Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AL360085.1-201ENST00000604713 532 ntBASIC-0.51□□□□□ -2.49
RBFOX3A6NFN3 SNORD58B-201ENST00000607313 66 ntBASIC-0.51□□□□□ -2.49
RBFOX3A6NFN3 MIR6507-201ENST00000613630 70 ntBASIC-0.51□□□□□ -2.49
RBFOX3A6NFN3 AC007485.1-201ENST00000616755 206 ntBASIC-0.51□□□□□ -2.49
RBFOX3A6NFN3 AC091932.4-201ENST00000623386 200 ntBASIC-0.51□□□□□ -2.49
RBFOX3A6NFN3 MTND4LP32-201ENST00000636111 270 ntBASIC-0.51□□□□□ -2.49
RBFOX3A6NFN3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.51□□□□□ -2.49
RBFOX3A6NFN3 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.52□□□□□ -2.49
RBFOX3A6NFN3 SNORD113-8-201ENST00000363497 74 ntBASIC-0.52□□□□□ -2.49
RBFOX3A6NFN3 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.52□□□□□ -2.49
RBFOX3A6NFN3 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.52□□□□□ -2.49
RBFOX3A6NFN3 RNA5SP205-201ENST00000364653 136 ntBASIC-0.52□□□□□ -2.49
RBFOX3A6NFN3 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.52□□□□□ -2.49
RBFOX3A6NFN3 RNY1P13-201ENST00000365030 105 ntBASIC-0.52□□□□□ -2.49
RBFOX3A6NFN3 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.52□□□□□ -2.49
RBFOX3A6NFN3 RNU6-484P-201ENST00000384016 107 ntBASIC-0.52□□□□□ -2.49
RBFOX3A6NFN3 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.52□□□□□ -2.49
RBFOX3A6NFN3 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.52□□□□□ -2.49
RBFOX3A6NFN3 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.52□□□□□ -2.49
RBFOX3A6NFN3 Z95118.1-201ENST00000421372 247 ntBASIC-0.52□□□□□ -2.49
RBFOX3A6NFN3 PMCHL1-202ENST00000423102 261 ntBASIC-0.52□□□□□ -2.49
RBFOX3A6NFN3 RPS29P8-201ENST00000445109 171 ntBASIC-0.52□□□□□ -2.49
RBFOX3A6NFN3 RNU7-152P-201ENST00000458982 64 ntBASIC-0.52□□□□□ -2.49
RBFOX3A6NFN3 RNA5SP153-201ENST00000516498 76 ntBASIC-0.52□□□□□ -2.49
RBFOX3A6NFN3 RNU6-531P-201ENST00000516694 104 ntBASIC-0.52□□□□□ -2.49
RBFOX3A6NFN3 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.52□□□□□ -2.49
RBFOX3A6NFN3 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.52□□□□□ -2.49
RBFOX3A6NFN3 AC084368.1-201ENST00000620935 65 ntBASIC-0.52□□□□□ -2.49
RBFOX3A6NFN3 RNU4-90P-201ENST00000362773 141 ntBASIC-0.53□□□□□ -2.49
RBFOX3A6NFN3 RNU6-702P-201ENST00000364982 107 ntBASIC-0.53□□□□□ -2.49
RBFOX3A6NFN3 Y_RNA.318-201ENST00000365131 97 ntBASIC-0.53□□□□□ -2.49
RBFOX3A6NFN3 RNU6-102P-201ENST00000384485 104 ntBASIC-0.53□□□□□ -2.49
RBFOX3A6NFN3 SNORA20-201ENST00000384662 132 ntBASIC-0.53□□□□□ -2.49
RBFOX3A6NFN3 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.53□□□□□ -2.49
RBFOX3A6NFN3 AL022718.1-201ENST00000412004 84 ntBASIC-0.53□□□□□ -2.49
RBFOX3A6NFN3 BX276092.1-201ENST00000427368 251 ntBASIC-0.53□□□□□ -2.49
RBFOX3A6NFN3 AC244505.6-201ENST00000452829 130 ntBASIC-0.53□□□□□ -2.49
RBFOX3A6NFN3 MTND4LP30-201ENST00000454092 297 ntBASIC-0.53□□□□□ -2.49
RBFOX3A6NFN3 RNU7-104P-201ENST00000459398 79 ntBASIC-0.53□□□□□ -2.49
RBFOX3A6NFN3 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.53□□□□□ -2.49
RBFOX3A6NFN3 AC104985.2-201ENST00000620598 500 ntBASIC-0.53□□□□□ -2.49
RBFOX3A6NFN3 MIR376A2-201ENST00000636782 80 ntBASIC-0.53□□□□□ -2.49
RBFOX3A6NFN3 MIR6086-201ENST00000638065 55 ntBASIC-0.53□□□□□ -2.49
RBFOX3A6NFN3 SNORA22.1-201ENST00000362701 134 ntBASIC-0.54□□□□□ -2.5
RBFOX3A6NFN3 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.54□□□□□ -2.5
RBFOX3A6NFN3 SNORA25.7-201ENST00000364375 127 ntBASIC-0.54□□□□□ -2.5
RBFOX3A6NFN3 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.54□□□□□ -2.5
RBFOX3A6NFN3 MT-TL1-201ENST00000386347 75 ntBASIC-0.54□□□□□ -2.5
RBFOX3A6NFN3 SNORD110-201ENST00000408189 75 ntBASIC-0.54□□□□□ -2.5
RBFOX3A6NFN3 MIR5197-201ENST00000583721 112 ntBASIC-0.54□□□□□ -2.5
RBFOX3A6NFN3 RN7SL660P-201ENST00000614852 299 ntBASIC-0.54□□□□□ -2.5
RBFOX3A6NFN3 AC105081.1-201ENST00000617727 106 ntBASIC-0.54□□□□□ -2.5
RBFOX3A6NFN3 AC073869.9-201ENST00000641610 120 ntBASIC-0.54□□□□□ -2.5
RBFOX3A6NFN3 RNU4-58P-201ENST00000363192 141 ntBASIC-0.55□□□□□ -2.5
RBFOX3A6NFN3 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.55□□□□□ -2.5
RBFOX3A6NFN3 RNU4-84P-201ENST00000364200 139 ntBASIC-0.55□□□□□ -2.5
RBFOX3A6NFN3 U8.6-201ENST00000364939 135 ntBASIC-0.55□□□□□ -2.5
RBFOX3A6NFN3 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.55□□□□□ -2.5
RBFOX3A6NFN3 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.55□□□□□ -2.5
RBFOX3A6NFN3 SNORA18-201ENST00000384416 132 ntBASIC-0.55□□□□□ -2.5
RBFOX3A6NFN3 MIR516B1-201ENST00000385211 90 ntBASIC-0.55□□□□□ -2.5
RBFOX3A6NFN3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.55□□□□□ -2.5
RBFOX3A6NFN3 SNORD41.1-201ENST00000391000 69 ntBASIC-0.55□□□□□ -2.5
RBFOX3A6NFN3 AC006210.1-201ENST00000424882 111 ntBASIC-0.55□□□□□ -2.5
RBFOX3A6NFN3 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.55□□□□□ -2.5
RBFOX3A6NFN3 AC040926.1-201ENST00000530195 238 ntBASIC-0.55□□□□□ -2.5
RBFOX3A6NFN3 DEFB131E-201ENST00000532329 154 ntBASIC-0.55□□□□□ -2.5
RBFOX3A6NFN3 NAMPTP3-201ENST00000569273 224 ntBASIC-0.55□□□□□ -2.5
RBFOX3A6NFN3 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.55□□□□□ -2.5
RBFOX3A6NFN3 AC108676.2-201ENST00000605225 163 ntBASIC-0.55□□□□□ -2.5
RBFOX3A6NFN3 MIR376A1-201ENST00000616574 68 ntBASIC-0.55□□□□□ -2.5
RBFOX3A6NFN3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.56□□□□□ -2.5
RBFOX3A6NFN3 MIR101-2-201ENST00000362195 79 ntBASIC-0.56□□□□□ -2.5
RBFOX3A6NFN3 SNORD114-14-201ENST00000362723 75 ntBASIC-0.56□□□□□ -2.5
RBFOX3A6NFN3 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.56□□□□□ -2.5
RBFOX3A6NFN3 RNA5SP484-201ENST00000458857 111 ntBASIC-0.56□□□□□ -2.5
RBFOX3A6NFN3 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.56□□□□□ -2.5
RBFOX3A6NFN3 AC006006.1-201ENST00000603082 144 ntBASIC-0.56□□□□□ -2.5
RBFOX3A6NFN3 AC021613.1-201ENST00000623880 111 ntBASIC-0.56□□□□□ -2.5
RBFOX3A6NFN3 RNA5SP133-201ENST00000363368 119 ntBASIC-0.57□□□□□ -2.5
RBFOX3A6NFN3 RNA5SP403-201ENST00000363598 108 ntBASIC-0.57□□□□□ -2.5
RBFOX3A6NFN3 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.57□□□□□ -2.5
RBFOX3A6NFN3 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.57□□□□□ -2.5
RBFOX3A6NFN3 RNY3P5-201ENST00000384127 102 ntBASIC-0.57□□□□□ -2.5
RBFOX3A6NFN3 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.57□□□□□ -2.5
RBFOX3A6NFN3 MIR224-201ENST00000384889 81 ntBASIC-0.57□□□□□ -2.5
RBFOX3A6NFN3 MIR626-201ENST00000385032 94 ntBASIC-0.57□□□□□ -2.5
RBFOX3A6NFN3 RNU6-876P-201ENST00000391295 104 ntBASIC-0.57□□□□□ -2.5
RBFOX3A6NFN3 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.57□□□□□ -2.5
RBFOX3A6NFN3 RNU6-277P-201ENST00000516272 106 ntBASIC-0.57□□□□□ -2.5
RBFOX3A6NFN3 SNORA25.13-201ENST00000516395 103 ntBASIC-0.57□□□□□ -2.5
RBFOX3A6NFN3 AL356055.1-201ENST00000602528 446 ntBASIC-0.57□□□□□ -2.5
RBFOX3A6NFN3 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.57□□□□□ -2.5
RBFOX3A6NFN3 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.58□□□□□ -2.5
RBFOX3A6NFN3 RNU6-865P-201ENST00000364772 107 ntBASIC-0.58□□□□□ -2.5
RBFOX3A6NFN3 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.58□□□□□ -2.5
RBFOX3A6NFN3 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.58□□□□□ -2.5
RBFOX3A6NFN3 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
RBFOX3A6NFN3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
RBFOX3A6NFN3 SNORD115-46-201ENST00000390982 71 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms