Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 MIRLET7D-201ENST00000362263 87 ntBASIC0.34□□□□□ -2.36
SMIM28A0A1B0GU29 Y_RNA.42-201ENST00000362660 108 ntBASIC0.34□□□□□ -2.36
SMIM28A0A1B0GU29 RNU6-103P-201ENST00000363686 107 ntBASIC0.34□□□□□ -2.36
SMIM28A0A1B0GU29 RNA5SP517-201ENST00000364724 117 ntBASIC0.34□□□□□ -2.36
SMIM28A0A1B0GU29 Y_RNA.308-201ENST00000365043 101 ntBASIC0.34□□□□□ -2.36
SMIM28A0A1B0GU29 RNU4-45P-201ENST00000365469 141 ntBASIC0.34□□□□□ -2.36
SMIM28A0A1B0GU29 Y_RNA.617-201ENST00000410920 90 ntBASIC0.34□□□□□ -2.36
SMIM28A0A1B0GU29 AC096949.1-201ENST00000412047 152 ntBASIC0.34□□□□□ -2.36
SMIM28A0A1B0GU29 RNU2-4P-201ENST00000606190 192 ntBASIC0.34□□□□□ -2.36
SMIM28A0A1B0GU29 Y_RNA.459-201ENST00000384251 102 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 Y_RNA.539-201ENST00000384635 107 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 MIR568-201ENST00000385036 95 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 RNU6-1319P-201ENST00000390855 104 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 RNU6-747P-201ENST00000390928 104 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 RNU6-241P-201ENST00000391148 104 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 RNU6-447P-201ENST00000410293 104 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 RNU6-1118P-201ENST00000410382 104 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 RNU6-1076P-201ENST00000410397 104 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 RNU6-355P-201ENST00000410427 104 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 RNU6-791P-201ENST00000410467 104 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 RNU6-705P-201ENST00000410601 104 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 RNU6-1100P-201ENST00000410691 104 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 RNU6-860P-201ENST00000410860 104 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 RNU6-1217P-201ENST00000411276 104 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 RNU6-785P-201ENST00000411324 104 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 MTND2P23-201ENST00000422990 651 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 AL121914.1-201ENST00000450188 156 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 SCARNA15-202ENST00000516881 127 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 RNA5SP94-201ENST00000516917 108 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 MIR1273G-201ENST00000577677 100 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 MIR4308-201ENST00000580634 81 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 MIR4744-201ENST00000581563 82 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 AL360085.1-201ENST00000604713 532 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 U6.90-201ENST00000614007 104 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 U6.70-201ENST00000620287 104 ntBASIC0.33□□□□□ -2.36
SMIM28A0A1B0GU29 Y_RNA.149-201ENST00000363558 117 ntBASIC0.32□□□□□ -2.36
SMIM28A0A1B0GU29 SNORD27-201ENST00000363981 72 ntBASIC0.32□□□□□ -2.36
SMIM28A0A1B0GU29 RNU6-694P-201ENST00000364071 147 ntBASIC0.32□□□□□ -2.36
SMIM28A0A1B0GU29 RNU4-16P-201ENST00000364737 141 ntBASIC0.32□□□□□ -2.36
SMIM28A0A1B0GU29 RNU6-923P-201ENST00000364753 107 ntBASIC0.32□□□□□ -2.36
SMIM28A0A1B0GU29 RNY4P28-201ENST00000365281 93 ntBASIC0.32□□□□□ -2.36
SMIM28A0A1B0GU29 Y_RNA.430-201ENST00000384081 110 ntBASIC0.32□□□□□ -2.36
SMIM28A0A1B0GU29 RNU6-578P-201ENST00000390980 103 ntBASIC0.32□□□□□ -2.36
SMIM28A0A1B0GU29 RNU6-679P-201ENST00000391003 106 ntBASIC0.32□□□□□ -2.36
SMIM28A0A1B0GU29 SNORA79-201ENST00000408376 140 ntBASIC0.32□□□□□ -2.36
SMIM28A0A1B0GU29 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.32□□□□□ -2.36
SMIM28A0A1B0GU29 Y_RNA.618-201ENST00000410949 107 ntBASIC0.32□□□□□ -2.36
SMIM28A0A1B0GU29 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.32□□□□□ -2.36
SMIM28A0A1B0GU29 RNU7-80P-201ENST00000459562 61 ntBASIC0.32□□□□□ -2.36
SMIM28A0A1B0GU29 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.32□□□□□ -2.36
SMIM28A0A1B0GU29 AC092634.7-201ENST00000621022 103 ntBASIC0.32□□□□□ -2.36
SMIM28A0A1B0GU29 Y_RNA.288-201ENST00000364854 92 ntBASIC0.31□□□□□ -2.36
SMIM28A0A1B0GU29 Y_RNA.477-201ENST00000384352 108 ntBASIC0.31□□□□□ -2.36
SMIM28A0A1B0GU29 U8.15-201ENST00000390947 134 ntBASIC0.31□□□□□ -2.36
SMIM28A0A1B0GU29 MIR548H3-201ENST00000408771 118 ntBASIC0.31□□□□□ -2.36
SMIM28A0A1B0GU29 RNU4-83P-201ENST00000410863 133 ntBASIC0.31□□□□□ -2.36
SMIM28A0A1B0GU29 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.31□□□□□ -2.36
SMIM28A0A1B0GU29 Y_RNA.668-201ENST00000516233 93 ntBASIC0.31□□□□□ -2.36
SMIM28A0A1B0GU29 RNU6-1149P-201ENST00000516810 97 ntBASIC0.31□□□□□ -2.36
SMIM28A0A1B0GU29 RNU6-448P-201ENST00000517052 107 ntBASIC0.31□□□□□ -2.36
SMIM28A0A1B0GU29 AC133485.4-201ENST00000561835 220 ntBASIC0.31□□□□□ -2.36
SMIM28A0A1B0GU29 AC141846.1-201ENST00000568348 142 ntBASIC0.31□□□□□ -2.36
SMIM28A0A1B0GU29 SNORA25.18-201ENST00000607153 114 ntBASIC0.31□□□□□ -2.36
SMIM28A0A1B0GU29 AC021613.1-201ENST00000623880 111 ntBASIC0.31□□□□□ -2.36
SMIM28A0A1B0GU29 MIR103A1-201ENST00000362165 78 ntBASIC0.3□□□□□ -2.36
SMIM28A0A1B0GU29 SNORA22.1-201ENST00000362701 134 ntBASIC0.3□□□□□ -2.36
SMIM28A0A1B0GU29 RNU6-1336P-201ENST00000383886 109 ntBASIC0.3□□□□□ -2.36
SMIM28A0A1B0GU29 Y_RNA.454-201ENST00000384224 113 ntBASIC0.3□□□□□ -2.36
SMIM28A0A1B0GU29 Y_RNA.588-201ENST00000391254 102 ntBASIC0.3□□□□□ -2.36
SMIM28A0A1B0GU29 SNORD93-201ENST00000408813 74 ntBASIC0.3□□□□□ -2.36
SMIM28A0A1B0GU29 RNA5SP237-201ENST00000410414 113 ntBASIC0.3□□□□□ -2.36
SMIM28A0A1B0GU29 MTCYBP9-201ENST00000431021 303 ntBASIC0.3□□□□□ -2.36
SMIM28A0A1B0GU29 Y_RNA.680-201ENST00000516441 93 ntBASIC0.3□□□□□ -2.36
SMIM28A0A1B0GU29 SNORD116-25-201ENST00000516517 92 ntBASIC0.3□□□□□ -2.36
SMIM28A0A1B0GU29 MIR378D2-201ENST00000580636 98 ntBASIC0.3□□□□□ -2.36
SMIM28A0A1B0GU29 Y_RNA.13-201ENST00000362403 112 ntBASIC0.29□□□□□ -2.36
SMIM28A0A1B0GU29 Y_RNA.133-201ENST00000363428 110 ntBASIC0.29□□□□□ -2.36
SMIM28A0A1B0GU29 RNU6-643P-201ENST00000384018 107 ntBASIC0.29□□□□□ -2.36
SMIM28A0A1B0GU29 RNA5SP261-201ENST00000410536 106 ntBASIC0.29□□□□□ -2.36
SMIM28A0A1B0GU29 RNA5SP127-201ENST00000411051 133 ntBASIC0.29□□□□□ -2.36
SMIM28A0A1B0GU29 RNU6-1258P-201ENST00000516911 111 ntBASIC0.29□□□□□ -2.36
SMIM28A0A1B0GU29 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
SMIM28A0A1B0GU29 MIR3678-201ENST00000578455 94 ntBASIC0.29□□□□□ -2.36
SMIM28A0A1B0GU29 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.29□□□□□ -2.36
SMIM28A0A1B0GU29 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
SMIM28A0A1B0GU29 SNORA36.1-201ENST00000363424 132 ntBASIC0.28□□□□□ -2.36
SMIM28A0A1B0GU29 SNORA8.2-201ENST00000384372 139 ntBASIC0.28□□□□□ -2.36
SMIM28A0A1B0GU29 Y_RNA.571-201ENST00000384753 98 ntBASIC0.28□□□□□ -2.36
SMIM28A0A1B0GU29 MIR518A1-201ENST00000385068 85 ntBASIC0.28□□□□□ -2.36
SMIM28A0A1B0GU29 MIR624-201ENST00000385217 97 ntBASIC0.28□□□□□ -2.36
SMIM28A0A1B0GU29 SNORD58.1-201ENST00000391313 66 ntBASIC0.28□□□□□ -2.36
SMIM28A0A1B0GU29 Y_RNA.626-201ENST00000411288 95 ntBASIC0.28□□□□□ -2.36
SMIM28A0A1B0GU29 MRPS18CP4-201ENST00000535821 231 ntBASIC0.28□□□□□ -2.36
SMIM28A0A1B0GU29 Y_RNA.32-201ENST00000362589 110 ntBASIC0.27□□□□□ -2.37
SMIM28A0A1B0GU29 Y_RNA.65-201ENST00000362846 100 ntBASIC0.27□□□□□ -2.37
SMIM28A0A1B0GU29 Y_RNA.182-201ENST00000363880 111 ntBASIC0.27□□□□□ -2.37
SMIM28A0A1B0GU29 SNORA18-201ENST00000384416 132 ntBASIC0.27□□□□□ -2.37
SMIM28A0A1B0GU29 SNORA20-201ENST00000384662 132 ntBASIC0.27□□□□□ -2.37
SMIM28A0A1B0GU29 RNU6-1011P-201ENST00000384668 107 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 239 ms