Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 MIR613-201ENST00000385248 95 ntBASIC0.34□□□□□ -2.36
CTDNEP1O95476 RNU6-1319P-201ENST00000390855 104 ntBASIC0.34□□□□□ -2.36
CTDNEP1O95476 RNU6-747P-201ENST00000390928 104 ntBASIC0.34□□□□□ -2.36
CTDNEP1O95476 RNU6-241P-201ENST00000391148 104 ntBASIC0.34□□□□□ -2.36
CTDNEP1O95476 MIR548H3-201ENST00000408771 118 ntBASIC0.34□□□□□ -2.36
CTDNEP1O95476 AC096949.1-201ENST00000412047 152 ntBASIC0.34□□□□□ -2.36
CTDNEP1O95476 RNU7-156P-201ENST00000517214 74 ntBASIC0.34□□□□□ -2.36
CTDNEP1O95476 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.34□□□□□ -2.36
CTDNEP1O95476 MIR378D2-201ENST00000580636 98 ntBASIC0.34□□□□□ -2.36
CTDNEP1O95476 AC090897.1-201ENST00000580909 226 ntBASIC0.34□□□□□ -2.36
CTDNEP1O95476 MIR3128-201ENST00000581957 66 ntBASIC0.34□□□□□ -2.36
CTDNEP1O95476 SNORD114-23-201ENST00000363536 72 ntBASIC0.33□□□□□ -2.36
CTDNEP1O95476 Y_RNA.430-201ENST00000384081 110 ntBASIC0.33□□□□□ -2.36
CTDNEP1O95476 MT-TF-201ENST00000387314 71 ntBASIC0.33□□□□□ -2.36
CTDNEP1O95476 SNORA79-201ENST00000408376 140 ntBASIC0.33□□□□□ -2.36
CTDNEP1O95476 MIR1257-201ENST00000408490 117 ntBASIC0.33□□□□□ -2.36
CTDNEP1O95476 SNORD100-201ENST00000408573 76 ntBASIC0.33□□□□□ -2.36
CTDNEP1O95476 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.33□□□□□ -2.36
CTDNEP1O95476 AC002350.1-201ENST00000490759 375 ntBASIC0.33□□□□□ -2.36
CTDNEP1O95476 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.33□□□□□ -2.36
CTDNEP1O95476 SNORA68.3-201ENST00000515906 83 ntBASIC0.33□□□□□ -2.36
CTDNEP1O95476 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
CTDNEP1O95476 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.33□□□□□ -2.36
CTDNEP1O95476 MRPS18CP4-201ENST00000535821 231 ntBASIC0.33□□□□□ -2.36
CTDNEP1O95476 AL162730.1-201ENST00000605734 292 ntBASIC0.33□□□□□ -2.36
CTDNEP1O95476 MIR8066-201ENST00000617280 78 ntBASIC0.33□□□□□ -2.36
CTDNEP1O95476 AL662814.1-201ENST00000617364 121 ntBASIC0.33□□□□□ -2.36
CTDNEP1O95476 Y_RNA.60-201ENST00000362831 98 ntBASIC0.32□□□□□ -2.36
CTDNEP1O95476 Y_RNA.350-201ENST00000365409 98 ntBASIC0.32□□□□□ -2.36
CTDNEP1O95476 Y_RNA.393-201ENST00000383936 102 ntBASIC0.32□□□□□ -2.36
CTDNEP1O95476 Y_RNA.571-201ENST00000384753 98 ntBASIC0.32□□□□□ -2.36
CTDNEP1O95476 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.32□□□□□ -2.36
CTDNEP1O95476 Y_RNA.617-201ENST00000410920 90 ntBASIC0.32□□□□□ -2.36
CTDNEP1O95476 RNU7-80P-201ENST00000459562 61 ntBASIC0.32□□□□□ -2.36
CTDNEP1O95476 RN7SKP12-201ENST00000516275 143 ntBASIC0.32□□□□□ -2.36
CTDNEP1O95476 SNORD116-25-201ENST00000516517 92 ntBASIC0.32□□□□□ -2.36
CTDNEP1O95476 RNU6-1149P-201ENST00000516810 97 ntBASIC0.32□□□□□ -2.36
CTDNEP1O95476 RNU6-1258P-201ENST00000516911 111 ntBASIC0.32□□□□□ -2.36
CTDNEP1O95476 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.32□□□□□ -2.36
CTDNEP1O95476 RN7SL793P-201ENST00000583259 296 ntBASIC0.32□□□□□ -2.36
CTDNEP1O95476 AC021613.1-201ENST00000623880 111 ntBASIC0.32□□□□□ -2.36
CTDNEP1O95476 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
CTDNEP1O95476 MTND5P32-201ENST00000560711 1802 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 AL589743.1-201ENST00000551932 2712 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 Y_RNA.162-201ENST00000363683 102 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 Y_RNA.182-201ENST00000363880 111 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 VTRNA1-3-201ENST00000365645 89 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 Y_RNA.412-201ENST00000384001 104 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 RNU6-643P-201ENST00000384018 107 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 RNU6-574P-201ENST00000384265 107 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 RNU6-364P-201ENST00000384387 107 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 RNY1P4-201ENST00000384595 115 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 MIR624-201ENST00000385217 97 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 U8.15-201ENST00000390947 134 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 RNU6-447P-201ENST00000410293 104 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 RNU6-1118P-201ENST00000410382 104 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 RNU6-1076P-201ENST00000410397 104 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 RNU6-355P-201ENST00000410427 104 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 RNU6-791P-201ENST00000410467 104 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 RNU6-705P-201ENST00000410601 104 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 RNU6-1100P-201ENST00000410691 104 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 RNU6-860P-201ENST00000410860 104 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 RNU6-1217P-201ENST00000411276 104 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 RNU6-785P-201ENST00000411324 104 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 AL118496.2-201ENST00000448300 230 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 Y_RNA.797-201ENST00000515977 94 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 RNU6-111P-201ENST00000517179 105 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 MIR4503-201ENST00000582187 83 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 AC062037.2-201ENST00000610137 73 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 U6.90-201ENST00000614007 104 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 U6.70-201ENST00000620287 104 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 U6.106-201ENST00000636360 105 ntBASIC0.31□□□□□ -2.36
CTDNEP1O95476 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
CTDNEP1O95476 Y_RNA.42-201ENST00000362660 108 ntBASIC0.3□□□□□ -2.36
CTDNEP1O95476 Y_RNA.121-201ENST00000363309 113 ntBASIC0.3□□□□□ -2.36
CTDNEP1O95476 RNA5SP517-201ENST00000364724 117 ntBASIC0.3□□□□□ -2.36
CTDNEP1O95476 RNU4-16P-201ENST00000364737 141 ntBASIC0.3□□□□□ -2.36
CTDNEP1O95476 Y_RNA.556-201ENST00000384677 113 ntBASIC0.3□□□□□ -2.36
CTDNEP1O95476 RNU6-918P-201ENST00000391219 106 ntBASIC0.3□□□□□ -2.36
CTDNEP1O95476 Y_RNA.588-201ENST00000391254 102 ntBASIC0.3□□□□□ -2.36
CTDNEP1O95476 RNA5SP127-201ENST00000411051 133 ntBASIC0.3□□□□□ -2.36
CTDNEP1O95476 RNU6-1045P-201ENST00000516321 107 ntBASIC0.3□□□□□ -2.36
CTDNEP1O95476 AC141846.1-201ENST00000568348 142 ntBASIC0.3□□□□□ -2.36
CTDNEP1O95476 AC099654.10-201ENST00000640395 161 ntBASIC0.3□□□□□ -2.36
CTDNEP1O95476 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
CTDNEP1O95476 SNORA22.1-201ENST00000362701 134 ntBASIC0.29□□□□□ -2.36
CTDNEP1O95476 RNU6-275P-201ENST00000364910 107 ntBASIC0.29□□□□□ -2.36
CTDNEP1O95476 RNU6-47P-201ENST00000383866 107 ntBASIC0.29□□□□□ -2.36
CTDNEP1O95476 Y_RNA.447-201ENST00000384184 113 ntBASIC0.29□□□□□ -2.36
CTDNEP1O95476 Y_RNA.454-201ENST00000384224 113 ntBASIC0.29□□□□□ -2.36
CTDNEP1O95476 RNU6-679P-201ENST00000391003 106 ntBASIC0.29□□□□□ -2.36
CTDNEP1O95476 RNA5SP94-201ENST00000516917 108 ntBASIC0.29□□□□□ -2.36
CTDNEP1O95476 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.29□□□□□ -2.36
CTDNEP1O95476 MIRLET7D-201ENST00000362263 87 ntBASIC0.28□□□□□ -2.36
CTDNEP1O95476 Y_RNA.171-201ENST00000363760 102 ntBASIC0.28□□□□□ -2.36
CTDNEP1O95476 Y_RNA.193-201ENST00000363979 102 ntBASIC0.28□□□□□ -2.36
CTDNEP1O95476 Y_RNA.307-201ENST00000365022 117 ntBASIC0.28□□□□□ -2.36
CTDNEP1O95476 RNU4-70P-201ENST00000384579 139 ntBASIC0.28□□□□□ -2.36
CTDNEP1O95476 SNORD93-201ENST00000408813 74 ntBASIC0.28□□□□□ -2.36
CTDNEP1O95476 RNA5SP261-201ENST00000410536 106 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms