Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.68□□□□□ -2.3
MT-ND1P03886 AL353765.1-201ENST00000605514 183 ntBASIC0.68□□□□□ -2.3
MT-ND1P03886 AC104465.1-201ENST00000611365 139 ntBASIC0.68□□□□□ -2.3
MT-ND1P03886 MIR30D-201ENST00000362283 70 ntBASIC0.67□□□□□ -2.3
MT-ND1P03886 Y_RNA.251-201ENST00000364551 99 ntBASIC0.67□□□□□ -2.3
MT-ND1P03886 RNU6-1130P-201ENST00000365434 107 ntBASIC0.67□□□□□ -2.3
MT-ND1P03886 RNU6-1165P-201ENST00000410119 107 ntBASIC0.67□□□□□ -2.3
MT-ND1P03886 RNU6-394P-201ENST00000410735 107 ntBASIC0.67□□□□□ -2.3
MT-ND1P03886 AL603825.1-201ENST00000438481 80 ntBASIC0.67□□□□□ -2.3
MT-ND1P03886 RNU7-70P-201ENST00000516941 66 ntBASIC0.67□□□□□ -2.3
MT-ND1P03886 RNU6-794P-201ENST00000517261 64 ntBASIC0.67□□□□□ -2.3
MT-ND1P03886 MIR4771-2-201ENST00000577758 74 ntBASIC0.67□□□□□ -2.3
MT-ND1P03886 MIR3646-201ENST00000578301 84 ntBASIC0.67□□□□□ -2.3
MT-ND1P03886 MIR4771-1-201ENST00000582617 74 ntBASIC0.67□□□□□ -2.3
MT-ND1P03886 DNAJC19P2-201ENST00000593340 302 ntBASIC0.67□□□□□ -2.3
MT-ND1P03886 MIR6767-201ENST00000637302 66 ntBASIC0.67□□□□□ -2.3
MT-ND1P03886 MIR1-1-201ENST00000362147 71 ntBASIC0.66□□□□□ -2.3
MT-ND1P03886 SNORA22.1-201ENST00000362701 134 ntBASIC0.66□□□□□ -2.3
MT-ND1P03886 Y_RNA.150-201ENST00000363562 102 ntBASIC0.66□□□□□ -2.3
MT-ND1P03886 RNU6-1237P-201ENST00000384777 107 ntBASIC0.66□□□□□ -2.3
MT-ND1P03886 SNORD99-201ENST00000408612 74 ntBASIC0.66□□□□□ -2.3
MT-ND1P03886 AC004941.2-201ENST00000427009 228 ntBASIC0.66□□□□□ -2.3
MT-ND1P03886 AC113410.1-201ENST00000505029 247 ntBASIC0.66□□□□□ -2.3
MT-ND1P03886 Y_RNA.757-201ENST00000578934 114 ntBASIC0.66□□□□□ -2.3
MT-ND1P03886 MIR3152-201ENST00000579801 74 ntBASIC0.66□□□□□ -2.3
MT-ND1P03886 AC025627.3-201ENST00000582078 182 ntBASIC0.66□□□□□ -2.3
MT-ND1P03886 FTX_2.1-201ENST00000618816 94 ntBASIC0.66□□□□□ -2.3
MT-ND1P03886 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.65□□□□□ -2.3
MT-ND1P03886 Y_RNA.171-201ENST00000363760 102 ntBASIC0.65□□□□□ -2.31
MT-ND1P03886 Y_RNA.354-201ENST00000365448 111 ntBASIC0.65□□□□□ -2.31
MT-ND1P03886 RNY1P6-201ENST00000384193 109 ntBASIC0.65□□□□□ -2.31
MT-ND1P03886 RNA5SP261-201ENST00000410536 106 ntBASIC0.65□□□□□ -2.31
MT-ND1P03886 AC067940.1-201ENST00000458411 300 ntBASIC0.65□□□□□ -2.31
MT-ND1P03886 Y_RNA.651-201ENST00000459380 103 ntBASIC0.65□□□□□ -2.31
MT-ND1P03886 RNU6-182P-201ENST00000516970 105 ntBASIC0.65□□□□□ -2.31
MT-ND1P03886 MIR4676-201ENST00000583078 72 ntBASIC0.65□□□□□ -2.31
MT-ND1P03886 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.65□□□□□ -2.31
MT-ND1P03886 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.65□□□□□ -2.31
MT-ND1P03886 RMST_2.1-201ENST00000617263 136 ntBASIC0.65□□□□□ -2.31
MT-ND1P03886 RNY1P10-201ENST00000363268 113 ntBASIC0.64□□□□□ -2.31
MT-ND1P03886 RNU6-804P-201ENST00000384286 107 ntBASIC0.64□□□□□ -2.31
MT-ND1P03886 RNU6-886P-201ENST00000384319 105 ntBASIC0.64□□□□□ -2.31
MT-ND1P03886 RNU6-342P-201ENST00000384521 104 ntBASIC0.64□□□□□ -2.31
MT-ND1P03886 SNORD105-201ENST00000386910 85 ntBASIC0.64□□□□□ -2.31
MT-ND1P03886 SNORD37.2-201ENST00000391075 66 ntBASIC0.64□□□□□ -2.31
MT-ND1P03886 RNA5SP144-201ENST00000410846 116 ntBASIC0.64□□□□□ -2.31
MT-ND1P03886 MIR18B-201ENST00000454574 71 ntBASIC0.64□□□□□ -2.31
MT-ND1P03886 RNU7-197P-201ENST00000458836 62 ntBASIC0.64□□□□□ -2.31
MT-ND1P03886 Y_RNA.686-201ENST00000516548 134 ntBASIC0.64□□□□□ -2.31
MT-ND1P03886 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.64□□□□□ -2.31
MT-ND1P03886 MIR3671-201ENST00000580455 88 ntBASIC0.64□□□□□ -2.31
MT-ND1P03886 MIR4804-201ENST00000581683 73 ntBASIC0.64□□□□□ -2.31
MT-ND1P03886 RNU6-309P-201ENST00000364573 106 ntBASIC0.63□□□□□ -2.31
MT-ND1P03886 RNU4-11P-201ENST00000365287 132 ntBASIC0.63□□□□□ -2.31
MT-ND1P03886 SNORA20-201ENST00000384662 132 ntBASIC0.63□□□□□ -2.31
MT-ND1P03886 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.63□□□□□ -2.31
MT-ND1P03886 AC244098.3-201ENST00000424803 96 ntBASIC0.63□□□□□ -2.31
MT-ND1P03886 AC108059.2-201ENST00000434626 151 ntBASIC0.63□□□□□ -2.31
MT-ND1P03886 RNU7-56P-201ENST00000458744 62 ntBASIC0.63□□□□□ -2.31
MT-ND1P03886 RNU7-185P-201ENST00000459215 60 ntBASIC0.63□□□□□ -2.31
MT-ND1P03886 COX6CP6-201ENST00000490840 228 ntBASIC0.63□□□□□ -2.31
MT-ND1P03886 RNU6-977P-201ENST00000516411 103 ntBASIC0.63□□□□□ -2.31
MT-ND1P03886 AC112693.2-201ENST00000556538 232 ntBASIC0.63□□□□□ -2.31
MT-ND1P03886 AL662814.1-201ENST00000617364 121 ntBASIC0.63□□□□□ -2.31
MT-ND1P03886 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.63□□□□□ -2.31
MT-ND1P03886 MIR96-201ENST00000362288 78 ntBASIC0.62□□□□□ -2.31
MT-ND1P03886 RNU6-151P-201ENST00000364158 107 ntBASIC0.62□□□□□ -2.31
MT-ND1P03886 Y_RNA.338-201ENST00000365320 114 ntBASIC0.62□□□□□ -2.31
MT-ND1P03886 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
MT-ND1P03886 Y_RNA.470-201ENST00000384307 117 ntBASIC0.62□□□□□ -2.31
MT-ND1P03886 MIR520F-201ENST00000384824 87 ntBASIC0.62□□□□□ -2.31
MT-ND1P03886 Y_RNA.580-201ENST00000391004 95 ntBASIC0.62□□□□□ -2.31
MT-ND1P03886 AC096949.1-201ENST00000412047 152 ntBASIC0.62□□□□□ -2.31
MT-ND1P03886 AL512326.2-201ENST00000426359 151 ntBASIC0.62□□□□□ -2.31
MT-ND1P03886 RNU6-1053P-201ENST00000515930 101 ntBASIC0.62□□□□□ -2.31
MT-ND1P03886 RNU2-35P-201ENST00000516446 142 ntBASIC0.62□□□□□ -2.31
MT-ND1P03886 RNA5SP102-201ENST00000516865 106 ntBASIC0.62□□□□□ -2.31
MT-ND1P03886 MIR3144-201ENST00000579460 79 ntBASIC0.62□□□□□ -2.31
MT-ND1P03886 AC008608.1-201ENST00000603910 127 ntBASIC0.62□□□□□ -2.31
MT-ND1P03886 AL136317.1-201ENST00000612653 226 ntBASIC0.62□□□□□ -2.31
MT-ND1P03886 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.62□□□□□ -2.31
MT-ND1P03886 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
MT-ND1P03886 Y_RNA.8-201ENST00000362353 102 ntBASIC0.61□□□□□ -2.31
MT-ND1P03886 Y_RNA.398-201ENST00000383952 99 ntBASIC0.61□□□□□ -2.31
MT-ND1P03886 SNORA18-201ENST00000384416 132 ntBASIC0.61□□□□□ -2.31
MT-ND1P03886 MIR520H-201ENST00000385126 88 ntBASIC0.61□□□□□ -2.31
MT-ND1P03886 MIR125B2-201ENST00000385128 89 ntBASIC0.61□□□□□ -2.31
MT-ND1P03886 Y_RNA.584-201ENST00000391090 114 ntBASIC0.61□□□□□ -2.31
MT-ND1P03886 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.61□□□□□ -2.31
MT-ND1P03886 RNU6-240P-201ENST00000516098 97 ntBASIC0.61□□□□□ -2.31
MT-ND1P03886 MTND5P41-201ENST00000517498 206 ntBASIC0.61□□□□□ -2.31
MT-ND1P03886 AC141846.1-201ENST00000568348 142 ntBASIC0.61□□□□□ -2.31
MT-ND1P03886 AC011195.1-201ENST00000578177 177 ntBASIC0.61□□□□□ -2.31
MT-ND1P03886 Y_RNA.778-201ENST00000620203 90 ntBASIC0.61□□□□□ -2.31
MT-ND1P03886 MIR6835-201ENST00000621552 64 ntBASIC0.61□□□□□ -2.31
MT-ND1P03886 MIR337-201ENST00000362281 93 ntBASIC0.6□□□□□ -2.31
MT-ND1P03886 Y_RNA.270-201ENST00000364693 104 ntBASIC0.6□□□□□ -2.31
MT-ND1P03886 RNU6-690P-201ENST00000365242 106 ntBASIC0.6□□□□□ -2.31
MT-ND1P03886 RNU6-449P-201ENST00000383914 107 ntBASIC0.6□□□□□ -2.31
MT-ND1P03886 SNORD116-18-201ENST00000383961 92 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 311.5 ms