Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 MIR6857-201ENST00000613267 93 ntBASIC1.21□□□□□ -2.22
CACNA1FO60840 Y_RNA.291-201ENST00000364886 113 ntBASIC1.2□□□□□ -2.22
CACNA1FO60840 Y_RNA.528-201ENST00000384575 108 ntBASIC1.2□□□□□ -2.22
CACNA1FO60840 RNU6-1067P-201ENST00000384752 107 ntBASIC1.2□□□□□ -2.22
CACNA1FO60840 MIR520C-201ENST00000385005 87 ntBASIC1.2□□□□□ -2.22
CACNA1FO60840 SNORD28B-201ENST00000390993 75 ntBASIC1.2□□□□□ -2.22
CACNA1FO60840 AC063976.4-201ENST00000421971 163 ntBASIC1.2□□□□□ -2.22
CACNA1FO60840 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.2□□□□□ -2.22
CACNA1FO60840 CYCTP-201ENST00000504253 315 ntBASIC1.2□□□□□ -2.22
CACNA1FO60840 RNU7-123P-201ENST00000515911 60 ntBASIC1.2□□□□□ -2.22
CACNA1FO60840 MIR4305-201ENST00000583252 102 ntBASIC1.2□□□□□ -2.22
CACNA1FO60840 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.2□□□□□ -2.22
CACNA1FO60840 MTND5P18-201ENST00000445624 1801 ntBASIC1.2□□□□□ -2.22
CACNA1FO60840 SNORD1A-201ENST00000364968 72 ntBASIC1.19□□□□□ -2.22
CACNA1FO60840 SNORD24-201ENST00000383884 75 ntBASIC1.19□□□□□ -2.22
CACNA1FO60840 RPS3AP1-201ENST00000413190 320 ntBASIC1.19□□□□□ -2.22
CACNA1FO60840 MTATP6P21-201ENST00000440681 189 ntBASIC1.19□□□□□ -2.22
CACNA1FO60840 RNU6-412P-201ENST00000516434 106 ntBASIC1.19□□□□□ -2.22
CACNA1FO60840 Y_RNA.709-201ENST00000516952 92 ntBASIC1.19□□□□□ -2.22
CACNA1FO60840 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CACNA1FO60840 SNORA63.4-201ENST00000362763 126 ntBASIC1.19□□□□□ -2.22
CACNA1FO60840 RNU6-476P-201ENST00000384726 107 ntBASIC1.19□□□□□ -2.22
CACNA1FO60840 MIR759-201ENST00000390224 91 ntBASIC1.19□□□□□ -2.22
CACNA1FO60840 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CACNA1FO60840 RNU6-830P-201ENST00000516353 107 ntBASIC1.19□□□□□ -2.22
CACNA1FO60840 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.18□□□□□ -2.22
CACNA1FO60840 Y_RNA.205-201ENST00000364128 113 ntBASIC1.18□□□□□ -2.22
CACNA1FO60840 SNORA70.7-201ENST00000384159 133 ntBASIC1.18□□□□□ -2.22
CACNA1FO60840 AL451046.2-201ENST00000403074 277 ntBASIC1.18□□□□□ -2.22
CACNA1FO60840 HSPE1P24-201ENST00000450782 238 ntBASIC1.18□□□□□ -2.22
CACNA1FO60840 RNU7-73P-201ENST00000458743 63 ntBASIC1.18□□□□□ -2.22
CACNA1FO60840 AC099513.1-201ENST00000490423 301 ntBASIC1.18□□□□□ -2.22
CACNA1FO60840 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.18□□□□□ -2.22
CACNA1FO60840 RNU6-917P-201ENST00000516294 104 ntBASIC1.18□□□□□ -2.22
CACNA1FO60840 RNU6-970P-201ENST00000516312 107 ntBASIC1.18□□□□□ -2.22
CACNA1FO60840 RNU7-43P-201ENST00000516554 64 ntBASIC1.18□□□□□ -2.22
CACNA1FO60840 SNORD36C-201ENST00000516733 66 ntBASIC1.18□□□□□ -2.22
CACNA1FO60840 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.18□□□□□ -2.22
CACNA1FO60840 Y_RNA.261-201ENST00000364631 102 ntBASIC1.17□□□□□ -2.22
CACNA1FO60840 RNU1-133P-201ENST00000364867 167 ntBASIC1.17□□□□□ -2.22
CACNA1FO60840 SNORA22-201ENST00000383907 134 ntBASIC1.17□□□□□ -2.22
CACNA1FO60840 MIR598-201ENST00000384868 97 ntBASIC1.17□□□□□ -2.22
CACNA1FO60840 MT-TI-201ENST00000387365 69 ntBASIC1.17□□□□□ -2.22
CACNA1FO60840 RNU6-1319P-201ENST00000390855 104 ntBASIC1.17□□□□□ -2.22
CACNA1FO60840 RNU6-747P-201ENST00000390928 104 ntBASIC1.17□□□□□ -2.22
CACNA1FO60840 RNU6-241P-201ENST00000391148 104 ntBASIC1.17□□□□□ -2.22
CACNA1FO60840 SNORA26.6-201ENST00000391256 115 ntBASIC1.17□□□□□ -2.22
CACNA1FO60840 MIR1263-201ENST00000408324 86 ntBASIC1.17□□□□□ -2.22
CACNA1FO60840 RNU6-177P-201ENST00000411257 104 ntBASIC1.17□□□□□ -2.22
CACNA1FO60840 RNU7-96P-201ENST00000459535 64 ntBASIC1.17□□□□□ -2.22
CACNA1FO60840 AC079140.2-201ENST00000506193 142 ntBASIC1.17□□□□□ -2.22
CACNA1FO60840 PDCD5P2-201ENST00000507570 312 ntBASIC1.17□□□□□ -2.22
CACNA1FO60840 Y_RNA.712-201ENST00000517011 92 ntBASIC1.17□□□□□ -2.22
CACNA1FO60840 AC008133.2-201ENST00000624540 351 ntBASIC1.17□□□□□ -2.22
CACNA1FO60840 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CACNA1FO60840 MIR424-201ENST00000362227 98 ntBASIC1.17□□□□□ -2.22
CACNA1FO60840 RNU6-1123P-201ENST00000362347 106 ntBASIC1.17□□□□□ -2.22
CACNA1FO60840 snoU13.16-201ENST00000459350 104 ntBASIC1.17□□□□□ -2.22
CACNA1FO60840 RNU2-35P-201ENST00000516446 142 ntBASIC1.17□□□□□ -2.22
CACNA1FO60840 RNU6-589P-201ENST00000516485 107 ntBASIC1.17□□□□□ -2.22
CACNA1FO60840 MIR4778-201ENST00000577635 80 ntBASIC1.17□□□□□ -2.22
CACNA1FO60840 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.17□□□□□ -2.22
CACNA1FO60840 HSPE1P19-201ENST00000603327 295 ntBASIC1.17□□□□□ -2.22
CACNA1FO60840 FAM71BP1-201ENST00000604431 523 ntBASIC1.17□□□□□ -2.22
CACNA1FO60840 MIR3914-2-201ENST00000637339 95 ntBASIC1.17□□□□□ -2.22
CACNA1FO60840 SNORD33-201ENST00000362761 85 ntBASIC1.16□□□□□ -2.22
CACNA1FO60840 MIRLET7F2-201ENST00000385277 83 ntBASIC1.16□□□□□ -2.22
CACNA1FO60840 RNA5SP136-201ENST00000410906 107 ntBASIC1.16□□□□□ -2.22
CACNA1FO60840 AL022718.1-201ENST00000412004 84 ntBASIC1.16□□□□□ -2.22
CACNA1FO60840 JTBP1-201ENST00000441314 247 ntBASIC1.16□□□□□ -2.22
CACNA1FO60840 RNU7-113P-201ENST00000459273 62 ntBASIC1.16□□□□□ -2.22
CACNA1FO60840 SNORA31.4-201ENST00000516049 129 ntBASIC1.16□□□□□ -2.22
CACNA1FO60840 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.16□□□□□ -2.22
CACNA1FO60840 Y_RNA.281-201ENST00000364774 94 ntBASIC1.16□□□□□ -2.22
CACNA1FO60840 Y_RNA.454-201ENST00000384224 113 ntBASIC1.16□□□□□ -2.22
CACNA1FO60840 SNORA74.3-201ENST00000517108 154 ntBASIC1.16□□□□□ -2.22
CACNA1FO60840 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.16□□□□□ -2.22
CACNA1FO60840 AL121890.5-201ENST00000620848 304 ntBASIC1.16□□□□□ -2.22
CACNA1FO60840 MIR376A2-201ENST00000636782 80 ntBASIC1.16□□□□□ -2.22
CACNA1FO60840 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CACNA1FO60840 RNA5SP259-201ENST00000365541 109 ntBASIC1.15□□□□□ -2.23
CACNA1FO60840 Y_RNA.531-201ENST00000384589 121 ntBASIC1.15□□□□□ -2.23
CACNA1FO60840 AL357312.1-201ENST00000603879 298 ntBASIC1.15□□□□□ -2.23
CACNA1FO60840 GHRLOS.1-201ENST00000610995 70 ntBASIC1.15□□□□□ -2.23
CACNA1FO60840 AC243994.1-201ENST00000618627 109 ntBASIC1.15□□□□□ -2.23
CACNA1FO60840 U6.95-201ENST00000636931 70 ntBASIC1.15□□□□□ -2.23
CACNA1FO60840 SNORA1.1-201ENST00000364671 133 ntBASIC1.14□□□□□ -2.23
CACNA1FO60840 RNU6-1107P-201ENST00000364817 104 ntBASIC1.14□□□□□ -2.23
CACNA1FO60840 MIR653-201ENST00000385279 96 ntBASIC1.14□□□□□ -2.23
CACNA1FO60840 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.14□□□□□ -2.23
CACNA1FO60840 Y_RNA.213-201ENST00000364178 111 ntBASIC1.14□□□□□ -2.23
CACNA1FO60840 Y_RNA.374-201ENST00000365606 101 ntBASIC1.14□□□□□ -2.23
CACNA1FO60840 RNU6-429P-201ENST00000384582 108 ntBASIC1.14□□□□□ -2.23
CACNA1FO60840 MIR548A1-201ENST00000385041 97 ntBASIC1.14□□□□□ -2.23
CACNA1FO60840 RNU6-1064P-201ENST00000410626 104 ntBASIC1.14□□□□□ -2.23
CACNA1FO60840 POLR2J4-204ENST00000418424 324 ntBASIC1.14□□□□□ -2.23
CACNA1FO60840 RNU6-893P-201ENST00000458841 100 ntBASIC1.14□□□□□ -2.23
CACNA1FO60840 COX6CP6-201ENST00000490840 228 ntBASIC1.14□□□□□ -2.23
CACNA1FO60840 RNU6-902P-201ENST00000517212 91 ntBASIC1.14□□□□□ -2.23
CACNA1FO60840 MIR3937-201ENST00000580135 106 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms