Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 MIR1273G-201ENST00000577677 100 ntBASIC-0.04□□□□□ -2.42
CPSF4O95639 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.04□□□□□ -2.42
CPSF4O95639 AL160413.1-201ENST00000622780 310 ntBASIC-0.04□□□□□ -2.42
CPSF4O95639 MIR6841-201ENST00000637129 72 ntBASIC-0.04□□□□□ -2.42
CPSF4O95639 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
CPSF4O95639 SNORA22.1-201ENST00000362701 134 ntBASIC-0.05□□□□□ -2.42
CPSF4O95639 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.05□□□□□ -2.42
CPSF4O95639 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.05□□□□□ -2.42
CPSF4O95639 RNU6-949P-201ENST00000384040 107 ntBASIC-0.05□□□□□ -2.42
CPSF4O95639 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.05□□□□□ -2.42
CPSF4O95639 SNORA20-201ENST00000384662 132 ntBASIC-0.05□□□□□ -2.42
CPSF4O95639 RNU6-535P-201ENST00000384722 107 ntBASIC-0.05□□□□□ -2.42
CPSF4O95639 SNORA25.16-201ENST00000516741 121 ntBASIC-0.05□□□□□ -2.42
CPSF4O95639 RNU6-135P-201ENST00000516769 101 ntBASIC-0.05□□□□□ -2.42
CPSF4O95639 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.05□□□□□ -2.42
CPSF4O95639 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.05□□□□□ -2.42
CPSF4O95639 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.05□□□□□ -2.42
CPSF4O95639 MIR8087-201ENST00000612745 78 ntBASIC-0.05□□□□□ -2.42
CPSF4O95639 AC021613.1-201ENST00000623880 111 ntBASIC-0.05□□□□□ -2.42
CPSF4O95639 AC091304.10-201ENST00000641554 121 ntBASIC-0.05□□□□□ -2.42
CPSF4O95639 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.06□□□□□ -2.42
CPSF4O95639 SNORD114-5-201ENST00000362928 70 ntBASIC-0.06□□□□□ -2.42
CPSF4O95639 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.06□□□□□ -2.42
CPSF4O95639 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.06□□□□□ -2.42
CPSF4O95639 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.06□□□□□ -2.42
CPSF4O95639 SNORA18-201ENST00000384416 132 ntBASIC-0.06□□□□□ -2.42
CPSF4O95639 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
CPSF4O95639 RNU6-127P-201ENST00000390897 107 ntBASIC-0.06□□□□□ -2.42
CPSF4O95639 AC113618.1-201ENST00000416747 285 ntBASIC-0.06□□□□□ -2.42
CPSF4O95639 SNORD2.1-201ENST00000458762 69 ntBASIC-0.06□□□□□ -2.42
CPSF4O95639 RNU7-129P-201ENST00000516128 62 ntBASIC-0.06□□□□□ -2.42
CPSF4O95639 RNU6-570P-201ENST00000517051 105 ntBASIC-0.06□□□□□ -2.42
CPSF4O95639 MIR4680-201ENST00000580906 66 ntBASIC-0.06□□□□□ -2.42
CPSF4O95639 MIR4639-201ENST00000584938 69 ntBASIC-0.06□□□□□ -2.42
CPSF4O95639 AC244669.1-204ENST00000621564 178 ntBASIC-0.06□□□□□ -2.42
CPSF4O95639 AC134503.1-201ENST00000633048 54 ntBASIC-0.06□□□□□ -2.42
CPSF4O95639 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.07□□□□□ -2.42
CPSF4O95639 RNY1P13-201ENST00000365030 105 ntBASIC-0.07□□□□□ -2.42
CPSF4O95639 RNU6-716P-201ENST00000365621 103 ntBASIC-0.07□□□□□ -2.42
CPSF4O95639 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.07□□□□□ -2.42
CPSF4O95639 MIR760-201ENST00000390220 80 ntBASIC-0.07□□□□□ -2.42
CPSF4O95639 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
CPSF4O95639 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.07□□□□□ -2.42
CPSF4O95639 MIR4290-201ENST00000583807 95 ntBASIC-0.07□□□□□ -2.42
CPSF4O95639 AL365205.2-201ENST00000594586 68 ntBASIC-0.07□□□□□ -2.42
CPSF4O95639 AL442067.1-201ENST00000613261 223 ntBASIC-0.07□□□□□ -2.42
CPSF4O95639 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.07□□□□□ -2.42
CPSF4O95639 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.08□□□□□ -2.42
CPSF4O95639 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.08□□□□□ -2.42
CPSF4O95639 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.08□□□□□ -2.42
CPSF4O95639 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.08□□□□□ -2.42
CPSF4O95639 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.08□□□□□ -2.42
CPSF4O95639 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.08□□□□□ -2.42
CPSF4O95639 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.08□□□□□ -2.42
CPSF4O95639 MIR643-201ENST00000385267 97 ntBASIC-0.08□□□□□ -2.42
CPSF4O95639 RNU6-381P-201ENST00000391259 108 ntBASIC-0.08□□□□□ -2.42
CPSF4O95639 MIR548P-201ENST00000408336 84 ntBASIC-0.08□□□□□ -2.42
CPSF4O95639 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.08□□□□□ -2.42
CPSF4O95639 RNU6-848P-201ENST00000515948 107 ntBASIC-0.08□□□□□ -2.42
CPSF4O95639 RNU6-617P-201ENST00000516147 107 ntBASIC-0.08□□□□□ -2.42
CPSF4O95639 RNU6-473P-201ENST00000516164 107 ntBASIC-0.08□□□□□ -2.42
CPSF4O95639 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.08□□□□□ -2.42
CPSF4O95639 RNU7-70P-201ENST00000516941 66 ntBASIC-0.08□□□□□ -2.42
CPSF4O95639 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.08□□□□□ -2.42
CPSF4O95639 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.08□□□□□ -2.42
CPSF4O95639 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.08□□□□□ -2.42
CPSF4O95639 MIR4752-201ENST00000579672 72 ntBASIC-0.08□□□□□ -2.42
CPSF4O95639 MIR4305-201ENST00000583252 102 ntBASIC-0.08□□□□□ -2.42
CPSF4O95639 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.08□□□□□ -2.42
CPSF4O95639 AL365265.1-201ENST00000621045 234 ntBASIC-0.08□□□□□ -2.42
CPSF4O95639 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.08□□□□□ -2.42
CPSF4O95639 RNA5SP245-201ENST00000364239 121 ntBASIC-0.09□□□□□ -2.42
CPSF4O95639 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.09□□□□□ -2.42
CPSF4O95639 RNU4-16P-201ENST00000364737 141 ntBASIC-0.09□□□□□ -2.42
CPSF4O95639 RNU6-728P-201ENST00000365375 104 ntBASIC-0.09□□□□□ -2.42
CPSF4O95639 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.09□□□□□ -2.42
CPSF4O95639 MIR489-201ENST00000384923 84 ntBASIC-0.09□□□□□ -2.42
CPSF4O95639 MIR610-201ENST00000385139 96 ntBASIC-0.09□□□□□ -2.42
CPSF4O95639 SNORA79-201ENST00000408376 140 ntBASIC-0.09□□□□□ -2.42
CPSF4O95639 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.09□□□□□ -2.42
CPSF4O95639 MTATP6P23-201ENST00000440153 476 ntBASIC-0.09□□□□□ -2.42
CPSF4O95639 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.09□□□□□ -2.42
CPSF4O95639 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.09□□□□□ -2.42
CPSF4O95639 AC141557.1-201ENST00000540982 400 ntBASIC-0.09□□□□□ -2.42
CPSF4O95639 AL442663.2-201ENST00000554385 511 ntBASIC-0.09□□□□□ -2.42
CPSF4O95639 MTND5P32-201ENST00000560711 1802 ntBASIC-0.1□□□□□ -2.43
CPSF4O95639 RNA5SP325-201ENST00000363756 130 ntBASIC-0.1□□□□□ -2.43
CPSF4O95639 RNA5SP128-201ENST00000365305 116 ntBASIC-0.1□□□□□ -2.43
CPSF4O95639 MIR145-201ENST00000384967 88 ntBASIC-0.1□□□□□ -2.43
CPSF4O95639 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.1□□□□□ -2.43
CPSF4O95639 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.1□□□□□ -2.43
CPSF4O95639 RNA5SP127-201ENST00000411051 133 ntBASIC-0.1□□□□□ -2.43
CPSF4O95639 AL358176.2-201ENST00000425769 204 ntBASIC-0.1□□□□□ -2.43
CPSF4O95639 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.1□□□□□ -2.43
CPSF4O95639 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.1□□□□□ -2.43
CPSF4O95639 MIR5190-201ENST00000581537 80 ntBASIC-0.1□□□□□ -2.43
CPSF4O95639 MIR3171-201ENST00000584270 74 ntBASIC-0.1□□□□□ -2.43
CPSF4O95639 U2.14-201ENST00000615943 113 ntBASIC-0.1□□□□□ -2.43
CPSF4O95639 MIR499B-201ENST00000636498 73 ntBASIC-0.1□□□□□ -2.43
CPSF4O95639 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms