Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 RPS27P21-201ENST00000486977 252 ntBASIC2.05□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 RNA5SP168-201ENST00000516642 112 ntBASIC2.05□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 MIR3169-201ENST00000578032 83 ntBASIC2.05□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 Y_RNA.783-201ENST00000613546 102 ntBASIC2.05□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 AC105081.1-201ENST00000617727 106 ntBASIC2.05□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 MIR519C-201ENST00000385053 87 ntBASIC2.04□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 AL445685.2-201ENST00000422551 342 ntBASIC2.04□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 AC093729.1-201ENST00000513074 128 ntBASIC2.04□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 AL020996.3-201ENST00000606617 222 ntBASIC2.04□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 AC243994.1-201ENST00000618627 109 ntBASIC2.04□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.04□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 SNORD115-37-201ENST00000363768 82 ntBASIC2.03□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 RNU6-865P-201ENST00000364772 107 ntBASIC2.03□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 AL034345.1-201ENST00000407768 123 ntBASIC2.03□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 MIR548G-201ENST00000408442 89 ntBASIC2.03□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 AC104435.1-201ENST00000483483 166 ntBASIC2.03□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 MIR548AR-201ENST00000582191 57 ntBASIC2.03□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 AC020891.4-201ENST00000605745 93 ntBASIC2.03□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 AC145423.2-201ENST00000610631 239 ntBASIC2.03□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.03□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 RNU6-833P-201ENST00000363486 107 ntBASIC2.02□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 RNA5SP138-201ENST00000365098 114 ntBASIC2.02□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 MIR136-201ENST00000385207 82 ntBASIC2.02□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 RNU6-613P-201ENST00000410412 108 ntBASIC2.02□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 RNU6-1086P-201ENST00000410930 100 ntBASIC2.02□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 SNORD67.1-201ENST00000516618 108 ntBASIC2.02□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 RNU7-193P-201ENST00000516723 65 ntBASIC2.02□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 DEFB122-202ENST00000569013 197 ntBASIC2.02□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 AL513043.2-201ENST00000573941 143 ntBASIC2.02□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 MIR5094-201ENST00000578766 85 ntBASIC2.02□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 MIR4524B-201ENST00000581569 115 ntBASIC2.02□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 RNU6-90P-201ENST00000606352 106 ntBASIC2.02□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.02□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 MIR583-201ENST00000384846 75 ntBASIC2.01□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 MIR181B2-201ENST00000385004 89 ntBASIC2.01□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 MIR452-201ENST00000385020 85 ntBASIC2.01□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 RNA5SP270-201ENST00000411361 118 ntBASIC2.01□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 AL161932.1-201ENST00000437408 146 ntBASIC2.01□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 snoU13.23-201ENST00000458863 104 ntBASIC2.01□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 RNU7-153P-201ENST00000516455 62 ntBASIC2.01□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 MTND5P40-201ENST00000559945 246 ntBASIC2.01□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 AC022202.1-201ENST00000613515 211 ntBASIC2.01□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 SNORD3E-202ENST00000627253 216 ntBASIC2.01□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 RNU6-1321P-201ENST00000390905 107 ntBASIC2□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 RNU7-73P-201ENST00000458743 63 ntBASIC2□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 AC090255.1-201ENST00000495779 349 ntBASIC2□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 MIR514B-201ENST00000516774 80 ntBASIC2□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 MIR5002-201ENST00000584713 97 ntBASIC2□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 AC069114.2-201ENST00000604699 304 ntBASIC2□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 RNU6-1019P-201ENST00000364424 107 ntBASIC1.99□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 RNU6-1237P-201ENST00000384777 107 ntBASIC1.99□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 MIR17-201ENST00000385012 84 ntBASIC1.99□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 AL591806.2-201ENST00000433122 173 ntBASIC1.99□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.99□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 SNORD123-201ENST00000459473 70 ntBASIC1.99□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 RNU6-295P-201ENST00000516901 104 ntBASIC1.99□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.99□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 AC140658.3-201ENST00000567603 271 ntBASIC1.99□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 U7.4-201ENST00000614961 63 ntBASIC1.99□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 AC012676.2-201ENST00000619258 186 ntBASIC1.99□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 RNU4-32P-201ENST00000363404 141 ntBASIC1.98□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 SNORA24-201ENST00000384096 131 ntBASIC1.98□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 RNU6-519P-201ENST00000410590 108 ntBASIC1.98□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 RNA5SP233-201ENST00000459153 113 ntBASIC1.98□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 AC025033.1-201ENST00000463883 194 ntBASIC1.98□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 AC108210.2-201ENST00000503681 201 ntBASIC1.98□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 RNA5SP182-201ENST00000516064 82 ntBASIC1.98□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 RNU7-79P-201ENST00000516082 62 ntBASIC1.98□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 RNU7-35P-201ENST00000517174 62 ntBASIC1.98□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.98□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.98□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 Y_RNA.168-201ENST00000363740 102 ntBASIC1.97□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 Y_RNA.545-201ENST00000384652 105 ntBASIC1.97□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 MIR597-201ENST00000384968 97 ntBASIC1.97□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 U8.13-201ENST00000390842 128 ntBASIC1.97□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.97□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 AL356379.1-201ENST00000414105 126 ntBASIC1.97□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 BX510359.4-201ENST00000423750 193 ntBASIC1.97□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 AC004223.1-201ENST00000479840 271 ntBASIC1.97□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 AC079804.2-201ENST00000490376 200 ntBASIC1.97□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 RNU1-40P-201ENST00000516816 164 ntBASIC1.97□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 RNU1-97P-201ENST00000516872 164 ntBASIC1.97□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 RNU6-548P-201ENST00000517083 115 ntBASIC1.97□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.97□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 U4atac.1-201ENST00000618345 95 ntBASIC1.97□□□□□ -2.09
C1QTNF3-AMACRE9PGA6 Y_RNA.57-201ENST00000362806 113 ntBASIC1.96□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 RNA5SP37-201ENST00000365420 130 ntBASIC1.96□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 RNU6-1031P-201ENST00000384773 107 ntBASIC1.96□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 MIR526A1-201ENST00000384897 85 ntBASIC1.96□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 RNU6-129P-201ENST00000391022 107 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms