 ntBASIC1.34□□□□□ -2.19
HOXC6P09630 AC079140.2-201ENST00000506193 142 ntBASIC1.34□□□□□ -2.19
HOXC6P09630 RNU7-53P-201ENST00000516705 60 ntBASIC1.34□□□□□ -2.19
HOXC6P09630 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.34□□□□□ -2.19
HOXC6P09630 AL020996.3-201ENST00000606617 222 ntBASIC1.34□□□□□ -2.19
HOXC6P09630 MIR6788-201ENST00000618842 66 ntBASIC1.34□□□□□ -2.19
HOXC6P09630 MIR6717-201ENST00000622747 73 ntBASIC1.34□□□□□ -2.19
HOXC6P09630 MIR4251-201ENST00000635819 61 ntBASIC1.34□□□□□ -2.19
HOXC6P09630 RNU6-1325P-201ENST00000364905 105 ntBASIC1.33□□□□□ -2.2
HOXC6P09630 RNU1-78P-201ENST00000391248 165 ntBASIC1.33□□□□□ -2.2
HOXC6P09630 RNU6-1064P-201ENST00000410626 104 ntBASIC1.33□□□□□ -2.2
HOXC6P09630 Y_RNA.629-201ENST00000411368 105 ntBASIC1.33□□□□□ -2.2
HOXC6P09630 RNU7-73P-201ENST00000458743 63 ntBASIC1.33□□□□□ -2.2
HOXC6P09630 SNORD111.1-201ENST00000516421 86 ntBASIC1.33□□□□□ -2.2
HOXC6P09630 RNU6-1223P-201ENST00000517124 104 ntBASIC1.33□□□□□ -2.2
HOXC6P09630 GHRLOS.1-201ENST00000610995 70 ntBASIC1.33□□□□□ -2.2
HOXC6P09630 AL121890.5-201ENST00000620848 304 ntBASIC1.33□□□□□ -2.2
HOXC6P09630 Y_RNA.273-201ENST00000364703 102 ntBASIC1.32□□□□□ -2.2
HOXC6P09630 Y_RNA.346-201ENST00000365385 112 ntBASIC1.32□□□□□ -2.2
HOXC6P09630 RNU6-476P-201ENST00000384726 107 ntBASIC1.32□□□□□ -2.2
HOXC6P09630 MIR548A3-201ENST00000385297 97 ntBASIC1.32□□□□□ -2.2
HOXC6P09630 RPS29P23-201ENST00000458635 123 ntBASIC1.32□□□□□ -2.2
HOXC6P09630 Y_RNA.649-201ENST00000459077 103 ntBASIC1.32□□□□□ -2.2
HOXC6P09630 snoU13.16-201ENST00000459350 104 ntBASIC1.32□□□□□ -2.2
HOXC6P09630 AC087343.1-201ENST00000477341 475 ntBASIC1.32□□□□□ -2.2
HOXC6P09630 RNA5SP480-201ENST00000516840 109 ntBASIC1.32□□□□□ -2.2
HOXC6P09630 AC004812.1-201ENST00000540773 146 ntBASIC1.32□□□□□ -2.2
HOXC6P09630 MIR3937-201ENST00000580135 106 ntBASIC1.32□□□□□ -2.2
HOXC6P09630 MIR151B-201ENST00000584249 96 ntBASIC1.32□□□□□ -2.2
HOXC6P09630 MIR4295-201ENST00000585286 85 ntBASIC1.32□□□□□ -2.2
HOXC6P09630 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.32□□□□□ -2.2
HOXC6P09630 U6.95-201ENST00000636931 70 ntBASIC1.32□□□□□ -2.2
HOXC6P09630 RNU6-1056P-201ENST00000383996 107 ntBASIC1.31□□□□□ -2.2
HOXC6P09630 RNU6-1144P-201ENST00000384247 104 ntBASIC1.31□□□□□ -2.2
HOXC6P09630 Y_RNA.470-201ENST00000384307 117 ntBASIC1.31□□□□□ -2.2
HOXC6P09630 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.31□□□□□ -2.2
HOXC6P09630 RNA5SP136-201ENST00000410906 107 ntBASIC1.31□□□□□ -2.2
HOXC6P09630 MIR3152-201ENST00000579801 74 ntBASIC1.31□□□□□ -2.2
HOXC6P09630 MIR6515-201ENST00000619843 57 ntBASIC1.31□□□□□ -2.2
HOXC6P09630 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.3□□□□□ -2.2
HOXC6P09630 Y_RNA.35-201ENST00000362601 101 ntBASIC1.3□□□□□ -2.2
HOXC6P09630 SNORA22.1-201ENST00000362701 134 ntBASIC1.3□□□□□ -2.2
HOXC6P09630 RNU6-215P-201ENST00000365169 102 ntBASIC1.3□□□□□ -2.2
HOXC6P09630 MIR548J-201ENST00000408833 112 ntBASIC1.3□□□□□ -2.2
HOXC6P09630 MIR1302-7-201ENST00000408841 72 ntBASIC1.3□□□□□ -2.2
HOXC6P09630 AL022718.1-201ENST00000412004 84 ntBASIC1.3□□□□□ -2.2
HOXC6P09630 AC027119.1-201ENST00000440877 241 ntBASIC1.3□□□□□ -2.2
HOXC6P09630 RNU6-165P-201ENST00000517170 99 ntBASIC1.3□□□□□ -2.2
HOXC6P09630 AL670379.3-201ENST00000605040 251 ntBASIC1.3□□□□□ -2.2
HOXC6P09630 PRELID3BP2-201ENST00000605362 201 ntBASIC1.3□□□□□ -2.2
HOXC6P09630 PVT1_3.1-201ENST00000620853 95 ntBASIC1.3□□□□□ -2.2
HOXC6P09630 SNORD33-201ENST00000362761 85 ntBASIC1.29□□□□□ -2.2
HOXC6P09630 Y_RNA.198-201ENST00000364013 98 ntBASIC1.29□□□□□ -2.2
HOXC6P09630 SNORA1.1-201ENST00000364671 133 ntBASIC1.29□□□□□ -2.2
HOXC6P09630 RNU6-44P-201ENST00000384045 107 ntBASIC1.29□□□□□ -2.2
HOXC6P09630 Y_RNA.531-201ENST00000384589 121 ntBASIC1.29□□□□□ -2.2
HOXC6P09630 Y_RNA.549-201ENST00000384657 102 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 198.4 ms