Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 Y_RNA.540-201ENST00000384638 111 ntBASIC1.26□□□□□ -2.21
CTNND1O60716 RNU6-205P-201ENST00000390858 107 ntBASIC1.26□□□□□ -2.21
CTNND1O60716 MIR548J-201ENST00000408833 112 ntBASIC1.26□□□□□ -2.21
CTNND1O60716 RNU6-893P-201ENST00000458841 100 ntBASIC1.26□□□□□ -2.21
CTNND1O60716 RNU6-1223P-201ENST00000517124 104 ntBASIC1.26□□□□□ -2.21
CTNND1O60716 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CTNND1O60716 RNY1P11-201ENST00000363759 113 ntBASIC1.25□□□□□ -2.21
CTNND1O60716 SNORD114-24-201ENST00000365029 72 ntBASIC1.25□□□□□ -2.21
CTNND1O60716 MIR1285-1-201ENST00000408593 84 ntBASIC1.25□□□□□ -2.21
CTNND1O60716 SNORD124-201ENST00000459577 104 ntBASIC1.25□□□□□ -2.21
CTNND1O60716 RNU6-1212P-201ENST00000517023 104 ntBASIC1.25□□□□□ -2.21
CTNND1O60716 MIR151B-201ENST00000584249 96 ntBASIC1.25□□□□□ -2.21
CTNND1O60716 HSPE1P19-201ENST00000603327 295 ntBASIC1.25□□□□□ -2.21
CTNND1O60716 MIR513C-201ENST00000401352 84 ntBASIC1.24□□□□□ -2.21
CTNND1O60716 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.24□□□□□ -2.21
CTNND1O60716 RNU2-60P-201ENST00000517290 128 ntBASIC1.24□□□□□ -2.21
CTNND1O60716 AC011603.4-201ENST00000611325 277 ntBASIC1.24□□□□□ -2.21
CTNND1O60716 AC021753.1-201ENST00000635724 168 ntBASIC1.24□□□□□ -2.21
CTNND1O60716 RNU6-349P-201ENST00000362402 107 ntBASIC1.23□□□□□ -2.21
CTNND1O60716 Y_RNA.400-201ENST00000383963 111 ntBASIC1.23□□□□□ -2.21
CTNND1O60716 FABP5P4-201ENST00000437203 171 ntBASIC1.23□□□□□ -2.21
CTNND1O60716 RNU7-62P-201ENST00000458856 62 ntBASIC1.23□□□□□ -2.21
CTNND1O60716 SNORD114-21-201ENST00000606412 72 ntBASIC1.23□□□□□ -2.21
CTNND1O60716 AC012676.2-201ENST00000619258 186 ntBASIC1.23□□□□□ -2.21
CTNND1O60716 MIR373-201ENST00000362273 69 ntBASIC1.22□□□□□ -2.21
CTNND1O60716 MIR588-201ENST00000384900 83 ntBASIC1.22□□□□□ -2.21
CTNND1O60716 SNORD12C-201ENST00000386307 89 ntBASIC1.22□□□□□ -2.21
CTNND1O60716 AL603914.1-201ENST00000401964 204 ntBASIC1.22□□□□□ -2.21
CTNND1O60716 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.22□□□□□ -2.21
CTNND1O60716 RNU7-197P-201ENST00000458836 62 ntBASIC1.22□□□□□ -2.21
CTNND1O60716 snoU13.2-201ENST00000459201 104 ntBASIC1.22□□□□□ -2.21
CTNND1O60716 MIR548X2-201ENST00000579776 100 ntBASIC1.22□□□□□ -2.21
CTNND1O60716 RNU6-94P-201ENST00000607728 107 ntBASIC1.22□□□□□ -2.21
CTNND1O60716 MIR6515-201ENST00000619843 57 ntBASIC1.22□□□□□ -2.21
CTNND1O60716 MIR6841-201ENST00000637129 72 ntBASIC1.22□□□□□ -2.21
CTNND1O60716 SNORA22.1-201ENST00000362701 134 ntBASIC1.21□□□□□ -2.22
CTNND1O60716 RNU4-16P-201ENST00000364737 141 ntBASIC1.21□□□□□ -2.22
CTNND1O60716 MIR942-201ENST00000401111 86 ntBASIC1.21□□□□□ -2.22
CTNND1O60716 RNU6-994P-201ENST00000410507 111 ntBASIC1.21□□□□□ -2.22
CTNND1O60716 RNU6-255P-201ENST00000516957 105 ntBASIC1.21□□□□□ -2.22
CTNND1O60716 MTND5P41-201ENST00000517498 206 ntBASIC1.21□□□□□ -2.22
CTNND1O60716 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.21□□□□□ -2.22
CTNND1O60716 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
CTNND1O60716 Y_RNA.215-201ENST00000364204 112 ntBASIC1.2□□□□□ -2.22
CTNND1O60716 RNU6-209P-201ENST00000384118 107 ntBASIC1.2□□□□□ -2.22
CTNND1O60716 AC067940.1-201ENST00000458411 300 ntBASIC1.2□□□□□ -2.22
CTNND1O60716 Y_RNA.690-201ENST00000516603 95 ntBASIC1.2□□□□□ -2.22
CTNND1O60716 MIR6740-201ENST00000618268 113 ntBASIC1.2□□□□□ -2.22
CTNND1O60716 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.2□□□□□ -2.22
CTNND1O60716 Y_RNA.170-201ENST00000363746 110 ntBASIC1.19□□□□□ -2.22
CTNND1O60716 RNU6-309P-201ENST00000364573 106 ntBASIC1.19□□□□□ -2.22
CTNND1O60716 RNU6-690P-201ENST00000365242 106 ntBASIC1.19□□□□□ -2.22
CTNND1O60716 OR2A41P-201ENST00000473586 105 ntBASIC1.19□□□□□ -2.22
CTNND1O60716 Y_RNA.686-201ENST00000516548 134 ntBASIC1.19□□□□□ -2.22
CTNND1O60716 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CTNND1O60716 AL391516.1-201ENST00000554380 2449 ntBASIC1.18□□□□□ -2.22
CTNND1O60716 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CTNND1O60716 RNU4-38P-201ENST00000364472 129 ntBASIC1.18□□□□□ -2.22
CTNND1O60716 RNU6-934P-201ENST00000365154 107 ntBASIC1.18□□□□□ -2.22
CTNND1O60716 MIR613-201ENST00000385248 95 ntBASIC1.18□□□□□ -2.22
CTNND1O60716 RNU6-460P-201ENST00000391158 108 ntBASIC1.18□□□□□ -2.22
CTNND1O60716 POLR2J4-204ENST00000418424 324 ntBASIC1.18□□□□□ -2.22
CTNND1O60716 SNORA25.12-201ENST00000516202 82 ntBASIC1.18□□□□□ -2.22
CTNND1O60716 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.18□□□□□ -2.22
CTNND1O60716 AC211469.2-201ENST00000605461 205 ntBASIC1.18□□□□□ -2.22
CTNND1O60716 MIR6857-201ENST00000613267 93 ntBASIC1.18□□□□□ -2.22
CTNND1O60716 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
CTNND1O60716 Y_RNA.506-201ENST00000384494 102 ntBASIC1.17□□□□□ -2.22
CTNND1O60716 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.17□□□□□ -2.22
CTNND1O60716 RNU6-1165P-201ENST00000410119 107 ntBASIC1.17□□□□□ -2.22
CTNND1O60716 RNA5SP144-201ENST00000410846 116 ntBASIC1.17□□□□□ -2.22
CTNND1O60716 MIR18B-201ENST00000454574 71 ntBASIC1.17□□□□□ -2.22
CTNND1O60716 U7.7-201ENST00000459276 60 ntBASIC1.17□□□□□ -2.22
CTNND1O60716 Y_RNA.651-201ENST00000459380 103 ntBASIC1.17□□□□□ -2.22
CTNND1O60716 RNU7-200P-201ENST00000516105 62 ntBASIC1.17□□□□□ -2.22
CTNND1O60716 Y_RNA.757-201ENST00000578934 114 ntBASIC1.17□□□□□ -2.22
CTNND1O60716 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.17□□□□□ -2.22
CTNND1O60716 MIR1-1-201ENST00000362147 71 ntBASIC1.16□□□□□ -2.22
CTNND1O60716 RNU6-508P-201ENST00000363231 103 ntBASIC1.16□□□□□ -2.22
CTNND1O60716 RNU6-1062P-201ENST00000383908 107 ntBASIC1.16□□□□□ -2.22
CTNND1O60716 Y_RNA.488-201ENST00000384403 102 ntBASIC1.16□□□□□ -2.22
CTNND1O60716 MIR532-201ENST00000385025 91 ntBASIC1.16□□□□□ -2.22
CTNND1O60716 MIR563-201ENST00000385080 79 ntBASIC1.16□□□□□ -2.22
CTNND1O60716 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.16□□□□□ -2.22
CTNND1O60716 AL022718.1-201ENST00000412004 84 ntBASIC1.16□□□□□ -2.22
CTNND1O60716 RPS29P28-201ENST00000446439 141 ntBASIC1.16□□□□□ -2.22
CTNND1O60716 UBL5P1-201ENST00000507979 193 ntBASIC1.16□□□□□ -2.22
CTNND1O60716 RNU6-1110P-201ENST00000516462 101 ntBASIC1.16□□□□□ -2.22
CTNND1O60716 MIR4661-201ENST00000582720 75 ntBASIC1.16□□□□□ -2.22
CTNND1O60716 AL136317.1-201ENST00000612653 226 ntBASIC1.16□□□□□ -2.22
CTNND1O60716 AP001340.1-201ENST00000624405 217 ntBASIC1.16□□□□□ -2.22
CTNND1O60716 RPS26P5-201ENST00000418544 335 ntBASIC1.15□□□□□ -2.23
CTNND1O60716 snoU13.21-201ENST00000459368 105 ntBASIC1.15□□□□□ -2.23
CTNND1O60716 PDCD5P2-201ENST00000507570 312 ntBASIC1.15□□□□□ -2.23
CTNND1O60716 RNU6-240P-201ENST00000516098 97 ntBASIC1.15□□□□□ -2.23
CTNND1O60716 Y_RNA.692-201ENST00000516627 105 ntBASIC1.15□□□□□ -2.23
CTNND1O60716 AC133485.4-201ENST00000561835 220 ntBASIC1.15□□□□□ -2.23
CTNND1O60716 AC138907.4-201ENST00000570107 226 ntBASIC1.15□□□□□ -2.23
CTNND1O60716 MIR3973-201ENST00000579824 107 ntBASIC1.15□□□□□ -2.23
CTNND1O60716 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms