Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 AC023790.1-201ENST00000482174 347 ntBASIC1.53□□□□□ -2.16
KDM1AO60341 SEPT14P17-201ENST00000617978 177 ntBASIC1.53□□□□□ -2.16
KDM1AO60341 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.53□□□□□ -2.17
KDM1AO60341 RNU6-654P-201ENST00000364373 107 ntBASIC1.52□□□□□ -2.17
KDM1AO60341 Y_RNA.353-201ENST00000365440 108 ntBASIC1.52□□□□□ -2.17
KDM1AO60341 Y_RNA.363-201ENST00000365529 113 ntBASIC1.52□□□□□ -2.17
KDM1AO60341 RNU6-910P-201ENST00000390844 107 ntBASIC1.52□□□□□ -2.17
KDM1AO60341 SNORA75.2-201ENST00000391138 150 ntBASIC1.52□□□□□ -2.17
KDM1AO60341 SNORA75.3-201ENST00000391231 150 ntBASIC1.52□□□□□ -2.17
KDM1AO60341 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.52□□□□□ -2.17
KDM1AO60341 AC244023.1-201ENST00000426884 112 ntBASIC1.52□□□□□ -2.17
KDM1AO60341 RNA5SP33-201ENST00000516687 98 ntBASIC1.52□□□□□ -2.17
KDM1AO60341 SNORA31.24-201ENST00000517232 57 ntBASIC1.52□□□□□ -2.17
KDM1AO60341 AC242498.1-201ENST00000604134 111 ntBASIC1.52□□□□□ -2.17
KDM1AO60341 RNU1-17P-201ENST00000363022 152 ntBASIC1.51□□□□□ -2.17
KDM1AO60341 Y_RNA.299-201ENST00000364973 94 ntBASIC1.51□□□□□ -2.17
KDM1AO60341 RNU6-1104P-201ENST00000384723 104 ntBASIC1.51□□□□□ -2.17
KDM1AO60341 MIR759-201ENST00000390224 91 ntBASIC1.51□□□□□ -2.17
KDM1AO60341 MIR764-201ENST00000390811 85 ntBASIC1.51□□□□□ -2.17
KDM1AO60341 MIR3163-201ENST00000581592 73 ntBASIC1.51□□□□□ -2.17
KDM1AO60341 MIR548AE2-201ENST00000583456 67 ntBASIC1.51□□□□□ -2.17
KDM1AO60341 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.51□□□□□ -2.17
KDM1AO60341 SNORA80D-201ENST00000384488 135 ntBASIC1.5□□□□□ -2.17
KDM1AO60341 RNU6-205P-201ENST00000390858 107 ntBASIC1.5□□□□□ -2.17
KDM1AO60341 RNU4-69P-201ENST00000410677 143 ntBASIC1.5□□□□□ -2.17
KDM1AO60341 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.5□□□□□ -2.17
KDM1AO60341 AL670379.3-201ENST00000605040 251 ntBASIC1.5□□□□□ -2.17
KDM1AO60341 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
KDM1AO60341 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
KDM1AO60341 RNU6-834P-201ENST00000362367 110 ntBASIC1.49□□□□□ -2.17
KDM1AO60341 Y_RNA.330-201ENST00000365230 109 ntBASIC1.49□□□□□ -2.17
KDM1AO60341 SNORA18-201ENST00000384416 132 ntBASIC1.49□□□□□ -2.17
KDM1AO60341 RNU6-342P-201ENST00000384521 104 ntBASIC1.49□□□□□ -2.17
KDM1AO60341 MIR150-201ENST00000385048 84 ntBASIC1.49□□□□□ -2.17
KDM1AO60341 MIR548A3-201ENST00000385297 97 ntBASIC1.49□□□□□ -2.17
KDM1AO60341 RNA5SP95-201ENST00000410319 137 ntBASIC1.49□□□□□ -2.17
KDM1AO60341 AL591704.2-201ENST00000421658 181 ntBASIC1.49□□□□□ -2.17
KDM1AO60341 RNU7-62P-201ENST00000458856 62 ntBASIC1.49□□□□□ -2.17
KDM1AO60341 Y_RNA.649-201ENST00000459077 103 ntBASIC1.49□□□□□ -2.17
KDM1AO60341 snoU13.2-201ENST00000459201 104 ntBASIC1.49□□□□□ -2.17
KDM1AO60341 SNORD79.1-201ENST00000516069 84 ntBASIC1.49□□□□□ -2.17
KDM1AO60341 MIR7974-201ENST00000615835 79 ntBASIC1.49□□□□□ -2.17
KDM1AO60341 MIR6740-201ENST00000618268 113 ntBASIC1.49□□□□□ -2.17
KDM1AO60341 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
KDM1AO60341 Y_RNA.273-201ENST00000364703 102 ntBASIC1.48□□□□□ -2.17
KDM1AO60341 MT-TI-201ENST00000387365 69 ntBASIC1.48□□□□□ -2.17
KDM1AO60341 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.48□□□□□ -2.17
KDM1AO60341 RNA5SP237-201ENST00000410414 113 ntBASIC1.48□□□□□ -2.17
KDM1AO60341 RNU7-21P-201ENST00000459430 62 ntBASIC1.48□□□□□ -2.17
KDM1AO60341 SNORA70.22-201ENST00000517160 124 ntBASIC1.48□□□□□ -2.17
KDM1AO60341 Y_RNA.168-201ENST00000363740 102 ntBASIC1.47□□□□□ -2.17
KDM1AO60341 RNU6-60P-201ENST00000364792 103 ntBASIC1.47□□□□□ -2.17
KDM1AO60341 SNORA32-201ENST00000384072 121 ntBASIC1.47□□□□□ -2.17
KDM1AO60341 RNU6-476P-201ENST00000384726 107 ntBASIC1.47□□□□□ -2.17
KDM1AO60341 MIR588-201ENST00000384900 83 ntBASIC1.47□□□□□ -2.17
KDM1AO60341 MIR1304-201ENST00000408243 91 ntBASIC1.47□□□□□ -2.17
KDM1AO60341 Y_RNA.629-201ENST00000411368 105 ntBASIC1.47□□□□□ -2.17
KDM1AO60341 MRPL35P3-201ENST00000421557 364 ntBASIC1.47□□□□□ -2.17
KDM1AO60341 MTND5P34-201ENST00000568888 325 ntBASIC1.47□□□□□ -2.17
KDM1AO60341 AL662814.1-201ENST00000617364 121 ntBASIC1.47□□□□□ -2.17
KDM1AO60341 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
KDM1AO60341 MIR26B-201ENST00000362251 77 ntBASIC1.46□□□□□ -2.18
KDM1AO60341 RNA5SP327-201ENST00000362494 101 ntBASIC1.46□□□□□ -2.18
KDM1AO60341 SNORD26-201ENST00000384147 75 ntBASIC1.46□□□□□ -2.18
KDM1AO60341 MIR563-201ENST00000385080 79 ntBASIC1.46□□□□□ -2.18
KDM1AO60341 SNORD12-201ENST00000391002 90 ntBASIC1.46□□□□□ -2.18
KDM1AO60341 RNU6-735P-201ENST00000410612 107 ntBASIC1.46□□□□□ -2.18
KDM1AO60341 RNU6-1064P-201ENST00000410626 104 ntBASIC1.46□□□□□ -2.18
KDM1AO60341 RNU7-35P-201ENST00000517174 62 ntBASIC1.46□□□□□ -2.18
KDM1AO60341 AL512598.1-201ENST00000610158 273 ntBASIC1.46□□□□□ -2.18
KDM1AO60341 RNY4P6-201ENST00000363667 96 ntBASIC1.45□□□□□ -2.18
KDM1AO60341 RNU6-580P-201ENST00000365159 107 ntBASIC1.45□□□□□ -2.18
KDM1AO60341 RNU6-1056P-201ENST00000383996 107 ntBASIC1.45□□□□□ -2.18
KDM1AO60341 RNU6-1144P-201ENST00000384247 104 ntBASIC1.45□□□□□ -2.18
KDM1AO60341 SNORA2B-201ENST00000384583 137 ntBASIC1.45□□□□□ -2.18
KDM1AO60341 RNU6-1237P-201ENST00000384777 107 ntBASIC1.45□□□□□ -2.18
KDM1AO60341 MIR222-201ENST00000384992 110 ntBASIC1.45□□□□□ -2.18
KDM1AO60341 SNORD77B-201ENST00000391112 67 ntBASIC1.45□□□□□ -2.18
KDM1AO60341 RNU6-1165P-201ENST00000410119 107 ntBASIC1.45□□□□□ -2.18
KDM1AO60341 RNU6-237P-201ENST00000515985 71 ntBASIC1.45□□□□□ -2.18
KDM1AO60341 RNU7-6P-201ENST00000516845 62 ntBASIC1.45□□□□□ -2.18
KDM1AO60341 RNU6-1290P-201ENST00000362957 109 ntBASIC1.44□□□□□ -2.18
KDM1AO60341 SNORA25-201ENST00000384384 134 ntBASIC1.44□□□□□ -2.18
KDM1AO60341 MIR548D2-201ENST00000384955 97 ntBASIC1.44□□□□□ -2.18
KDM1AO60341 RNU6-1086P-201ENST00000410930 100 ntBASIC1.44□□□□□ -2.18
KDM1AO60341 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.44□□□□□ -2.18
KDM1AO60341 RNU7-90P-201ENST00000459216 62 ntBASIC1.44□□□□□ -2.18
KDM1AO60341 RNU1-92P-201ENST00000517017 135 ntBASIC1.44□□□□□ -2.18
KDM1AO60341 MIR4769-201ENST00000584126 77 ntBASIC1.44□□□□□ -2.18
KDM1AO60341 RNU1-42P-201ENST00000364033 160 ntBASIC1.43□□□□□ -2.18
KDM1AO60341 SNORD113.3-201ENST00000364630 78 ntBASIC1.43□□□□□ -2.18
KDM1AO60341 MIR548A1-201ENST00000385041 97 ntBASIC1.43□□□□□ -2.18
KDM1AO60341 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
KDM1AO60341 MIR1270-201ENST00000459320 83 ntBASIC1.43□□□□□ -2.18
KDM1AO60341 RNA5SP458-201ENST00000516188 119 ntBASIC1.43□□□□□ -2.18
KDM1AO60341 AC036111.3-201ENST00000526389 112 ntBASIC1.43□□□□□ -2.18
KDM1AO60341 AC141846.1-201ENST00000568348 142 ntBASIC1.43□□□□□ -2.18
KDM1AO60341 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.43□□□□□ -2.18
KDM1AO60341 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.43□□□□□ -2.18
KDM1AO60341 ZNF209P-201ENST00000593450 2304 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms