Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 MIR4771-1-201ENST00000582617 74 ntBASIC0.82□□□□□ -2.28
GPC4O75487 AC020891.4-201ENST00000605745 93 ntBASIC0.82□□□□□ -2.28
GPC4O75487 AC004792.1-201ENST00000614523 137 ntBASIC0.82□□□□□ -2.28
GPC4O75487 Y_RNA.29-201ENST00000362570 113 ntBASIC0.81□□□□□ -2.28
GPC4O75487 Y_RNA.116-201ENST00000363292 103 ntBASIC0.81□□□□□ -2.28
GPC4O75487 Y_RNA.393-201ENST00000383936 102 ntBASIC0.81□□□□□ -2.28
GPC4O75487 RNU6-1319P-201ENST00000390855 104 ntBASIC0.81□□□□□ -2.28
GPC4O75487 RNU6-747P-201ENST00000390928 104 ntBASIC0.81□□□□□ -2.28
GPC4O75487 RNU6-241P-201ENST00000391148 104 ntBASIC0.81□□□□□ -2.28
GPC4O75487 RNU6-177P-201ENST00000411257 104 ntBASIC0.81□□□□□ -2.28
GPC4O75487 Y_RNA.662-201ENST00000516028 97 ntBASIC0.81□□□□□ -2.28
GPC4O75487 AC025627.3-201ENST00000582078 182 ntBASIC0.81□□□□□ -2.28
GPC4O75487 AC072026.1-201ENST00000605023 201 ntBASIC0.81□□□□□ -2.28
GPC4O75487 MIR6844-201ENST00000637122 62 ntBASIC0.81□□□□□ -2.28
GPC4O75487 Y_RNA.52-201ENST00000362760 96 ntBASIC0.8□□□□□ -2.28
GPC4O75487 Y_RNA.454-201ENST00000384224 113 ntBASIC0.8□□□□□ -2.28
GPC4O75487 SNORD105-201ENST00000386910 85 ntBASIC0.8□□□□□ -2.28
GPC4O75487 RNU6-312P-201ENST00000364629 107 ntBASIC0.79□□□□□ -2.28
GPC4O75487 Y_RNA.337-201ENST00000365312 102 ntBASIC0.79□□□□□ -2.28
GPC4O75487 MIR563-201ENST00000385080 79 ntBASIC0.79□□□□□ -2.28
GPC4O75487 MIR518E-201ENST00000385252 88 ntBASIC0.79□□□□□ -2.28
GPC4O75487 RNU6-1165P-201ENST00000410119 107 ntBASIC0.79□□□□□ -2.28
GPC4O75487 RPS29P1-201ENST00000465274 159 ntBASIC0.79□□□□□ -2.28
GPC4O75487 AL136317.1-201ENST00000612653 226 ntBASIC0.79□□□□□ -2.28
GPC4O75487 RMST_2.1-201ENST00000617263 136 ntBASIC0.79□□□□□ -2.28
GPC4O75487 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.79□□□□□ -2.28
GPC4O75487 RNU6-1130P-201ENST00000365434 107 ntBASIC0.78□□□□□ -2.28
GPC4O75487 RNU2-64P-201ENST00000411315 191 ntBASIC0.78□□□□□ -2.28
GPC4O75487 MIR4676-201ENST00000583078 72 ntBASIC0.78□□□□□ -2.28
GPC4O75487 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.78□□□□□ -2.28
GPC4O75487 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
GPC4O75487 MIR30D-201ENST00000362283 70 ntBASIC0.77□□□□□ -2.29
GPC4O75487 Y_RNA.430-201ENST00000384081 110 ntBASIC0.77□□□□□ -2.29
GPC4O75487 RNU6-804P-201ENST00000384286 107 ntBASIC0.77□□□□□ -2.29
GPC4O75487 SNORA20-201ENST00000384662 132 ntBASIC0.77□□□□□ -2.29
GPC4O75487 MIR520F-201ENST00000384824 87 ntBASIC0.77□□□□□ -2.29
GPC4O75487 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.77□□□□□ -2.29
GPC4O75487 AC244098.3-201ENST00000424803 96 ntBASIC0.77□□□□□ -2.29
GPC4O75487 RNU7-120P-201ENST00000459334 63 ntBASIC0.77□□□□□ -2.29
GPC4O75487 RNU6-977P-201ENST00000516411 103 ntBASIC0.77□□□□□ -2.29
GPC4O75487 MIR4804-201ENST00000581683 73 ntBASIC0.77□□□□□ -2.29
GPC4O75487 MIR6788-201ENST00000618842 66 ntBASIC0.77□□□□□ -2.29
GPC4O75487 AC021613.1-201ENST00000623880 111 ntBASIC0.77□□□□□ -2.29
GPC4O75487 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.76□□□□□ -2.29
GPC4O75487 RNU6-151P-201ENST00000364158 107 ntBASIC0.76□□□□□ -2.29
GPC4O75487 RNU4-84P-201ENST00000364200 139 ntBASIC0.76□□□□□ -2.29
GPC4O75487 RNU4-11P-201ENST00000365287 132 ntBASIC0.76□□□□□ -2.29
GPC4O75487 SNORD116-18-201ENST00000383961 92 ntBASIC0.76□□□□□ -2.29
GPC4O75487 RNU6-239P-201ENST00000390990 99 ntBASIC0.76□□□□□ -2.29
GPC4O75487 RNA5SP261-201ENST00000410536 106 ntBASIC0.76□□□□□ -2.29
GPC4O75487 MIR18B-201ENST00000454574 71 ntBASIC0.76□□□□□ -2.29
GPC4O75487 AC011195.1-201ENST00000578177 177 ntBASIC0.76□□□□□ -2.29
GPC4O75487 SNORA4-201ENST00000584302 138 ntBASIC0.76□□□□□ -2.29
GPC4O75487 MIR4653-201ENST00000585107 83 ntBASIC0.76□□□□□ -2.29
GPC4O75487 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.76□□□□□ -2.29
GPC4O75487 MIR6841-201ENST00000637129 72 ntBASIC0.76□□□□□ -2.29
GPC4O75487 Y_RNA.171-201ENST00000363760 102 ntBASIC0.75□□□□□ -2.29
GPC4O75487 Y_RNA.240-201ENST00000364469 95 ntBASIC0.75□□□□□ -2.29
GPC4O75487 Y_RNA.272-201ENST00000364696 102 ntBASIC0.75□□□□□ -2.29
GPC4O75487 Y_RNA.354-201ENST00000365448 111 ntBASIC0.75□□□□□ -2.29
GPC4O75487 Y_RNA.497-201ENST00000384447 98 ntBASIC0.75□□□□□ -2.29
GPC4O75487 MIR520H-201ENST00000385126 88 ntBASIC0.75□□□□□ -2.29
GPC4O75487 RNU1-119P-201ENST00000391122 165 ntBASIC0.75□□□□□ -2.29
GPC4O75487 AC004941.2-201ENST00000427009 228 ntBASIC0.75□□□□□ -2.29
GPC4O75487 RNU7-56P-201ENST00000458744 62 ntBASIC0.75□□□□□ -2.29
GPC4O75487 RNA5SP272-201ENST00000516095 111 ntBASIC0.75□□□□□ -2.29
GPC4O75487 RNA5SP220-201ENST00000516298 104 ntBASIC0.75□□□□□ -2.29
GPC4O75487 Y_RNA.686-201ENST00000516548 134 ntBASIC0.75□□□□□ -2.29
GPC4O75487 MIR3152-201ENST00000579801 74 ntBASIC0.75□□□□□ -2.29
GPC4O75487 AL078603.1-201ENST00000603824 313 ntBASIC0.75□□□□□ -2.29
GPC4O75487 AL589743.1-201ENST00000551932 2712 ntBASIC0.74□□□□□ -2.29
GPC4O75487 SNORA22.1-201ENST00000362701 134 ntBASIC0.74□□□□□ -2.29
GPC4O75487 Y_RNA.270-201ENST00000364693 104 ntBASIC0.74□□□□□ -2.29
GPC4O75487 RNU6-690P-201ENST00000365242 106 ntBASIC0.74□□□□□ -2.29
GPC4O75487 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
GPC4O75487 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
GPC4O75487 RNU6-342P-201ENST00000384521 104 ntBASIC0.74□□□□□ -2.29
GPC4O75487 SNORA75.5-201ENST00000391291 81 ntBASIC0.74□□□□□ -2.29
GPC4O75487 MIR548J-201ENST00000408833 112 ntBASIC0.74□□□□□ -2.29
GPC4O75487 RNA5SP237-201ENST00000410414 113 ntBASIC0.74□□□□□ -2.29
GPC4O75487 RNU6-1135P-201ENST00000411083 103 ntBASIC0.74□□□□□ -2.29
GPC4O75487 AL606490.4-201ENST00000423117 127 ntBASIC0.74□□□□□ -2.29
GPC4O75487 RPL39P25-201ENST00000449384 154 ntBASIC0.74□□□□□ -2.29
GPC4O75487 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.74□□□□□ -2.29
GPC4O75487 RNU7-185P-201ENST00000459215 60 ntBASIC0.74□□□□□ -2.29
GPC4O75487 RNU6-240P-201ENST00000516098 97 ntBASIC0.74□□□□□ -2.29
GPC4O75487 RNA5SP236-201ENST00000516169 116 ntBASIC0.74□□□□□ -2.29
GPC4O75487 RNU6-1258P-201ENST00000516911 111 ntBASIC0.74□□□□□ -2.29
GPC4O75487 MIR151B-201ENST00000584249 96 ntBASIC0.74□□□□□ -2.29
GPC4O75487 HSBP1P2-201ENST00000299671 229 ntBASIC0.73□□□□□ -2.29
GPC4O75487 Y_RNA.785-201ENST00000384290 109 ntBASIC0.73□□□□□ -2.29
GPC4O75487 RNU6-460P-201ENST00000391158 108 ntBASIC0.73□□□□□ -2.29
GPC4O75487 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
GPC4O75487 SNORA25.12-201ENST00000516202 82 ntBASIC0.73□□□□□ -2.29
GPC4O75487 RNU7-121P-201ENST00000516604 62 ntBASIC0.73□□□□□ -2.29
GPC4O75487 RNU6-182P-201ENST00000516970 105 ntBASIC0.73□□□□□ -2.29
GPC4O75487 CYP3A137P-201ENST00000562436 69 ntBASIC0.73□□□□□ -2.29
GPC4O75487 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.73□□□□□ -2.29
GPC4O75487 DNAJC19P2-201ENST00000593340 302 ntBASIC0.73□□□□□ -2.29
GPC4O75487 RNU6-349P-201ENST00000362402 107 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms