Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 SNORD79.1-201ENST00000516069 84 ntBASIC1.11□□□□□ -2.23
IGHV4-28A0A0C4DH34 MIR4264-201ENST00000583520 66 ntBASIC1.11□□□□□ -2.23
IGHV4-28A0A0C4DH34 AL645939.4-201ENST00000604495 135 ntBASIC1.11□□□□□ -2.23
IGHV4-28A0A0C4DH34 U2.22-201ENST00000636441 106 ntBASIC1.11□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNU6-60P-201ENST00000364792 103 ntBASIC1.1□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNU6-22P-201ENST00000384355 107 ntBASIC1.1□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNU6-342P-201ENST00000384521 104 ntBASIC1.1□□□□□ -2.23
IGHV4-28A0A0C4DH34 SNORA2B-201ENST00000384583 137 ntBASIC1.1□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNU6-1104P-201ENST00000384723 104 ntBASIC1.1□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNU6-1237P-201ENST00000384777 107 ntBASIC1.1□□□□□ -2.23
IGHV4-28A0A0C4DH34 RN7SKP179-201ENST00000516126 217 ntBASIC1.1□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNU6-62P-201ENST00000516526 102 ntBASIC1.1□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNA5SP33-201ENST00000516687 98 ntBASIC1.1□□□□□ -2.23
IGHV4-28A0A0C4DH34 SNORA31.24-201ENST00000517232 57 ntBASIC1.1□□□□□ -2.23
IGHV4-28A0A0C4DH34 AC023827.1-201ENST00000569247 97 ntBASIC1.1□□□□□ -2.23
IGHV4-28A0A0C4DH34 AC025166.1-201ENST00000612411 163 ntBASIC1.1□□□□□ -2.23
IGHV4-28A0A0C4DH34 MIR6740-201ENST00000618268 113 ntBASIC1.1□□□□□ -2.23
IGHV4-28A0A0C4DH34 AC008163.1-202ENST00000636004 2889 ntBASIC1.1□□□□□ -2.23
IGHV4-28A0A0C4DH34 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
IGHV4-28A0A0C4DH34 SNORD26-201ENST00000384147 75 ntBASIC1.09□□□□□ -2.23
IGHV4-28A0A0C4DH34 SNORA25-201ENST00000384384 134 ntBASIC1.09□□□□□ -2.23
IGHV4-28A0A0C4DH34 SNORA18-201ENST00000384416 132 ntBASIC1.09□□□□□ -2.23
IGHV4-28A0A0C4DH34 MIR588-201ENST00000384900 83 ntBASIC1.09□□□□□ -2.23
IGHV4-28A0A0C4DH34 MIRLET7F2-201ENST00000385277 83 ntBASIC1.09□□□□□ -2.23
IGHV4-28A0A0C4DH34 MIR1304-201ENST00000408243 91 ntBASIC1.09□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNA5SP136-201ENST00000410906 107 ntBASIC1.09□□□□□ -2.23
IGHV4-28A0A0C4DH34 MRPL35P3-201ENST00000421557 364 ntBASIC1.09□□□□□ -2.23
IGHV4-28A0A0C4DH34 RNU7-62P-201ENST00000458856 62 ntBASIC1.09□□□□□ -2.23
IGHV4-28A0A0C4DH34 AC023790.1-201ENST00000482174 347 ntBASIC1.09□□□□□ -2.23
IGHV4-28A0A0C4DH34 Y_RNA.712-201ENST00000517011 92 ntBASIC1.09□□□□□ -2.23
IGHV4-28A0A0C4DH34 AC019288.1-201ENST00000557918 224 ntBASIC1.09□□□□□ -2.23
IGHV4-28A0A0C4DH34 AL512598.1-201ENST00000610158 273 ntBASIC1.09□□□□□ -2.23
IGHV4-28A0A0C4DH34 MIR3914-2-201ENST00000637339 95 ntBASIC1.09□□□□□ -2.23
IGHV4-28A0A0C4DH34 MTND5P18-201ENST00000445624 1801 ntBASIC1.08□□□□□ -2.24
IGHV4-28A0A0C4DH34 MIR377-201ENST00000362145 69 ntBASIC1.08□□□□□ -2.24
IGHV4-28A0A0C4DH34 SNORA32-201ENST00000384072 121 ntBASIC1.08□□□□□ -2.24
IGHV4-28A0A0C4DH34 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.08□□□□□ -2.24
IGHV4-28A0A0C4DH34 BTF3P4-201ENST00000418852 495 ntBASIC1.08□□□□□ -2.24
IGHV4-28A0A0C4DH34 AL354695.1-201ENST00000427935 228 ntBASIC1.08□□□□□ -2.24
IGHV4-28A0A0C4DH34 snoU13.2-201ENST00000459201 104 ntBASIC1.08□□□□□ -2.24
IGHV4-28A0A0C4DH34 RNU7-90P-201ENST00000459216 62 ntBASIC1.08□□□□□ -2.24
IGHV4-28A0A0C4DH34 RNU1-92P-201ENST00000517017 135 ntBASIC1.08□□□□□ -2.24
IGHV4-28A0A0C4DH34 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.08□□□□□ -2.24
IGHV4-28A0A0C4DH34 AC036111.3-201ENST00000526389 112 ntBASIC1.08□□□□□ -2.24
IGHV4-28A0A0C4DH34 MIR548AE2-201ENST00000583456 67 ntBASIC1.08□□□□□ -2.24
IGHV4-28A0A0C4DH34 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.08□□□□□ -2.24
IGHV4-28A0A0C4DH34 MIR26B-201ENST00000362251 77 ntBASIC1.07□□□□□ -2.24
IGHV4-28A0A0C4DH34 SNORD115-2-201ENST00000362842 82 ntBASIC1.07□□□□□ -2.24
IGHV4-28A0A0C4DH34 SNORD115-20-201ENST00000365099 82 ntBASIC1.07□□□□□ -2.24
IGHV4-28A0A0C4DH34 Y_RNA.338-201ENST00000365320 114 ntBASIC1.07□□□□□ -2.24
IGHV4-28A0A0C4DH34 MT-TI-201ENST00000387365 69 ntBASIC1.07□□□□□ -2.24
IGHV4-28A0A0C4DH34 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
IGHV4-28A0A0C4DH34 RNU6-1154P-201ENST00000391001 104 ntBASIC1.07□□□□□ -2.24
IGHV4-28A0A0C4DH34 RNA5SP237-201ENST00000410414 113 ntBASIC1.07□□□□□ -2.24
IGHV4-28A0A0C4DH34 RPS23P4-201ENST00000487908 423 ntBASIC1.07□□□□□ -2.24
IGHV4-28A0A0C4DH34 COX6CP6-201ENST00000490840 228 ntBASIC1.07□□□□□ -2.24
IGHV4-28A0A0C4DH34 RNU6-313P-201ENST00000516317 112 ntBASIC1.07□□□□□ -2.24
IGHV4-28A0A0C4DH34 uc_338.6-201ENST00000613544 171 ntBASIC1.07□□□□□ -2.24
IGHV4-28A0A0C4DH34 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
IGHV4-28A0A0C4DH34 Y_RNA.168-201ENST00000363740 102 ntBASIC1.06□□□□□ -2.24
IGHV4-28A0A0C4DH34 Y_RNA.198-201ENST00000364013 98 ntBASIC1.06□□□□□ -2.24
IGHV4-28A0A0C4DH34 Y_RNA.213-201ENST00000364178 111 ntBASIC1.06□□□□□ -2.24
IGHV4-28A0A0C4DH34 SNORD113.3-201ENST00000364630 78 ntBASIC1.06□□□□□ -2.24
IGHV4-28A0A0C4DH34 Y_RNA.346-201ENST00000365385 112 ntBASIC1.06□□□□□ -2.24
IGHV4-28A0A0C4DH34 SNORA22C-201ENST00000384614 134 ntBASIC1.06□□□□□ -2.24
IGHV4-28A0A0C4DH34 RNU6-997P-201ENST00000384725 107 ntBASIC1.06□□□□□ -2.24
IGHV4-28A0A0C4DH34 RNU6-1168P-201ENST00000390831 104 ntBASIC1.06□□□□□ -2.24
IGHV4-28A0A0C4DH34 SNORD12-201ENST00000391002 90 ntBASIC1.06□□□□□ -2.24
IGHV4-28A0A0C4DH34 AC063976.4-201ENST00000421971 163 ntBASIC1.06□□□□□ -2.24
IGHV4-28A0A0C4DH34 AC002429.1-201ENST00000437672 148 ntBASIC1.06□□□□□ -2.24
IGHV4-28A0A0C4DH34 RPS29P23-201ENST00000458635 123 ntBASIC1.06□□□□□ -2.24
IGHV4-28A0A0C4DH34 RNU7-95P-201ENST00000459222 64 ntBASIC1.06□□□□□ -2.24
IGHV4-28A0A0C4DH34 AC108729.3-201ENST00000513484 108 ntBASIC1.06□□□□□ -2.24
IGHV4-28A0A0C4DH34 RNU6-479P-201ENST00000516348 105 ntBASIC1.06□□□□□ -2.24
IGHV4-28A0A0C4DH34 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
IGHV4-28A0A0C4DH34 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
IGHV4-28A0A0C4DH34 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
IGHV4-28A0A0C4DH34 ZNF209P-201ENST00000593450 2304 ntBASIC1.05□□□□□ -2.24
IGHV4-28A0A0C4DH34 RNU6-580P-201ENST00000365159 107 ntBASIC1.05□□□□□ -2.24
IGHV4-28A0A0C4DH34 MIR759-201ENST00000390224 91 ntBASIC1.05□□□□□ -2.24
IGHV4-28A0A0C4DH34 RNU6-1165P-201ENST00000410119 107 ntBASIC1.05□□□□□ -2.24
IGHV4-28A0A0C4DH34 RNU4-69P-201ENST00000410677 143 ntBASIC1.05□□□□□ -2.24
IGHV4-28A0A0C4DH34 RNU2-51P-201ENST00000410708 197 ntBASIC1.05□□□□□ -2.24
IGHV4-28A0A0C4DH34 AP1B1P2-201ENST00000416196 106 ntBASIC1.05□□□□□ -2.24
IGHV4-28A0A0C4DH34 snoU13.21-201ENST00000459368 105 ntBASIC1.05□□□□□ -2.24
IGHV4-28A0A0C4DH34 SNORD33.1-201ENST00000516213 88 ntBASIC1.05□□□□□ -2.24
IGHV4-28A0A0C4DH34 snoU13.31-201ENST00000607291 104 ntBASIC1.05□□□□□ -2.24
IGHV4-28A0A0C4DH34 RNU6-94P-201ENST00000607728 107 ntBASIC1.05□□□□□ -2.24
IGHV4-28A0A0C4DH34 AC106800.4-201ENST00000614905 153 ntBASIC1.05□□□□□ -2.24
IGHV4-28A0A0C4DH34 AL662814.1-201ENST00000617364 121 ntBASIC1.05□□□□□ -2.24
IGHV4-28A0A0C4DH34 AC027335.2-201ENST00000624030 375 ntBASIC1.05□□□□□ -2.24
IGHV4-28A0A0C4DH34 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
IGHV4-28A0A0C4DH34 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.04□□□□□ -2.24
IGHV4-28A0A0C4DH34 Y_RNA.299-201ENST00000364973 94 ntBASIC1.04□□□□□ -2.24
IGHV4-28A0A0C4DH34 MIR563-201ENST00000385080 79 ntBASIC1.04□□□□□ -2.24
IGHV4-28A0A0C4DH34 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.04□□□□□ -2.24
IGHV4-28A0A0C4DH34 RNU6-955P-201ENST00000410497 104 ntBASIC1.04□□□□□ -2.24
IGHV4-28A0A0C4DH34 RNU6-735P-201ENST00000410612 107 ntBASIC1.04□□□□□ -2.24
IGHV4-28A0A0C4DH34 RNU7-6P-201ENST00000516845 62 ntBASIC1.04□□□□□ -2.24
IGHV4-28A0A0C4DH34 AC141846.1-201ENST00000568348 142 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms