Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 Y_RNA.363-201ENST00000365529 113 ntBASIC1.07□□□□□ -2.24
PRKNO60260 Y_RNA.466-201ENST00000384294 113 ntBASIC1.07□□□□□ -2.24
PRKNO60260 RNU6-939P-201ENST00000384634 107 ntBASIC1.07□□□□□ -2.24
PRKNO60260 MIR548I2-201ENST00000408348 149 ntBASIC1.07□□□□□ -2.24
PRKNO60260 AC090844.1-201ENST00000422019 156 ntBASIC1.07□□□□□ -2.24
PRKNO60260 AC008267.6-201ENST00000441664 139 ntBASIC1.07□□□□□ -2.24
PRKNO60260 RNU6-1333P-201ENST00000516162 93 ntBASIC1.07□□□□□ -2.24
PRKNO60260 RNU6-479P-201ENST00000516348 105 ntBASIC1.07□□□□□ -2.24
PRKNO60260 AP003716.2-201ENST00000528260 108 ntBASIC1.07□□□□□ -2.24
PRKNO60260 AL078603.1-201ENST00000603824 313 ntBASIC1.07□□□□□ -2.24
PRKNO60260 PRELID3BP2-201ENST00000605362 201 ntBASIC1.07□□□□□ -2.24
PRKNO60260 AL020996.3-201ENST00000606617 222 ntBASIC1.07□□□□□ -2.24
PRKNO60260 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.07□□□□□ -2.24
PRKNO60260 Y_RNA.330-201ENST00000365230 109 ntBASIC1.06□□□□□ -2.24
PRKNO60260 RNU6-690P-201ENST00000365242 106 ntBASIC1.06□□□□□ -2.24
PRKNO60260 Y_RNA.366-201ENST00000365540 102 ntBASIC1.06□□□□□ -2.24
PRKNO60260 Y_RNA.525-201ENST00000384570 113 ntBASIC1.06□□□□□ -2.24
PRKNO60260 MIR222-201ENST00000384992 110 ntBASIC1.06□□□□□ -2.24
PRKNO60260 RNU6-1168P-201ENST00000390831 104 ntBASIC1.06□□□□□ -2.24
PRKNO60260 SNORA75.2-201ENST00000391138 150 ntBASIC1.06□□□□□ -2.24
PRKNO60260 SNORA75.3-201ENST00000391231 150 ntBASIC1.06□□□□□ -2.24
PRKNO60260 RNU2-51P-201ENST00000410708 197 ntBASIC1.06□□□□□ -2.24
PRKNO60260 Y_RNA.617-201ENST00000410920 90 ntBASIC1.06□□□□□ -2.24
PRKNO60260 RNU6-772P-201ENST00000516042 105 ntBASIC1.06□□□□□ -2.24
PRKNO60260 RNU6-240P-201ENST00000516098 97 ntBASIC1.06□□□□□ -2.24
PRKNO60260 RNU6-659P-201ENST00000516454 104 ntBASIC1.06□□□□□ -2.24
PRKNO60260 RNU6-62P-201ENST00000516526 102 ntBASIC1.06□□□□□ -2.24
PRKNO60260 IGKV1-22-201ENST00000524313 326 ntBASIC1.06□□□□□ -2.24
PRKNO60260 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
PRKNO60260 Y_RNA.261-201ENST00000364631 102 ntBASIC1.05□□□□□ -2.24
PRKNO60260 SNORA22C-201ENST00000384614 134 ntBASIC1.05□□□□□ -2.24
PRKNO60260 RNU6-1154P-201ENST00000391001 104 ntBASIC1.05□□□□□ -2.24
PRKNO60260 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.05□□□□□ -2.24
PRKNO60260 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.05□□□□□ -2.24
PRKNO60260 RNU6-313P-201ENST00000516317 112 ntBASIC1.05□□□□□ -2.24
PRKNO60260 RNU6-781P-201ENST00000516377 101 ntBASIC1.05□□□□□ -2.24
PRKNO60260 Y_RNA.712-201ENST00000517011 92 ntBASIC1.05□□□□□ -2.24
PRKNO60260 SNORA70.22-201ENST00000517160 124 ntBASIC1.05□□□□□ -2.24
PRKNO60260 MIR8055-201ENST00000610739 97 ntBASIC1.05□□□□□ -2.24
PRKNO60260 MIR6516-201ENST00000630554 81 ntBASIC1.05□□□□□ -2.24
PRKNO60260 Z97988.1-201ENST00000637697 135 ntBASIC1.05□□□□□ -2.24
PRKNO60260 RNU6-654P-201ENST00000364373 107 ntBASIC1.04□□□□□ -2.24
PRKNO60260 Y_RNA.291-201ENST00000364886 113 ntBASIC1.04□□□□□ -2.24
PRKNO60260 SNORD58C-201ENST00000365223 64 ntBASIC1.04□□□□□ -2.24
PRKNO60260 RNU6-396P-201ENST00000365369 105 ntBASIC1.04□□□□□ -2.24
PRKNO60260 RNU6-42P-201ENST00000384165 107 ntBASIC1.04□□□□□ -2.24
PRKNO60260 RNU6-1081P-201ENST00000384537 107 ntBASIC1.04□□□□□ -2.24
PRKNO60260 SNORA26.6-201ENST00000391256 115 ntBASIC1.04□□□□□ -2.24
PRKNO60260 RNA5SP95-201ENST00000410319 137 ntBASIC1.04□□□□□ -2.24
PRKNO60260 RN7SKP19-201ENST00000516016 252 ntBASIC1.04□□□□□ -2.24
PRKNO60260 RN7SKP179-201ENST00000516126 217 ntBASIC1.04□□□□□ -2.24
PRKNO60260 RNU6-1061P-201ENST00000516530 99 ntBASIC1.04□□□□□ -2.24
PRKNO60260 AC133485.4-201ENST00000561835 220 ntBASIC1.04□□□□□ -2.24
PRKNO60260 AC138907.4-201ENST00000570107 226 ntBASIC1.04□□□□□ -2.24
PRKNO60260 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.04□□□□□ -2.24
PRKNO60260 AL137067.1-201ENST00000615933 120 ntBASIC1.04□□□□□ -2.24
PRKNO60260 MIR6734-201ENST00000621166 68 ntBASIC1.04□□□□□ -2.24
PRKNO60260 MIR6717-201ENST00000622747 73 ntBASIC1.04□□□□□ -2.24
PRKNO60260 AC021613.1-201ENST00000623880 111 ntBASIC1.04□□□□□ -2.24
PRKNO60260 RNA5SP205-201ENST00000364653 136 ntBASIC1.03□□□□□ -2.24
PRKNO60260 SNORA25-201ENST00000384384 134 ntBASIC1.03□□□□□ -2.24
PRKNO60260 SNORA80D-201ENST00000384488 135 ntBASIC1.03□□□□□ -2.24
PRKNO60260 MIRLET7F2-201ENST00000385277 83 ntBASIC1.03□□□□□ -2.24
PRKNO60260 RNU6-1319P-201ENST00000390855 104 ntBASIC1.03□□□□□ -2.24
PRKNO60260 RNU6-747P-201ENST00000390928 104 ntBASIC1.03□□□□□ -2.24
PRKNO60260 RNU6-241P-201ENST00000391148 104 ntBASIC1.03□□□□□ -2.24
PRKNO60260 RNA5SP261-201ENST00000410536 106 ntBASIC1.03□□□□□ -2.24
PRKNO60260 RNU6-602P-201ENST00000411155 105 ntBASIC1.03□□□□□ -2.24
PRKNO60260 RNU6-177P-201ENST00000411257 104 ntBASIC1.03□□□□□ -2.24
PRKNO60260 RPS3AP1-201ENST00000413190 320 ntBASIC1.03□□□□□ -2.24
PRKNO60260 AL591704.2-201ENST00000421658 181 ntBASIC1.03□□□□□ -2.24
PRKNO60260 RNA5SP220-201ENST00000516298 104 ntBASIC1.03□□□□□ -2.24
PRKNO60260 MIR2115-201ENST00000516657 100 ntBASIC1.03□□□□□ -2.24
PRKNO60260 AC019288.1-201ENST00000557918 224 ntBASIC1.03□□□□□ -2.24
PRKNO60260 MIR3152-201ENST00000579801 74 ntBASIC1.03□□□□□ -2.24
PRKNO60260 AC021443.1-201ENST00000604478 211 ntBASIC1.03□□□□□ -2.24
PRKNO60260 SEPT14P17-201ENST00000617978 177 ntBASIC1.03□□□□□ -2.24
PRKNO60260 MIR3914-2-201ENST00000637339 95 ntBASIC1.03□□□□□ -2.24
PRKNO60260 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
PRKNO60260 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
PRKNO60260 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.02□□□□□ -2.25
PRKNO60260 MIR96-201ENST00000362288 78 ntBASIC1.02□□□□□ -2.25
PRKNO60260 SNORA25.8-201ENST00000364831 128 ntBASIC1.02□□□□□ -2.25
PRKNO60260 SNORD114-22-201ENST00000365423 72 ntBASIC1.02□□□□□ -2.25
PRKNO60260 SNORD38B-201ENST00000384690 67 ntBASIC1.02□□□□□ -2.25
PRKNO60260 RNU6-205P-201ENST00000390858 107 ntBASIC1.02□□□□□ -2.25
PRKNO60260 Y_RNA.630-201ENST00000411370 108 ntBASIC1.02□□□□□ -2.25
PRKNO60260 SNORD79.1-201ENST00000516069 84 ntBASIC1.02□□□□□ -2.25
PRKNO60260 RNY4P20-201ENST00000516678 93 ntBASIC1.02□□□□□ -2.25
PRKNO60260 RNU11-2P-201ENST00000516898 142 ntBASIC1.02□□□□□ -2.25
PRKNO60260 SNORD38B-202ENST00000625943 69 ntBASIC1.02□□□□□ -2.25
PRKNO60260 MIR6841-201ENST00000637129 72 ntBASIC1.02□□□□□ -2.25
PRKNO60260 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
PRKNO60260 AC008163.1-202ENST00000636004 2889 ntBASIC1.02□□□□□ -2.25
PRKNO60260 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
PRKNO60260 Y_RNA.563-201ENST00000384707 108 ntBASIC1.01□□□□□ -2.25
PRKNO60260 RNA5SP144-201ENST00000410846 116 ntBASIC1.01□□□□□ -2.25
PRKNO60260 RNU7-21P-201ENST00000459430 62 ntBASIC1.01□□□□□ -2.25
PRKNO60260 RNU2-35P-201ENST00000516446 142 ntBASIC1.01□□□□□ -2.25
PRKNO60260 AC023827.1-201ENST00000569247 97 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms