Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 MIR548AO-201ENST00000579992 96 ntBASIC0.86□□□□□ -2.27
CDX4O14627 HSPE1P19-201ENST00000603327 295 ntBASIC0.86□□□□□ -2.27
CDX4O14627 AC091932.4-201ENST00000623386 200 ntBASIC0.86□□□□□ -2.27
CDX4O14627 Y_RNA.178-201ENST00000363832 102 ntBASIC0.85□□□□□ -2.27
CDX4O14627 RNU1-124P-201ENST00000363861 145 ntBASIC0.85□□□□□ -2.27
CDX4O14627 RNU6-309P-201ENST00000364573 106 ntBASIC0.85□□□□□ -2.27
CDX4O14627 SNORA22-201ENST00000383907 134 ntBASIC0.85□□□□□ -2.27
CDX4O14627 Y_RNA.420-201ENST00000384043 110 ntBASIC0.85□□□□□ -2.27
CDX4O14627 SNORA24-201ENST00000384096 131 ntBASIC0.85□□□□□ -2.27
CDX4O14627 RNU6-746P-201ENST00000384112 109 ntBASIC0.85□□□□□ -2.27
CDX4O14627 SNORA22C-201ENST00000384614 134 ntBASIC0.85□□□□□ -2.27
CDX4O14627 MIR936-201ENST00000401264 98 ntBASIC0.85□□□□□ -2.27
CDX4O14627 RNU6-1190P-201ENST00000410811 104 ntBASIC0.85□□□□□ -2.27
CDX4O14627 MRPL35P3-201ENST00000421557 364 ntBASIC0.85□□□□□ -2.27
CDX4O14627 AC063976.4-201ENST00000421971 163 ntBASIC0.85□□□□□ -2.27
CDX4O14627 AC004941.2-201ENST00000427009 228 ntBASIC0.85□□□□□ -2.27
CDX4O14627 AL035398.1-201ENST00000430869 322 ntBASIC0.85□□□□□ -2.27
CDX4O14627 HMGN1P33-201ENST00000432945 451 ntBASIC0.85□□□□□ -2.27
CDX4O14627 RNU7-96P-201ENST00000459535 64 ntBASIC0.85□□□□□ -2.27
CDX4O14627 RNU7-80P-201ENST00000459562 61 ntBASIC0.85□□□□□ -2.27
CDX4O14627 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.85□□□□□ -2.27
CDX4O14627 RNA5SP236-201ENST00000516169 116 ntBASIC0.85□□□□□ -2.27
CDX4O14627 Y_RNA.703-201ENST00000516846 111 ntBASIC0.85□□□□□ -2.27
CDX4O14627 RNU7-70P-201ENST00000516941 66 ntBASIC0.85□□□□□ -2.27
CDX4O14627 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.85□□□□□ -2.27
CDX4O14627 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
CDX4O14627 MIR302B-201ENST00000362188 73 ntBASIC0.84□□□□□ -2.27
CDX4O14627 RNU6-915P-201ENST00000364943 103 ntBASIC0.84□□□□□ -2.27
CDX4O14627 SNORD18B-201ENST00000365659 72 ntBASIC0.84□□□□□ -2.27
CDX4O14627 AC090844.1-201ENST00000422019 156 ntBASIC0.84□□□□□ -2.27
CDX4O14627 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.84□□□□□ -2.27
CDX4O14627 RNU5E-3P-201ENST00000515913 68 ntBASIC0.84□□□□□ -2.27
CDX4O14627 SNORD79.1-201ENST00000516069 84 ntBASIC0.84□□□□□ -2.27
CDX4O14627 Y_RNA.690-201ENST00000516603 95 ntBASIC0.84□□□□□ -2.27
CDX4O14627 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.84□□□□□ -2.27
CDX4O14627 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.84□□□□□ -2.27
CDX4O14627 Y_RNA.120-201ENST00000363304 110 ntBASIC0.83□□□□□ -2.28
CDX4O14627 Y_RNA.294-201ENST00000364916 102 ntBASIC0.83□□□□□ -2.28
CDX4O14627 Y_RNA.343-201ENST00000365354 112 ntBASIC0.83□□□□□ -2.28
CDX4O14627 Y_RNA.454-201ENST00000384224 113 ntBASIC0.83□□□□□ -2.28
CDX4O14627 Y_RNA.568-201ENST00000384742 113 ntBASIC0.83□□□□□ -2.28
CDX4O14627 MIR19B1-201ENST00000384829 87 ntBASIC0.83□□□□□ -2.28
CDX4O14627 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.83□□□□□ -2.28
CDX4O14627 MIR1302-7-201ENST00000408841 72 ntBASIC0.83□□□□□ -2.28
CDX4O14627 RNU7-73P-201ENST00000458743 63 ntBASIC0.83□□□□□ -2.28
CDX4O14627 RNU7-90P-201ENST00000459216 62 ntBASIC0.83□□□□□ -2.28
CDX4O14627 snoU13.16-201ENST00000459350 104 ntBASIC0.83□□□□□ -2.28
CDX4O14627 Y_RNA.651-201ENST00000459380 103 ntBASIC0.83□□□□□ -2.28
CDX4O14627 RNU7-53P-201ENST00000516705 60 ntBASIC0.83□□□□□ -2.28
CDX4O14627 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.83□□□□□ -2.28
CDX4O14627 FAM71BP1-201ENST00000604431 523 ntBASIC0.83□□□□□ -2.28
CDX4O14627 PRELID3BP2-201ENST00000605362 201 ntBASIC0.83□□□□□ -2.28
CDX4O14627 AC012676.2-201ENST00000619258 186 ntBASIC0.83□□□□□ -2.28
CDX4O14627 AC010332.2-201ENST00000613083 1904 ntBASIC0.83□□□□□ -2.28
CDX4O14627 RNA5SP264-201ENST00000363115 107 ntBASIC0.82□□□□□ -2.28
CDX4O14627 Y_RNA.115-201ENST00000363272 98 ntBASIC0.82□□□□□ -2.28
CDX4O14627 RNU4-16P-201ENST00000364737 141 ntBASIC0.82□□□□□ -2.28
CDX4O14627 Y_RNA.363-201ENST00000365529 113 ntBASIC0.82□□□□□ -2.28
CDX4O14627 MIR200A-201ENST00000384875 90 ntBASIC0.82□□□□□ -2.28
CDX4O14627 MIR1185-1-201ENST00000408598 86 ntBASIC0.82□□□□□ -2.28
CDX4O14627 RNU6-257P-201ENST00000410238 98 ntBASIC0.82□□□□□ -2.28
CDX4O14627 MTND4LP9-201ENST00000427694 174 ntBASIC0.82□□□□□ -2.28
CDX4O14627 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.82□□□□□ -2.28
CDX4O14627 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.82□□□□□ -2.28
CDX4O14627 AP003716.2-201ENST00000528260 108 ntBASIC0.82□□□□□ -2.28
CDX4O14627 AP001328.1-201ENST00000528550 176 ntBASIC0.82□□□□□ -2.28
CDX4O14627 MIR8055-201ENST00000610739 97 ntBASIC0.82□□□□□ -2.28
CDX4O14627 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CDX4O14627 MIR103A2-201ENST00000362154 78 ntBASIC0.81□□□□□ -2.28
CDX4O14627 RNU6-349P-201ENST00000362402 107 ntBASIC0.81□□□□□ -2.28
CDX4O14627 SNORD114-23-201ENST00000363536 72 ntBASIC0.81□□□□□ -2.28
CDX4O14627 SNORA26.6-201ENST00000391256 115 ntBASIC0.81□□□□□ -2.28
CDX4O14627 AL603914.1-201ENST00000401964 204 ntBASIC0.81□□□□□ -2.28
CDX4O14627 MTATP6P21-201ENST00000440681 189 ntBASIC0.81□□□□□ -2.28
CDX4O14627 RNU6-240P-201ENST00000516098 97 ntBASIC0.81□□□□□ -2.28
CDX4O14627 RNA5SP330-201ENST00000517096 96 ntBASIC0.81□□□□□ -2.28
CDX4O14627 AC133485.1-201ENST00000567176 124 ntBASIC0.81□□□□□ -2.28
CDX4O14627 AC138907.6-201ENST00000568401 126 ntBASIC0.81□□□□□ -2.28
CDX4O14627 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.81□□□□□ -2.28
CDX4O14627 MIR3121-201ENST00000579680 77 ntBASIC0.81□□□□□ -2.28
CDX4O14627 MIR6717-201ENST00000622747 73 ntBASIC0.81□□□□□ -2.28
CDX4O14627 AP001340.1-201ENST00000624405 217 ntBASIC0.81□□□□□ -2.28
CDX4O14627 AC010487.4-201ENST00000637027 61 ntBASIC0.81□□□□□ -2.28
CDX4O14627 RNU6-654P-201ENST00000364373 107 ntBASIC0.8□□□□□ -2.28
CDX4O14627 Y_RNA.258-201ENST00000364613 105 ntBASIC0.8□□□□□ -2.28
CDX4O14627 SNORD114-24-201ENST00000365029 72 ntBASIC0.8□□□□□ -2.28
CDX4O14627 RNY1P6-201ENST00000384193 109 ntBASIC0.8□□□□□ -2.28
CDX4O14627 AL603908.1-201ENST00000406098 201 ntBASIC0.8□□□□□ -2.28
CDX4O14627 AC002429.1-201ENST00000437672 148 ntBASIC0.8□□□□□ -2.28
CDX4O14627 AL392103.1-201ENST00000447000 198 ntBASIC0.8□□□□□ -2.28
CDX4O14627 RNU7-21P-201ENST00000459430 62 ntBASIC0.8□□□□□ -2.28
CDX4O14627 UBL5P1-201ENST00000507979 193 ntBASIC0.8□□□□□ -2.28
CDX4O14627 Y_RNA.681-201ENST00000516445 113 ntBASIC0.8□□□□□ -2.28
CDX4O14627 Y_RNA.692-201ENST00000516627 105 ntBASIC0.8□□□□□ -2.28
CDX4O14627 RNU11-2P-201ENST00000516898 142 ntBASIC0.8□□□□□ -2.28
CDX4O14627 AC108081.1-201ENST00000604358 221 ntBASIC0.8□□□□□ -2.28
CDX4O14627 AC021613.1-201ENST00000623880 111 ntBASIC0.8□□□□□ -2.28
CDX4O14627 MIR6516-201ENST00000630554 81 ntBASIC0.8□□□□□ -2.28
CDX4O14627 MIR924-201ENST00000638017 53 ntBASIC0.8□□□□□ -2.28
CDX4O14627 Y_RNA.114-201ENST00000363265 113 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 200.8 ms