Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 RNU6-32P-201ENST00000383948 107 ntBASIC1.99□□□□□ -2.09
VAMP4O75379 RNU6-13P-201ENST00000384248 107 ntBASIC1.99□□□□□ -2.09
VAMP4O75379 Y_RNA.470-201ENST00000384307 117 ntBASIC1.99□□□□□ -2.09
VAMP4O75379 RNU6-12P-201ENST00000384604 107 ntBASIC1.99□□□□□ -2.09
VAMP4O75379 RNU6-41P-201ENST00000384741 107 ntBASIC1.99□□□□□ -2.09
VAMP4O75379 RNU7-41P-201ENST00000515917 61 ntBASIC1.99□□□□□ -2.09
VAMP4O75379 GHRLOS.1-201ENST00000610995 70 ntBASIC1.99□□□□□ -2.09
VAMP4O75379 RNU6-766P-201ENST00000362478 107 ntBASIC1.98□□□□□ -2.09
VAMP4O75379 RNU6-60P-201ENST00000364792 103 ntBASIC1.98□□□□□ -2.09
VAMP4O75379 Y_RNA.328-201ENST00000365208 113 ntBASIC1.98□□□□□ -2.09
VAMP4O75379 RNU6-1113P-201ENST00000384348 107 ntBASIC1.98□□□□□ -2.09
VAMP4O75379 SNORA67.5-201ENST00000391036 107 ntBASIC1.98□□□□□ -2.09
VAMP4O75379 MIR934-201ENST00000401241 83 ntBASIC1.98□□□□□ -2.09
VAMP4O75379 HMGN1P33-201ENST00000432945 451 ntBASIC1.98□□□□□ -2.09
VAMP4O75379 MIR548AO-201ENST00000579992 96 ntBASIC1.98□□□□□ -2.09
VAMP4O75379 MIR450A1-201ENST00000362262 91 ntBASIC1.97□□□□□ -2.09
VAMP4O75379 Y_RNA.78-201ENST00000362970 110 ntBASIC1.97□□□□□ -2.09
VAMP4O75379 RNA5SP48-201ENST00000363969 126 ntBASIC1.97□□□□□ -2.09
VAMP4O75379 RNU6-602P-201ENST00000411155 105 ntBASIC1.97□□□□□ -2.09
VAMP4O75379 RNU6-168P-201ENST00000516189 101 ntBASIC1.97□□□□□ -2.09
VAMP4O75379 MIR4285-201ENST00000581001 85 ntBASIC1.97□□□□□ -2.09
VAMP4O75379 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.97□□□□□ -2.09
VAMP4O75379 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.97□□□□□ -2.09
VAMP4O75379 MIR8065-201ENST00000620577 100 ntBASIC1.97□□□□□ -2.09
VAMP4O75379 AP000648.3-201ENST00000623539 4507 ntBASIC1.96□□□□□ -2.1
VAMP4O75379 MIR302D-201ENST00000362275 68 ntBASIC1.96□□□□□ -2.1
VAMP4O75379 RNU6-363P-201ENST00000362895 105 ntBASIC1.96□□□□□ -2.1
VAMP4O75379 RNU1-42P-201ENST00000364033 160 ntBASIC1.96□□□□□ -2.1
VAMP4O75379 RNA5SP363-201ENST00000365072 115 ntBASIC1.96□□□□□ -2.1
VAMP4O75379 RNU6-756P-201ENST00000383997 107 ntBASIC1.96□□□□□ -2.1
VAMP4O75379 Y_RNA.495-201ENST00000384435 112 ntBASIC1.96□□□□□ -2.1
VAMP4O75379 MIR30A-201ENST00000385092 71 ntBASIC1.96□□□□□ -2.1
VAMP4O75379 RNA5SP89-201ENST00000410300 108 ntBASIC1.96□□□□□ -2.1
VAMP4O75379 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.96□□□□□ -2.1
VAMP4O75379 SNORD111.1-201ENST00000516421 86 ntBASIC1.96□□□□□ -2.1
VAMP4O75379 RNU6-922P-201ENST00000516753 99 ntBASIC1.96□□□□□ -2.1
VAMP4O75379 MIR548AE2-201ENST00000583456 67 ntBASIC1.96□□□□□ -2.1
VAMP4O75379 WWP1P1-201ENST00000466609 2769 ntBASIC1.96□□□□□ -2.1
VAMP4O75379 SNORA51.5-201ENST00000384126 131 ntBASIC1.95□□□□□ -2.1
VAMP4O75379 Y_RNA.507-201ENST00000384500 99 ntBASIC1.95□□□□□ -2.1
VAMP4O75379 SNORD77B-201ENST00000391112 67 ntBASIC1.95□□□□□ -2.1
VAMP4O75379 HSPE1P24-201ENST00000450782 238 ntBASIC1.95□□□□□ -2.1
VAMP4O75379 snoU13.9-201ENST00000458927 103 ntBASIC1.95□□□□□ -2.1
VAMP4O75379 CYP3A52P-201ENST00000563326 91 ntBASIC1.95□□□□□ -2.1
VAMP4O75379 BX248123.2-201ENST00000606318 124 ntBASIC1.95□□□□□ -2.1
VAMP4O75379 Y_RNA.773-201ENST00000607168 90 ntBASIC1.95□□□□□ -2.1
VAMP4O75379 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.95□□□□□ -2.1
VAMP4O75379 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.94□□□□□ -2.1
VAMP4O75379 SNORD33-201ENST00000362761 85 ntBASIC1.94□□□□□ -2.1
VAMP4O75379 SNORD38B-201ENST00000384690 67 ntBASIC1.94□□□□□ -2.1
VAMP4O75379 RNU6-816P-201ENST00000390914 107 ntBASIC1.94□□□□□ -2.1
VAMP4O75379 RNU6-1268P-201ENST00000391214 107 ntBASIC1.94□□□□□ -2.1
VAMP4O75379 RNU6-1239P-201ENST00000391310 107 ntBASIC1.94□□□□□ -2.1
VAMP4O75379 RPL39P25-201ENST00000449384 154 ntBASIC1.94□□□□□ -2.1
VAMP4O75379 AC009474.2-201ENST00000451383 136 ntBASIC1.94□□□□□ -2.1
VAMP4O75379 MIR1270-201ENST00000459320 83 ntBASIC1.94□□□□□ -2.1
VAMP4O75379 RNU6-970P-201ENST00000516312 107 ntBASIC1.94□□□□□ -2.1
VAMP4O75379 MIR3192-201ENST00000584920 77 ntBASIC1.94□□□□□ -2.1
VAMP4O75379 SNORD38B-202ENST00000625943 69 ntBASIC1.94□□□□□ -2.1
VAMP4O75379 RNU6-1298P-201ENST00000362456 101 ntBASIC1.93□□□□□ -2.1
VAMP4O75379 SNORD1A-201ENST00000364968 72 ntBASIC1.93□□□□□ -2.1
VAMP4O75379 MIR517C-201ENST00000385103 95 ntBASIC1.93□□□□□ -2.1
VAMP4O75379 RNU4-62P-201ENST00000410125 130 ntBASIC1.93□□□□□ -2.1
VAMP4O75379 AC108667.1-201ENST00000428618 249 ntBASIC1.93□□□□□ -2.1
VAMP4O75379 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.93□□□□□ -2.1
VAMP4O75379 AL096861.1-201ENST00000610899 123 ntBASIC1.93□□□□□ -2.1
VAMP4O75379 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.92□□□□□ -2.1
VAMP4O75379 RNU7-35P-201ENST00000517174 62 ntBASIC1.92□□□□□ -2.1
VAMP4O75379 RNU4-67P-201ENST00000364569 141 ntBASIC1.91□□□□□ -2.1
VAMP4O75379 MIR320A-201ENST00000385302 82 ntBASIC1.91□□□□□ -2.1
VAMP4O75379 MIR1304-201ENST00000408243 91 ntBASIC1.91□□□□□ -2.1
VAMP4O75379 AC245047.7-201ENST00000440265 293 ntBASIC1.91□□□□□ -2.1
VAMP4O75379 AL133373.1-201ENST00000497098 94 ntBASIC1.91□□□□□ -2.1
VAMP4O75379 SNORD53B-201ENST00000577887 78 ntBASIC1.91□□□□□ -2.1
VAMP4O75379 PRELID3BP2-201ENST00000605362 201 ntBASIC1.91□□□□□ -2.1
VAMP4O75379 MIR1255B1-201ENST00000636325 63 ntBASIC1.91□□□□□ -2.1
VAMP4O75379 RNU6-616P-201ENST00000384353 107 ntBASIC1.9□□□□□ -2.11
VAMP4O75379 Y_RNA.544-201ENST00000384650 113 ntBASIC1.9□□□□□ -2.11
VAMP4O75379 RNU6-1086P-201ENST00000410930 100 ntBASIC1.9□□□□□ -2.11
VAMP4O75379 AC090844.1-201ENST00000422019 156 ntBASIC1.9□□□□□ -2.11
VAMP4O75379 AC079140.2-201ENST00000506193 142 ntBASIC1.9□□□□□ -2.11
VAMP4O75379 RNU6-1018P-201ENST00000516577 106 ntBASIC1.9□□□□□ -2.11
VAMP4O75379 Y_RNA.694-201ENST00000516677 117 ntBASIC1.9□□□□□ -2.11
VAMP4O75379 RNU6-537P-201ENST00000517277 103 ntBASIC1.9□□□□□ -2.11
VAMP4O75379 AP001318.4-201ENST00000616637 121 ntBASIC1.9□□□□□ -2.11
VAMP4O75379 MIR8063-201ENST00000621930 81 ntBASIC1.9□□□□□ -2.11
VAMP4O75379 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
VAMP4O75379 RNU6-409P-201ENST00000384114 104 ntBASIC1.89□□□□□ -2.11
VAMP4O75379 RNU6-342P-201ENST00000384521 104 ntBASIC1.89□□□□□ -2.11
VAMP4O75379 SNORA67.6-201ENST00000391093 99 ntBASIC1.89□□□□□ -2.11
VAMP4O75379 MIR1302-7-201ENST00000408841 72 ntBASIC1.89□□□□□ -2.11
VAMP4O75379 RNU6-733P-201ENST00000410759 104 ntBASIC1.89□□□□□ -2.11
VAMP4O75379 RPL39P39-201ENST00000455840 151 ntBASIC1.89□□□□□ -2.11
VAMP4O75379 AC005908.1-201ENST00000468701 347 ntBASIC1.89□□□□□ -2.11
VAMP4O75379 RNA5SP458-201ENST00000516188 119 ntBASIC1.89□□□□□ -2.11
VAMP4O75379 RNU6-904P-201ENST00000516206 101 ntBASIC1.89□□□□□ -2.11
VAMP4O75379 AP003716.2-201ENST00000528260 108 ntBASIC1.89□□□□□ -2.11
VAMP4O75379 MIR3122-201ENST00000577243 73 ntBASIC1.89□□□□□ -2.11
VAMP4O75379 AP000942.3-201ENST00000603702 160 ntBASIC1.89□□□□□ -2.11
VAMP4O75379 FAM71BP1-201ENST00000604431 523 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms