Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 RNY4P28-201ENST00000365281 93 ntBASIC0.34□□□□□ -2.36
MSH4O15457 RNU6-1336P-201ENST00000383886 109 ntBASIC0.34□□□□□ -2.36
MSH4O15457 Y_RNA.539-201ENST00000384635 107 ntBASIC0.34□□□□□ -2.36
MSH4O15457 MIR125B2-201ENST00000385128 89 ntBASIC0.34□□□□□ -2.36
MSH4O15457 RNU6-679P-201ENST00000391003 106 ntBASIC0.34□□□□□ -2.36
MSH4O15457 MIR938-201ENST00000401216 83 ntBASIC0.34□□□□□ -2.36
MSH4O15457 Y_RNA.618-201ENST00000410949 107 ntBASIC0.34□□□□□ -2.36
MSH4O15457 RNU7-102P-201ENST00000458948 62 ntBASIC0.34□□□□□ -2.36
MSH4O15457 RNA5SP330-201ENST00000517096 96 ntBASIC0.34□□□□□ -2.36
MSH4O15457 RNU7-156P-201ENST00000517214 74 ntBASIC0.34□□□□□ -2.36
MSH4O15457 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.34□□□□□ -2.36
MSH4O15457 MIR5197-201ENST00000583721 112 ntBASIC0.34□□□□□ -2.36
MSH4O15457 MIR924-201ENST00000638017 53 ntBASIC0.34□□□□□ -2.36
MSH4O15457 MIR330-201ENST00000362196 94 ntBASIC0.33□□□□□ -2.36
MSH4O15457 MIR30D-201ENST00000362283 70 ntBASIC0.33□□□□□ -2.36
MSH4O15457 Y_RNA.133-201ENST00000363428 110 ntBASIC0.33□□□□□ -2.36
MSH4O15457 RNU6-578P-201ENST00000390980 103 ntBASIC0.33□□□□□ -2.36
MSH4O15457 MIR1257-201ENST00000408490 117 ntBASIC0.33□□□□□ -2.36
MSH4O15457 MIR18B-201ENST00000454574 71 ntBASIC0.33□□□□□ -2.36
MSH4O15457 Y_RNA.797-201ENST00000515977 94 ntBASIC0.33□□□□□ -2.36
MSH4O15457 SCARNA15.1-201ENST00000516384 125 ntBASIC0.33□□□□□ -2.36
MSH4O15457 Y_RNA.680-201ENST00000516441 93 ntBASIC0.33□□□□□ -2.36
MSH4O15457 MIR4308-201ENST00000580634 81 ntBASIC0.33□□□□□ -2.36
MSH4O15457 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.33□□□□□ -2.36
MSH4O15457 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.33□□□□□ -2.36
MSH4O15457 MIRLET7D-201ENST00000362263 87 ntBASIC0.32□□□□□ -2.36
MSH4O15457 RNU6-103P-201ENST00000363686 107 ntBASIC0.32□□□□□ -2.36
MSH4O15457 Y_RNA.182-201ENST00000363880 111 ntBASIC0.32□□□□□ -2.36
MSH4O15457 RNU4-16P-201ENST00000364737 141 ntBASIC0.32□□□□□ -2.36
MSH4O15457 RNU6-574P-201ENST00000384265 107 ntBASIC0.32□□□□□ -2.36
MSH4O15457 Y_RNA.542-201ENST00000384641 111 ntBASIC0.32□□□□□ -2.36
MSH4O15457 MIR563-201ENST00000385080 79 ntBASIC0.32□□□□□ -2.36
MSH4O15457 RNU6-1319P-201ENST00000390855 104 ntBASIC0.32□□□□□ -2.36
MSH4O15457 RNU6-747P-201ENST00000390928 104 ntBASIC0.32□□□□□ -2.36
MSH4O15457 RNU6-241P-201ENST00000391148 104 ntBASIC0.32□□□□□ -2.36
MSH4O15457 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.32□□□□□ -2.36
MSH4O15457 MIR548H3-201ENST00000408771 118 ntBASIC0.32□□□□□ -2.36
MSH4O15457 SNORD93-201ENST00000408813 74 ntBASIC0.32□□□□□ -2.36
MSH4O15457 RNU6-447P-201ENST00000410293 104 ntBASIC0.32□□□□□ -2.36
MSH4O15457 RNU6-1118P-201ENST00000410382 104 ntBASIC0.32□□□□□ -2.36
MSH4O15457 RNU6-1076P-201ENST00000410397 104 ntBASIC0.32□□□□□ -2.36
MSH4O15457 RNU6-355P-201ENST00000410427 104 ntBASIC0.32□□□□□ -2.36
MSH4O15457 RNU6-791P-201ENST00000410467 104 ntBASIC0.32□□□□□ -2.36
MSH4O15457 RNU6-705P-201ENST00000410601 104 ntBASIC0.32□□□□□ -2.36
MSH4O15457 RNU6-1100P-201ENST00000410691 104 ntBASIC0.32□□□□□ -2.36
MSH4O15457 RNU6-860P-201ENST00000410860 104 ntBASIC0.32□□□□□ -2.36
MSH4O15457 RNU6-1217P-201ENST00000411276 104 ntBASIC0.32□□□□□ -2.36
MSH4O15457 Y_RNA.626-201ENST00000411288 95 ntBASIC0.32□□□□□ -2.36
MSH4O15457 RNU6-785P-201ENST00000411324 104 ntBASIC0.32□□□□□ -2.36
MSH4O15457 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.32□□□□□ -2.36
MSH4O15457 MTCYBP9-201ENST00000431021 303 ntBASIC0.32□□□□□ -2.36
MSH4O15457 AL118496.2-201ENST00000448300 230 ntBASIC0.32□□□□□ -2.36
MSH4O15457 RNU7-80P-201ENST00000459562 61 ntBASIC0.32□□□□□ -2.36
MSH4O15457 SNORA62.5-201ENST00000516634 120 ntBASIC0.32□□□□□ -2.36
MSH4O15457 MIR378D2-201ENST00000580636 98 ntBASIC0.32□□□□□ -2.36
MSH4O15457 MIR3128-201ENST00000581957 66 ntBASIC0.32□□□□□ -2.36
MSH4O15457 U6.90-201ENST00000614007 104 ntBASIC0.32□□□□□ -2.36
MSH4O15457 U6.70-201ENST00000620287 104 ntBASIC0.32□□□□□ -2.36
MSH4O15457 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
MSH4O15457 AC090625.1-201ENST00000357130 210 ntBASIC0.31□□□□□ -2.36
MSH4O15457 Y_RNA.162-201ENST00000363683 102 ntBASIC0.31□□□□□ -2.36
MSH4O15457 RNU6-978P-201ENST00000364371 103 ntBASIC0.31□□□□□ -2.36
MSH4O15457 Y_RNA.562-201ENST00000384695 113 ntBASIC0.31□□□□□ -2.36
MSH4O15457 Y_RNA.571-201ENST00000384753 98 ntBASIC0.31□□□□□ -2.36
MSH4O15457 RNU4-43P-201ENST00000410628 137 ntBASIC0.31□□□□□ -2.36
MSH4O15457 Y_RNA.617-201ENST00000410920 90 ntBASIC0.31□□□□□ -2.36
MSH4O15457 SNORD116-25-201ENST00000516517 92 ntBASIC0.31□□□□□ -2.36
MSH4O15457 RNU7-70P-201ENST00000516941 66 ntBASIC0.31□□□□□ -2.36
MSH4O15457 AL365205.2-201ENST00000594586 68 ntBASIC0.31□□□□□ -2.36
MSH4O15457 MIR8087-201ENST00000612745 78 ntBASIC0.31□□□□□ -2.36
MSH4O15457 AC092634.7-201ENST00000621022 103 ntBASIC0.31□□□□□ -2.36
MSH4O15457 Y_RNA.60-201ENST00000362831 98 ntBASIC0.3□□□□□ -2.36
MSH4O15457 RNU6-1292P-201ENST00000383856 107 ntBASIC0.3□□□□□ -2.36
MSH4O15457 RNA5SP237-201ENST00000410414 113 ntBASIC0.3□□□□□ -2.36
MSH4O15457 RPL39P25-201ENST00000449384 154 ntBASIC0.3□□□□□ -2.36
MSH4O15457 RNU6-1149P-201ENST00000516810 97 ntBASIC0.3□□□□□ -2.36
MSH4O15457 AC090897.1-201ENST00000580909 226 ntBASIC0.3□□□□□ -2.36
MSH4O15457 MIR4514-201ENST00000581410 57 ntBASIC0.3□□□□□ -2.36
MSH4O15457 SNORD92-201ENST00000585078 85 ntBASIC0.3□□□□□ -2.36
MSH4O15457 MTND5P32-201ENST00000560711 1802 ntBASIC0.29□□□□□ -2.36
MSH4O15457 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.29□□□□□ -2.36
MSH4O15457 RNU6-403P-201ENST00000363163 104 ntBASIC0.29□□□□□ -2.36
MSH4O15457 Y_RNA.350-201ENST00000365409 98 ntBASIC0.29□□□□□ -2.36
MSH4O15457 Y_RNA.454-201ENST00000384224 113 ntBASIC0.29□□□□□ -2.36
MSH4O15457 RNU4-70P-201ENST00000384579 139 ntBASIC0.29□□□□□ -2.36
MSH4O15457 U8.15-201ENST00000390947 134 ntBASIC0.29□□□□□ -2.36
MSH4O15457 MIR1302-3-201ENST00000408128 138 ntBASIC0.29□□□□□ -2.36
MSH4O15457 RNU4-83P-201ENST00000410863 133 ntBASIC0.29□□□□□ -2.36
MSH4O15457 AC002350.1-201ENST00000490759 375 ntBASIC0.29□□□□□ -2.36
MSH4O15457 Y_RNA.668-201ENST00000516233 93 ntBASIC0.29□□□□□ -2.36
MSH4O15457 SCARNA15-202ENST00000516881 127 ntBASIC0.29□□□□□ -2.36
MSH4O15457 RNU6-111P-201ENST00000517179 105 ntBASIC0.29□□□□□ -2.36
MSH4O15457 MIR3152-201ENST00000579801 74 ntBASIC0.29□□□□□ -2.36
MSH4O15457 AC062037.2-201ENST00000610137 73 ntBASIC0.29□□□□□ -2.36
MSH4O15457 AL662814.1-201ENST00000617364 121 ntBASIC0.29□□□□□ -2.36
MSH4O15457 AC021613.1-201ENST00000623880 111 ntBASIC0.29□□□□□ -2.36
MSH4O15457 U6.106-201ENST00000636360 105 ntBASIC0.29□□□□□ -2.36
MSH4O15457 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
MSH4O15457 SNORA22.1-201ENST00000362701 134 ntBASIC0.28□□□□□ -2.36
MSH4O15457 RNU6-643P-201ENST00000384018 107 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 207 ms