Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 SNORD33-201ENST00000362761 85 ntBASIC1.6□□□□□ -2.15
PROM1O43490 SNORA63.5-201ENST00000363548 123 ntBASIC1.6□□□□□ -2.15
PROM1O43490 Y_RNA.549-201ENST00000384657 102 ntBASIC1.6□□□□□ -2.15
PROM1O43490 SNORD12C-201ENST00000386307 89 ntBASIC1.6□□□□□ -2.15
PROM1O43490 AC063976.4-201ENST00000421971 163 ntBASIC1.6□□□□□ -2.15
PROM1O43490 RNU7-6P-201ENST00000516845 62 ntBASIC1.6□□□□□ -2.15
PROM1O43490 AC019176.1-201ENST00000518519 225 ntBASIC1.6□□□□□ -2.15
PROM1O43490 AL513534.2-201ENST00000603836 250 ntBASIC1.6□□□□□ -2.15
PROM1O43490 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.6□□□□□ -2.15
PROM1O43490 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
PROM1O43490 Y_RNA.531-201ENST00000384589 121 ntBASIC1.59□□□□□ -2.15
PROM1O43490 SNORA26.6-201ENST00000391256 115 ntBASIC1.59□□□□□ -2.15
PROM1O43490 RPS3AP1-201ENST00000413190 320 ntBASIC1.59□□□□□ -2.15
PROM1O43490 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.59□□□□□ -2.15
PROM1O43490 AL357312.1-201ENST00000603879 298 ntBASIC1.59□□□□□ -2.15
PROM1O43490 MIR502-201ENST00000606349 86 ntBASIC1.59□□□□□ -2.15
PROM1O43490 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.59□□□□□ -2.15
PROM1O43490 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.59□□□□□ -2.15
PROM1O43490 AL589743.1-201ENST00000551932 2712 ntBASIC1.59□□□□□ -2.16
PROM1O43490 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
PROM1O43490 RNU6-153P-201ENST00000364422 104 ntBASIC1.58□□□□□ -2.16
PROM1O43490 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.58□□□□□ -2.16
PROM1O43490 SNORA67.5-201ENST00000391036 107 ntBASIC1.58□□□□□ -2.16
PROM1O43490 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.58□□□□□ -2.16
PROM1O43490 RNA5SP33-201ENST00000516687 98 ntBASIC1.58□□□□□ -2.16
PROM1O43490 RNU6-1258P-201ENST00000516911 111 ntBASIC1.58□□□□□ -2.16
PROM1O43490 CYP3A52P-201ENST00000563326 91 ntBASIC1.58□□□□□ -2.16
PROM1O43490 MIR548AO-201ENST00000579992 96 ntBASIC1.58□□□□□ -2.16
PROM1O43490 GHRLOS.1-201ENST00000610995 70 ntBASIC1.58□□□□□ -2.16
PROM1O43490 AL035470.1-201ENST00000622571 220 ntBASIC1.58□□□□□ -2.16
PROM1O43490 RNU6-1107P-201ENST00000364817 104 ntBASIC1.57□□□□□ -2.16
PROM1O43490 Y_RNA.362-201ENST00000365518 110 ntBASIC1.57□□□□□ -2.16
PROM1O43490 MIR489-201ENST00000384923 84 ntBASIC1.57□□□□□ -2.16
PROM1O43490 MIR548D2-201ENST00000384955 97 ntBASIC1.57□□□□□ -2.16
PROM1O43490 RPS23P4-201ENST00000487908 423 ntBASIC1.57□□□□□ -2.16
PROM1O43490 RNU6-902P-201ENST00000517212 91 ntBASIC1.57□□□□□ -2.16
PROM1O43490 MIR4303-201ENST00000581299 66 ntBASIC1.57□□□□□ -2.16
PROM1O43490 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
PROM1O43490 MIR6841-201ENST00000637129 72 ntBASIC1.57□□□□□ -2.16
PROM1O43490 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
PROM1O43490 MIR302D-201ENST00000362275 68 ntBASIC1.56□□□□□ -2.16
PROM1O43490 RNA5SP48-201ENST00000363969 126 ntBASIC1.56□□□□□ -2.16
PROM1O43490 RNA5SP363-201ENST00000365072 115 ntBASIC1.56□□□□□ -2.16
PROM1O43490 Y_RNA.470-201ENST00000384307 117 ntBASIC1.56□□□□□ -2.16
PROM1O43490 AC009474.2-201ENST00000451383 136 ntBASIC1.56□□□□□ -2.16
PROM1O43490 RPL39P39-201ENST00000455840 151 ntBASIC1.56□□□□□ -2.16
PROM1O43490 AC113410.1-201ENST00000505029 247 ntBASIC1.56□□□□□ -2.16
PROM1O43490 AC079140.2-201ENST00000506193 142 ntBASIC1.56□□□□□ -2.16
PROM1O43490 MIR3937-201ENST00000580135 106 ntBASIC1.56□□□□□ -2.16
PROM1O43490 MIR3192-201ENST00000584920 77 ntBASIC1.56□□□□□ -2.16
PROM1O43490 MIR8055-201ENST00000610739 97 ntBASIC1.56□□□□□ -2.16
PROM1O43490 AL161722.3-201ENST00000605789 2983 ntBASIC1.55□□□□□ -2.16
PROM1O43490 Y_RNA.85-201ENST00000363014 111 ntBASIC1.55□□□□□ -2.16
PROM1O43490 Y_RNA.281-201ENST00000364774 94 ntBASIC1.55□□□□□ -2.16
PROM1O43490 Y_RNA.299-201ENST00000364973 94 ntBASIC1.55□□□□□ -2.16
PROM1O43490 SNORA32-201ENST00000384072 121 ntBASIC1.55□□□□□ -2.16
PROM1O43490 Y_RNA.430-201ENST00000384081 110 ntBASIC1.55□□□□□ -2.16
PROM1O43490 RNU6-997P-201ENST00000384725 107 ntBASIC1.55□□□□□ -2.16
PROM1O43490 MIR7-2-201ENST00000384970 110 ntBASIC1.55□□□□□ -2.16
PROM1O43490 AC245047.7-201ENST00000440265 293 ntBASIC1.55□□□□□ -2.16
PROM1O43490 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.55□□□□□ -2.16
PROM1O43490 BX248123.2-201ENST00000606318 124 ntBASIC1.55□□□□□ -2.16
PROM1O43490 AL096861.1-201ENST00000610899 123 ntBASIC1.55□□□□□ -2.16
PROM1O43490 uc_338.28-201ENST00000612082 187 ntBASIC1.55□□□□□ -2.16
PROM1O43490 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.55□□□□□ -2.16
PROM1O43490 Y_RNA.49-201ENST00000362714 112 ntBASIC1.54□□□□□ -2.16
PROM1O43490 SNORA25.3-201ENST00000363205 127 ntBASIC1.54□□□□□ -2.16
PROM1O43490 SNORD1A-201ENST00000364968 72 ntBASIC1.54□□□□□ -2.16
PROM1O43490 Y_RNA.344-201ENST00000365381 112 ntBASIC1.54□□□□□ -2.16
PROM1O43490 RNU6-1065P-201ENST00000384513 106 ntBASIC1.54□□□□□ -2.16
PROM1O43490 RNU4-69P-201ENST00000410677 143 ntBASIC1.54□□□□□ -2.16
PROM1O43490 MIR4679-2-201ENST00000578358 77 ntBASIC1.54□□□□□ -2.16
PROM1O43490 MIR548AE2-201ENST00000583456 67 ntBASIC1.54□□□□□ -2.16
PROM1O43490 Z97988.1-201ENST00000637697 135 ntBASIC1.54□□□□□ -2.16
PROM1O43490 RNU6-755P-201ENST00000364400 103 ntBASIC1.53□□□□□ -2.16
PROM1O43490 Y_RNA.354-201ENST00000365448 111 ntBASIC1.53□□□□□ -2.16
PROM1O43490 SNORD38B-201ENST00000384690 67 ntBASIC1.53□□□□□ -2.16
PROM1O43490 SNORD77B-201ENST00000391112 67 ntBASIC1.53□□□□□ -2.16
PROM1O43490 RNU6-602P-201ENST00000411155 105 ntBASIC1.53□□□□□ -2.16
PROM1O43490 AC090844.1-201ENST00000422019 156 ntBASIC1.53□□□□□ -2.16
PROM1O43490 AL031737.1-201ENST00000450125 223 ntBASIC1.53□□□□□ -2.16
PROM1O43490 RPL39P34-201ENST00000477141 156 ntBASIC1.53□□□□□ -2.16
PROM1O43490 AL512598.1-201ENST00000610158 273 ntBASIC1.53□□□□□ -2.16
PROM1O43490 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
PROM1O43490 SNORD38B-202ENST00000625943 69 ntBASIC1.53□□□□□ -2.16
PROM1O43490 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
PROM1O43490 MIR450A1-201ENST00000362262 91 ntBASIC1.52□□□□□ -2.17
PROM1O43490 RPL39P25-201ENST00000449384 154 ntBASIC1.52□□□□□ -2.17
PROM1O43490 RNU7-95P-201ENST00000459222 64 ntBASIC1.52□□□□□ -2.17
PROM1O43490 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
PROM1O43490 SNORD115-2-201ENST00000362842 82 ntBASIC1.51□□□□□ -2.17
PROM1O43490 Y_RNA.224-201ENST00000364308 111 ntBASIC1.51□□□□□ -2.17
PROM1O43490 SNORD115-20-201ENST00000365099 82 ntBASIC1.51□□□□□ -2.17
PROM1O43490 RNU6-1237P-201ENST00000384777 107 ntBASIC1.51□□□□□ -2.17
PROM1O43490 AC027119.1-201ENST00000440877 241 ntBASIC1.51□□□□□ -2.17
PROM1O43490 AC068339.1-201ENST00000526965 141 ntBASIC1.51□□□□□ -2.17
PROM1O43490 AC087741.2-201ENST00000619415 172 ntBASIC1.51□□□□□ -2.17
PROM1O43490 MIR8065-201ENST00000620577 100 ntBASIC1.51□□□□□ -2.17
PROM1O43490 U8.6-201ENST00000364939 135 ntBASIC1.5□□□□□ -2.17
PROM1O43490 Y_RNA.309-201ENST00000365046 111 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms