Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 MIR494-201ENST00000349529 81 ntBASIC1.79□□□□□ -2.12
COL3A1P02461 RNU6-832P-201ENST00000363319 107 ntBASIC1.79□□□□□ -2.12
COL3A1P02461 RNU6-833P-201ENST00000363486 107 ntBASIC1.79□□□□□ -2.12
COL3A1P02461 SNORA7.1-201ENST00000363750 139 ntBASIC1.79□□□□□ -2.12
COL3A1P02461 Y_RNA.219-201ENST00000364232 113 ntBASIC1.79□□□□□ -2.12
COL3A1P02461 RNU4-67P-201ENST00000364569 141 ntBASIC1.79□□□□□ -2.12
COL3A1P02461 RNU6-42P-201ENST00000384165 107 ntBASIC1.79□□□□□ -2.12
COL3A1P02461 RNU6-950P-201ENST00000384651 107 ntBASIC1.79□□□□□ -2.12
COL3A1P02461 RNU6-1319P-201ENST00000390855 104 ntBASIC1.79□□□□□ -2.12
COL3A1P02461 RNU6-747P-201ENST00000390928 104 ntBASIC1.79□□□□□ -2.12
COL3A1P02461 RNU6-241P-201ENST00000391148 104 ntBASIC1.79□□□□□ -2.12
COL3A1P02461 RNU4-69P-201ENST00000410677 143 ntBASIC1.79□□□□□ -2.12
COL3A1P02461 RNU6-177P-201ENST00000411257 104 ntBASIC1.79□□□□□ -2.12
COL3A1P02461 RNU6-592P-201ENST00000411333 103 ntBASIC1.79□□□□□ -2.12
COL3A1P02461 AL445687.1-201ENST00000439946 251 ntBASIC1.79□□□□□ -2.12
COL3A1P02461 AC069257.2-201ENST00000441819 155 ntBASIC1.79□□□□□ -2.12
COL3A1P02461 RNU6-1116P-201ENST00000517269 99 ntBASIC1.79□□□□□ -2.12
COL3A1P02461 IGLL4P-201ENST00000614590 133 ntBASIC1.79□□□□□ -2.12
COL3A1P02461 AL596028.1-201ENST00000326971 197 ntBASIC1.78□□□□□ -2.12
COL3A1P02461 MIRLET7C-201ENST00000362160 84 ntBASIC1.78□□□□□ -2.12
COL3A1P02461 Y_RNA.360-201ENST00000365512 102 ntBASIC1.78□□□□□ -2.12
COL3A1P02461 Y_RNA.494-201ENST00000384432 111 ntBASIC1.78□□□□□ -2.12
COL3A1P02461 MIR577-201ENST00000385196 96 ntBASIC1.78□□□□□ -2.12
COL3A1P02461 MIR29C-201ENST00000385231 88 ntBASIC1.78□□□□□ -2.12
COL3A1P02461 SNORD78.1-201ENST00000390866 65 ntBASIC1.78□□□□□ -2.12
COL3A1P02461 AL034345.1-201ENST00000407768 123 ntBASIC1.78□□□□□ -2.12
COL3A1P02461 AC096949.1-201ENST00000412047 152 ntBASIC1.78□□□□□ -2.12
COL3A1P02461 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.78□□□□□ -2.12
COL3A1P02461 RNU7-113P-201ENST00000459273 62 ntBASIC1.78□□□□□ -2.12
COL3A1P02461 Y_RNA.773-201ENST00000607168 90 ntBASIC1.78□□□□□ -2.12
COL3A1P02461 MIR203B-201ENST00000636080 86 ntBASIC1.78□□□□□ -2.12
COL3A1P02461 RNU1-58P-201ENST00000362413 163 ntBASIC1.77□□□□□ -2.13
COL3A1P02461 Y_RNA.17-201ENST00000362433 111 ntBASIC1.77□□□□□ -2.13
COL3A1P02461 RNY1P1-201ENST00000364372 112 ntBASIC1.77□□□□□ -2.13
COL3A1P02461 Y_RNA.370-201ENST00000365589 108 ntBASIC1.77□□□□□ -2.13
COL3A1P02461 RNA5SP261-201ENST00000410536 106 ntBASIC1.77□□□□□ -2.13
COL3A1P02461 POLR2J4-204ENST00000418424 324 ntBASIC1.77□□□□□ -2.13
COL3A1P02461 RNU6-1018P-201ENST00000516577 106 ntBASIC1.77□□□□□ -2.13
COL3A1P02461 RNU7-181P-201ENST00000517234 74 ntBASIC1.77□□□□□ -2.13
COL3A1P02461 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
COL3A1P02461 SNORD115-2-201ENST00000362842 82 ntBASIC1.76□□□□□ -2.13
COL3A1P02461 SNORD115-20-201ENST00000365099 82 ntBASIC1.76□□□□□ -2.13
COL3A1P02461 SNORA70.7-201ENST00000384159 133 ntBASIC1.76□□□□□ -2.13
COL3A1P02461 MIR605-201ENST00000385078 83 ntBASIC1.76□□□□□ -2.13
COL3A1P02461 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
COL3A1P02461 SNORA40.6-201ENST00000391153 128 ntBASIC1.76□□□□□ -2.13
COL3A1P02461 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.76□□□□□ -2.13
COL3A1P02461 RNU7-61P-201ENST00000515897 61 ntBASIC1.76□□□□□ -2.13
COL3A1P02461 RNU7-12P-201ENST00000516030 62 ntBASIC1.76□□□□□ -2.13
COL3A1P02461 AC090821.2-201ENST00000523552 176 ntBASIC1.76□□□□□ -2.13
COL3A1P02461 AC069114.2-201ENST00000604699 304 ntBASIC1.76□□□□□ -2.13
COL3A1P02461 MIR1255B1-201ENST00000636325 63 ntBASIC1.76□□□□□ -2.13
COL3A1P02461 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
COL3A1P02461 RNU6-170P-201ENST00000362832 104 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 SNORD115-3-201ENST00000363100 82 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 SNORD45B-201ENST00000364617 72 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 Y_RNA.290-201ENST00000364879 114 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 SNORD77B-201ENST00000391112 67 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 RNU6-644P-201ENST00000391155 98 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 AL451046.2-201ENST00000403074 277 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 AC004941.2-201ENST00000427009 228 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 RNU6-958P-201ENST00000516995 106 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 AC095038.3-201ENST00000634439 195 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.75□□□□□ -2.13
COL3A1P02461 SNORA6-201ENST00000384033 151 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 RNU6-1067P-201ENST00000384752 107 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 MIR136-201ENST00000385207 82 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 U8.16-201ENST00000391279 133 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.75□□□□□ -2.13
COL3A1P02461 MRPL35P3-201ENST00000421557 364 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.75□□□□□ -2.13
COL3A1P02461 RNU7-67P-201ENST00000459003 62 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 SNORA31.4-201ENST00000516049 129 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 RNA5SP220-201ENST00000516298 104 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 RNU6-795P-201ENST00000516323 103 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 SNORA31.10-201ENST00000516482 106 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 RNA5SP168-201ENST00000516642 112 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 RNA5SP33-201ENST00000516687 98 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 RNU1-92P-201ENST00000517017 135 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 AL513534.2-201ENST00000603836 250 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 AC096720.1-201ENST00000604441 183 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 U7.3-201ENST00000616123 62 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 AC012531.4-201ENST00000616509 177 ntBASIC1.75□□□□□ -2.13
COL3A1P02461 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL3A1P02461 AP000648.3-201ENST00000623539 4507 ntBASIC1.74□□□□□ -2.13
COL3A1P02461 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL3A1P02461 MIR627-201ENST00000384979 97 ntBASIC1.74□□□□□ -2.13
COL3A1P02461 SNORA7.5-201ENST00000410672 110 ntBASIC1.74□□□□□ -2.13
COL3A1P02461 RNA5SP57-201ENST00000459463 123 ntBASIC1.74□□□□□ -2.13
COL3A1P02461 RNU7-53P-201ENST00000516705 60 ntBASIC1.74□□□□□ -2.13
COL3A1P02461 AC022254.1-201ENST00000567857 235 ntBASIC1.74□□□□□ -2.13
COL3A1P02461 MIR3126-201ENST00000577443 74 ntBASIC1.74□□□□□ -2.13
COL3A1P02461 MIR5094-201ENST00000578766 85 ntBASIC1.74□□□□□ -2.13
COL3A1P02461 AL157834.3-201ENST00000615543 103 ntBASIC1.74□□□□□ -2.13
COL3A1P02461 Y_RNA.171-201ENST00000363760 102 ntBASIC1.73□□□□□ -2.13
COL3A1P02461 SNORD116-22-201ENST00000384430 92 ntBASIC1.73□□□□□ -2.13
COL3A1P02461 Y_RNA.593-201ENST00000410292 98 ntBASIC1.73□□□□□ -2.13
COL3A1P02461 AL353770.2-201ENST00000620024 78 ntBASIC1.73□□□□□ -2.13
COL3A1P02461 AC022513.1-201ENST00000624512 117 ntBASIC1.73□□□□□ -2.13
COL3A1P02461 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms