Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 Y_RNA.757-201ENST00000578934 114 ntBASIC1.29□□□□□ -2.2
SNX2O60749 AC012676.2-201ENST00000619258 186 ntBASIC1.29□□□□□ -2.2
SNX2O60749 TUG1_4.1-201ENST00000619464 181 ntBASIC1.29□□□□□ -2.2
SNX2O60749 SNORD38B-202ENST00000625943 69 ntBASIC1.29□□□□□ -2.2
SNX2O60749 RNU6-613P-201ENST00000410412 108 ntBASIC1.28□□□□□ -2.2
SNX2O60749 RNA5SP261-201ENST00000410536 106 ntBASIC1.28□□□□□ -2.2
SNX2O60749 AL591704.2-201ENST00000421658 181 ntBASIC1.28□□□□□ -2.2
SNX2O60749 AL158147.1-201ENST00000443970 75 ntBASIC1.28□□□□□ -2.2
SNX2O60749 AC004223.1-201ENST00000479840 271 ntBASIC1.28□□□□□ -2.2
SNX2O60749 MIR4305-201ENST00000583252 102 ntBASIC1.28□□□□□ -2.2
SNX2O60749 AC021443.1-201ENST00000604478 211 ntBASIC1.28□□□□□ -2.2
SNX2O60749 AC008163.1-202ENST00000636004 2889 ntBASIC1.27□□□□□ -2.21
SNX2O60749 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SNX2O60749 AL512326.2-201ENST00000426359 151 ntBASIC1.27□□□□□ -2.21
SNX2O60749 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.27□□□□□ -2.21
SNX2O60749 AC068338.1-201ENST00000565567 176 ntBASIC1.27□□□□□ -2.21
SNX2O60749 AC023827.1-201ENST00000569247 97 ntBASIC1.27□□□□□ -2.21
SNX2O60749 MIR6078-201ENST00000611069 100 ntBASIC1.27□□□□□ -2.21
SNX2O60749 AL137067.1-201ENST00000615933 120 ntBASIC1.27□□□□□ -2.21
SNX2O60749 MIR337-201ENST00000362281 93 ntBASIC1.26□□□□□ -2.21
SNX2O60749 AC063976.4-201ENST00000421971 163 ntBASIC1.26□□□□□ -2.21
SNX2O60749 AC002429.1-201ENST00000437672 148 ntBASIC1.26□□□□□ -2.21
SNX2O60749 RNU7-164P-201ENST00000459221 62 ntBASIC1.26□□□□□ -2.21
SNX2O60749 AC036111.3-201ENST00000526389 112 ntBASIC1.26□□□□□ -2.21
SNX2O60749 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.26□□□□□ -2.21
SNX2O60749 AL391516.1-201ENST00000554380 2449 ntBASIC1.26□□□□□ -2.21
SNX2O60749 SNORA40.6-201ENST00000391153 128 ntBASIC1.25□□□□□ -2.21
SNX2O60749 TMSB4XP3-201ENST00000445144 114 ntBASIC1.25□□□□□ -2.21
SNX2O60749 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.25□□□□□ -2.21
SNX2O60749 RNU7-123P-201ENST00000515911 60 ntBASIC1.25□□□□□ -2.21
SNX2O60749 RN7SKP19-201ENST00000516016 252 ntBASIC1.25□□□□□ -2.21
SNX2O60749 Y_RNA.676-201ENST00000516393 96 ntBASIC1.25□□□□□ -2.21
SNX2O60749 RNU6-1234P-201ENST00000516877 103 ntBASIC1.25□□□□□ -2.21
SNX2O60749 MIR3910-1-201ENST00000580936 111 ntBASIC1.25□□□□□ -2.21
SNX2O60749 uc_338.6-201ENST00000613544 171 ntBASIC1.25□□□□□ -2.21
SNX2O60749 MIR6740-201ENST00000618268 113 ntBASIC1.25□□□□□ -2.21
SNX2O60749 RNU6-647P-201ENST00000364243 107 ntBASIC1.24□□□□□ -2.21
SNX2O60749 Y_RNA.470-201ENST00000384307 117 ntBASIC1.24□□□□□ -2.21
SNX2O60749 MT-TN-201ENST00000387400 73 ntBASIC1.24□□□□□ -2.21
SNX2O60749 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.24□□□□□ -2.21
SNX2O60749 Y_RNA.617-201ENST00000410920 90 ntBASIC1.24□□□□□ -2.21
SNX2O60749 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.24□□□□□ -2.21
SNX2O60749 RNU7-90P-201ENST00000459216 62 ntBASIC1.24□□□□□ -2.21
SNX2O60749 RNU6-781P-201ENST00000516377 101 ntBASIC1.24□□□□□ -2.21
SNX2O60749 MIR4264-201ENST00000583520 66 ntBASIC1.24□□□□□ -2.21
SNX2O60749 AP000753.3-201ENST00000604083 169 ntBASIC1.24□□□□□ -2.21
SNX2O60749 RNY1P10-201ENST00000363268 113 ntBASIC1.23□□□□□ -2.21
SNX2O60749 Y_RNA.218-201ENST00000364218 104 ntBASIC1.23□□□□□ -2.21
SNX2O60749 Y_RNA.298-201ENST00000364960 107 ntBASIC1.23□□□□□ -2.21
SNX2O60749 RNU6-580P-201ENST00000365159 107 ntBASIC1.23□□□□□ -2.21
SNX2O60749 Y_RNA.354-201ENST00000365448 111 ntBASIC1.23□□□□□ -2.21
SNX2O60749 Y_RNA.525-201ENST00000384570 113 ntBASIC1.23□□□□□ -2.21
SNX2O60749 SNORA2B-201ENST00000384583 137 ntBASIC1.23□□□□□ -2.21
SNX2O60749 RNU6-1104P-201ENST00000384723 104 ntBASIC1.23□□□□□ -2.21
SNX2O60749 MIR200A-201ENST00000384875 90 ntBASIC1.23□□□□□ -2.21
SNX2O60749 MIR588-201ENST00000384900 83 ntBASIC1.23□□□□□ -2.21
SNX2O60749 AL022718.1-201ENST00000412004 84 ntBASIC1.23□□□□□ -2.21
SNX2O60749 RNU7-107P-201ENST00000459121 61 ntBASIC1.23□□□□□ -2.21
SNX2O60749 snoU13.2-201ENST00000459201 104 ntBASIC1.23□□□□□ -2.21
SNX2O60749 snoU13.21-201ENST00000459368 105 ntBASIC1.23□□□□□ -2.21
SNX2O60749 OR2A41P-201ENST00000473586 105 ntBASIC1.23□□□□□ -2.21
SNX2O60749 RN7SKP179-201ENST00000516126 217 ntBASIC1.23□□□□□ -2.21
SNX2O60749 AC004812.1-201ENST00000540773 146 ntBASIC1.23□□□□□ -2.21
SNX2O60749 AC022523.2-201ENST00000561045 150 ntBASIC1.23□□□□□ -2.21
SNX2O60749 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.23□□□□□ -2.21
SNX2O60749 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.22□□□□□ -2.21
SNX2O60749 MIR539-201ENST00000365690 78 ntBASIC1.22□□□□□ -2.21
SNX2O60749 RNU6-342P-201ENST00000384521 104 ntBASIC1.22□□□□□ -2.21
SNX2O60749 RNU6-1237P-201ENST00000384777 107 ntBASIC1.22□□□□□ -2.21
SNX2O60749 MRPL35P3-201ENST00000421557 364 ntBASIC1.22□□□□□ -2.21
SNX2O60749 RNU7-113P-201ENST00000459273 62 ntBASIC1.22□□□□□ -2.21
SNX2O60749 AC113410.1-201ENST00000505029 247 ntBASIC1.22□□□□□ -2.21
SNX2O60749 UBL5P1-201ENST00000507979 193 ntBASIC1.22□□□□□ -2.21
SNX2O60749 RNY4P20-201ENST00000516678 93 ntBASIC1.22□□□□□ -2.21
SNX2O60749 MIR4661-201ENST00000582720 75 ntBASIC1.22□□□□□ -2.21
SNX2O60749 MIR3660-201ENST00000584845 100 ntBASIC1.22□□□□□ -2.21
SNX2O60749 MIR377-201ENST00000362145 69 ntBASIC1.21□□□□□ -2.22
SNX2O60749 Y_RNA.71-201ENST00000362892 104 ntBASIC1.21□□□□□ -2.22
SNX2O60749 Y_RNA.168-201ENST00000363740 102 ntBASIC1.21□□□□□ -2.22
SNX2O60749 SNORD113.3-201ENST00000364630 78 ntBASIC1.21□□□□□ -2.22
SNX2O60749 RNU6-81P-201ENST00000365608 104 ntBASIC1.21□□□□□ -2.22
SNX2O60749 Y_RNA.531-201ENST00000384589 121 ntBASIC1.21□□□□□ -2.22
SNX2O60749 MIR1263-201ENST00000408324 86 ntBASIC1.21□□□□□ -2.22
SNX2O60749 RNU6-893P-201ENST00000458841 100 ntBASIC1.21□□□□□ -2.22
SNX2O60749 RNU7-62P-201ENST00000458856 62 ntBASIC1.21□□□□□ -2.22
SNX2O60749 RNU6-94P-201ENST00000607728 107 ntBASIC1.21□□□□□ -2.22
SNX2O60749 AC106800.4-201ENST00000614905 153 ntBASIC1.21□□□□□ -2.22
SNX2O60749 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SNX2O60749 RNU6-392P-201ENST00000364926 101 ntBASIC1.2□□□□□ -2.22
SNX2O60749 SNORD114-24-201ENST00000365029 72 ntBASIC1.2□□□□□ -2.22
SNX2O60749 RNU6-1061P-201ENST00000516530 99 ntBASIC1.2□□□□□ -2.22
SNX2O60749 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SNX2O60749 SNORD115-2-201ENST00000362842 82 ntBASIC1.19□□□□□ -2.22
SNX2O60749 SNORD115-20-201ENST00000365099 82 ntBASIC1.19□□□□□ -2.22
SNX2O60749 RNU6-53P-201ENST00000365367 106 ntBASIC1.19□□□□□ -2.22
SNX2O60749 SNORA18-201ENST00000384416 132 ntBASIC1.19□□□□□ -2.22
SNX2O60749 RNU6-959P-201ENST00000384671 107 ntBASIC1.19□□□□□ -2.22
SNX2O60749 MIR563-201ENST00000385080 79 ntBASIC1.19□□□□□ -2.22
SNX2O60749 MT-TI-201ENST00000387365 69 ntBASIC1.19□□□□□ -2.22
SNX2O60749 RNU6-1165P-201ENST00000410119 107 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms