Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.83□□□□□ -2.7
SSSCA1O60232 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.83□□□□□ -2.7
SSSCA1O60232 MIR6773-201ENST00000612812 74 ntBASIC-1.83□□□□□ -2.7
SSSCA1O60232 MIR6888-201ENST00000621977 67 ntBASIC-1.83□□□□□ -2.7
SSSCA1O60232 RNU6-874P-201ENST00000362390 105 ntBASIC-1.84□□□□□ -2.7
SSSCA1O60232 RNA5SP405-201ENST00000363059 114 ntBASIC-1.84□□□□□ -2.7
SSSCA1O60232 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.84□□□□□ -2.7
SSSCA1O60232 SNORD116-9-201ENST00000384000 95 ntBASIC-1.84□□□□□ -2.7
SSSCA1O60232 SNORD116-3-201ENST00000384287 95 ntBASIC-1.84□□□□□ -2.7
SSSCA1O60232 SNORD116-8-201ENST00000384365 95 ntBASIC-1.84□□□□□ -2.7
SSSCA1O60232 SNORD116-7-201ENST00000384404 95 ntBASIC-1.84□□□□□ -2.7
SSSCA1O60232 SNORD116-5-201ENST00000384462 95 ntBASIC-1.84□□□□□ -2.7
SSSCA1O60232 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.84□□□□□ -2.7
SSSCA1O60232 MTATP6P13-201ENST00000438531 667 ntBASIC-1.84□□□□□ -2.7
SSSCA1O60232 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.84□□□□□ -2.7
SSSCA1O60232 RNU7-106P-201ENST00000459514 67 ntBASIC-1.84□□□□□ -2.7
SSSCA1O60232 RNU6-168P-201ENST00000516189 101 ntBASIC-1.84□□□□□ -2.7
SSSCA1O60232 RNU7-137P-201ENST00000516788 62 ntBASIC-1.84□□□□□ -2.7
SSSCA1O60232 AP001542.1-201ENST00000591314 200 ntBASIC-1.84□□□□□ -2.7
SSSCA1O60232 RN7SKP299-201ENST00000606679 301 ntBASIC-1.84□□□□□ -2.7
SSSCA1O60232 AC098479.1-201ENST00000609225 154 ntBASIC-1.84□□□□□ -2.7
SSSCA1O60232 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.85□□□□□ -2.71
SSSCA1O60232 RNU6-595P-201ENST00000363944 107 ntBASIC-1.85□□□□□ -2.71
SSSCA1O60232 MIRLET7B-201ENST00000385140 83 ntBASIC-1.85□□□□□ -2.71
SSSCA1O60232 MT-TM-201ENST00000387377 68 ntBASIC-1.85□□□□□ -2.71
SSSCA1O60232 SNORA36B-201ENST00000410438 131 ntBASIC-1.85□□□□□ -2.71
SSSCA1O60232 AL365203.2-201ENST00000423444 196 ntBASIC-1.85□□□□□ -2.71
SSSCA1O60232 AC073415.1-201ENST00000449240 153 ntBASIC-1.85□□□□□ -2.71
SSSCA1O60232 Y_RNA.665-201ENST00000516177 98 ntBASIC-1.85□□□□□ -2.71
SSSCA1O60232 SNORD67.1-201ENST00000516618 108 ntBASIC-1.85□□□□□ -2.71
SSSCA1O60232 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.85□□□□□ -2.71
SSSCA1O60232 MIR4500-201ENST00000579472 76 ntBASIC-1.85□□□□□ -2.71
SSSCA1O60232 AP000240.1-201ENST00000609910 452 ntBASIC-1.85□□□□□ -2.71
SSSCA1O60232 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.85□□□□□ -2.71
SSSCA1O60232 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.86□□□□□ -2.71
SSSCA1O60232 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.86□□□□□ -2.71
SSSCA1O60232 RNU6-181P-201ENST00000363225 107 ntBASIC-1.86□□□□□ -2.71
SSSCA1O60232 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.86□□□□□ -2.71
SSSCA1O60232 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.86□□□□□ -2.71
SSSCA1O60232 MIR517A-201ENST00000385001 87 ntBASIC-1.86□□□□□ -2.71
SSSCA1O60232 SNORD12B-201ENST00000410433 91 ntBASIC-1.86□□□□□ -2.71
SSSCA1O60232 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.86□□□□□ -2.71
SSSCA1O60232 RNU6-155P-201ENST00000516347 100 ntBASIC-1.86□□□□□ -2.71
SSSCA1O60232 RNU6-445P-201ENST00000516949 107 ntBASIC-1.86□□□□□ -2.71
SSSCA1O60232 AC124303.1-201ENST00000605703 360 ntBASIC-1.86□□□□□ -2.71
SSSCA1O60232 AL008718.3-201ENST00000610217 321 ntBASIC-1.86□□□□□ -2.71
SSSCA1O60232 RNU6-208P-201ENST00000362431 107 ntBASIC-1.87□□□□□ -2.71
SSSCA1O60232 RNU6-996P-201ENST00000365438 107 ntBASIC-1.87□□□□□ -2.71
SSSCA1O60232 SNORA62.4-201ENST00000365504 151 ntBASIC-1.87□□□□□ -2.71
SSSCA1O60232 RNU4-20P-201ENST00000365601 151 ntBASIC-1.87□□□□□ -2.71
SSSCA1O60232 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.87□□□□□ -2.71
SSSCA1O60232 AC092954.2-201ENST00000609103 430 ntBASIC-1.87□□□□□ -2.71
SSSCA1O60232 AC011476.5-201ENST00000615594 130 ntBASIC-1.87□□□□□ -2.71
SSSCA1O60232 AC091932.4-201ENST00000623386 200 ntBASIC-1.87□□□□□ -2.71
SSSCA1O60232 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.87□□□□□ -2.71
SSSCA1O60232 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.88□□□□□ -2.71
SSSCA1O60232 RNU6-95P-201ENST00000384697 107 ntBASIC-1.88□□□□□ -2.71
SSSCA1O60232 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-1.88□□□□□ -2.71
SSSCA1O60232 AC090616.4-201ENST00000448026 115 ntBASIC-1.88□□□□□ -2.71
SSSCA1O60232 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.88□□□□□ -2.71
SSSCA1O60232 RNU7-63P-201ENST00000459054 62 ntBASIC-1.88□□□□□ -2.71
SSSCA1O60232 SNORD2-201ENST00000459163 69 ntBASIC-1.88□□□□□ -2.71
SSSCA1O60232 RNU6-470P-201ENST00000515954 104 ntBASIC-1.88□□□□□ -2.71
SSSCA1O60232 RNU6-762P-201ENST00000517107 102 ntBASIC-1.88□□□□□ -2.71
SSSCA1O60232 AC024909.2-201ENST00000553035 286 ntBASIC-1.88□□□□□ -2.71
SSSCA1O60232 MIR548AB-201ENST00000584917 84 ntBASIC-1.88□□□□□ -2.71
SSSCA1O60232 AL080274.1-201ENST00000605565 220 ntBASIC-1.88□□□□□ -2.71
SSSCA1O60232 RNU6-500P-201ENST00000362349 107 ntBASIC-1.89□□□□□ -2.71
SSSCA1O60232 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.89□□□□□ -2.71
SSSCA1O60232 RNU6-553P-201ENST00000364047 96 ntBASIC-1.89□□□□□ -2.71
SSSCA1O60232 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.89□□□□□ -2.71
SSSCA1O60232 SNORA53-201ENST00000391141 249 ntBASIC-1.89□□□□□ -2.71
SSSCA1O60232 AC098826.2-201ENST00000452011 651 ntBASIC-1.89□□□□□ -2.71
SSSCA1O60232 RNU7-87P-201ENST00000459343 62 ntBASIC-1.89□□□□□ -2.71
SSSCA1O60232 AC091951.2-201ENST00000500762 203 ntBASIC-1.89□□□□□ -2.71
SSSCA1O60232 AP002795.1-201ENST00000534879 84 ntBASIC-1.89□□□□□ -2.71
SSSCA1O60232 AC145350.1-201ENST00000567426 208 ntBASIC-1.89□□□□□ -2.71
SSSCA1O60232 AC005357.1-201ENST00000588399 301 ntBASIC-1.89□□□□□ -2.71
SSSCA1O60232 AC021613.1-201ENST00000623880 111 ntBASIC-1.89□□□□□ -2.71
SSSCA1O60232 RNA5SP93-201ENST00000362525 114 ntBASIC-1.9□□□□□ -2.71
SSSCA1O60232 RNU6-1120P-201ENST00000362988 108 ntBASIC-1.9□□□□□ -2.71
SSSCA1O60232 RNU6-888P-201ENST00000363010 101 ntBASIC-1.9□□□□□ -2.71
SSSCA1O60232 RNU6-522P-201ENST00000364497 107 ntBASIC-1.9□□□□□ -2.71
SSSCA1O60232 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.9□□□□□ -2.71
SSSCA1O60232 SNORA20-201ENST00000384662 132 ntBASIC-1.9□□□□□ -2.71
SSSCA1O60232 RNU6-400P-201ENST00000391173 106 ntBASIC-1.9□□□□□ -2.71
SSSCA1O60232 MIR190B-201ENST00000401119 79 ntBASIC-1.9□□□□□ -2.71
SSSCA1O60232 BX295541.1-201ENST00000417774 250 ntBASIC-1.9□□□□□ -2.71
SSSCA1O60232 SNORD54-201ENST00000459159 67 ntBASIC-1.9□□□□□ -2.71
SSSCA1O60232 SEPT14P4-201ENST00000513445 186 ntBASIC-1.9□□□□□ -2.71
SSSCA1O60232 Y_RNA.72-201ENST00000362894 103 ntBASIC-1.91□□□□□ -2.72
SSSCA1O60232 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.91□□□□□ -2.72
SSSCA1O60232 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.91□□□□□ -2.72
SSSCA1O60232 Y_RNA.529-201ENST00000384586 119 ntBASIC-1.91□□□□□ -2.72
SSSCA1O60232 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.91□□□□□ -2.72
SSSCA1O60232 RNU7-141P-201ENST00000459304 62 ntBASIC-1.91□□□□□ -2.72
SSSCA1O60232 MTATP6P24-201ENST00000576835 677 ntBASIC-1.91□□□□□ -2.72
SSSCA1O60232 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.91□□□□□ -2.72
SSSCA1O60232 AC024933.1-201ENST00000608472 348 ntBASIC-1.91□□□□□ -2.72
SSSCA1O60232 AL021707.8-201ENST00000609428 183 ntBASIC-1.91□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms