Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 MIR513C-201ENST00000401352 84 ntBASIC1.21□□□□□ -2.22
SNX9Q9Y5X1 AL603914.1-201ENST00000401964 204 ntBASIC1.21□□□□□ -2.22
SNX9Q9Y5X1 AC090844.1-201ENST00000422019 156 ntBASIC1.21□□□□□ -2.22
SNX9Q9Y5X1 snoU13.16-201ENST00000459350 104 ntBASIC1.21□□□□□ -2.22
SNX9Q9Y5X1 RNU7-80P-201ENST00000459562 61 ntBASIC1.21□□□□□ -2.22
SNX9Q9Y5X1 HSPE1P19-201ENST00000603327 295 ntBASIC1.21□□□□□ -2.22
SNX9Q9Y5X1 AL020996.3-201ENST00000606617 222 ntBASIC1.21□□□□□ -2.22
SNX9Q9Y5X1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
SNX9Q9Y5X1 RNU6-349P-201ENST00000362402 107 ntBASIC1.2□□□□□ -2.22
SNX9Q9Y5X1 RNA5SP264-201ENST00000363115 107 ntBASIC1.2□□□□□ -2.22
SNX9Q9Y5X1 Y_RNA.420-201ENST00000384043 110 ntBASIC1.2□□□□□ -2.22
SNX9Q9Y5X1 SNORA20-201ENST00000384662 132 ntBASIC1.2□□□□□ -2.22
SNX9Q9Y5X1 RNU6-1190P-201ENST00000410811 104 ntBASIC1.2□□□□□ -2.22
SNX9Q9Y5X1 RPL39P39-201ENST00000455840 151 ntBASIC1.2□□□□□ -2.22
SNX9Q9Y5X1 MIR3121-201ENST00000579680 77 ntBASIC1.2□□□□□ -2.22
SNX9Q9Y5X1 MIR342-201ENST00000362212 99 ntBASIC1.19□□□□□ -2.22
SNX9Q9Y5X1 RNA5SP48-201ENST00000363969 126 ntBASIC1.19□□□□□ -2.22
SNX9Q9Y5X1 SNORD50.2-201ENST00000365465 70 ntBASIC1.19□□□□□ -2.22
SNX9Q9Y5X1 MRPL35P3-201ENST00000421557 364 ntBASIC1.19□□□□□ -2.22
SNX9Q9Y5X1 AL591704.2-201ENST00000421658 181 ntBASIC1.19□□□□□ -2.22
SNX9Q9Y5X1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.19□□□□□ -2.22
SNX9Q9Y5X1 RNU7-45P-201ENST00000459460 63 ntBASIC1.19□□□□□ -2.22
SNX9Q9Y5X1 RNU7-40P-201ENST00000516397 64 ntBASIC1.19□□□□□ -2.22
SNX9Q9Y5X1 RNU7-53P-201ENST00000516705 60 ntBASIC1.19□□□□□ -2.22
SNX9Q9Y5X1 MIR4295-201ENST00000585286 85 ntBASIC1.19□□□□□ -2.22
SNX9Q9Y5X1 Z97988.1-201ENST00000637697 135 ntBASIC1.19□□□□□ -2.22
SNX9Q9Y5X1 Y_RNA.224-201ENST00000364308 111 ntBASIC1.18□□□□□ -2.22
SNX9Q9Y5X1 RNU1-133P-201ENST00000364867 167 ntBASIC1.18□□□□□ -2.22
SNX9Q9Y5X1 Y_RNA.454-201ENST00000384224 113 ntBASIC1.18□□□□□ -2.22
SNX9Q9Y5X1 MIR548M-201ENST00000408260 86 ntBASIC1.18□□□□□ -2.22
SNX9Q9Y5X1 RNU6-257P-201ENST00000410238 98 ntBASIC1.18□□□□□ -2.22
SNX9Q9Y5X1 MTND4LP9-201ENST00000427694 174 ntBASIC1.18□□□□□ -2.22
SNX9Q9Y5X1 HMGN1P33-201ENST00000432945 451 ntBASIC1.18□□□□□ -2.22
SNX9Q9Y5X1 SNORA31.2-201ENST00000516019 134 ntBASIC1.18□□□□□ -2.22
SNX9Q9Y5X1 AC010332.2-201ENST00000613083 1904 ntBASIC1.18□□□□□ -2.22
SNX9Q9Y5X1 AL596211.1-201ENST00000569873 2277 ntBASIC1.18□□□□□ -2.22
SNX9Q9Y5X1 Y_RNA.118-201ENST00000363300 101 ntBASIC1.17□□□□□ -2.22
SNX9Q9Y5X1 RNU6-915P-201ENST00000364943 103 ntBASIC1.17□□□□□ -2.22
SNX9Q9Y5X1 RNU6-1319P-201ENST00000390855 104 ntBASIC1.17□□□□□ -2.22
SNX9Q9Y5X1 RNU6-747P-201ENST00000390928 104 ntBASIC1.17□□□□□ -2.22
SNX9Q9Y5X1 RNU6-241P-201ENST00000391148 104 ntBASIC1.17□□□□□ -2.22
SNX9Q9Y5X1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.17□□□□□ -2.22
SNX9Q9Y5X1 RNU6-177P-201ENST00000411257 104 ntBASIC1.17□□□□□ -2.22
SNX9Q9Y5X1 AC244023.1-201ENST00000426884 112 ntBASIC1.17□□□□□ -2.22
SNX9Q9Y5X1 AC087343.1-201ENST00000477341 475 ntBASIC1.17□□□□□ -2.22
SNX9Q9Y5X1 Y_RNA.690-201ENST00000516603 95 ntBASIC1.17□□□□□ -2.22
SNX9Q9Y5X1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.17□□□□□ -2.22
SNX9Q9Y5X1 AC242498.1-201ENST00000604134 111 ntBASIC1.17□□□□□ -2.22
SNX9Q9Y5X1 AL022345.2-201ENST00000606307 135 ntBASIC1.17□□□□□ -2.22
SNX9Q9Y5X1 MIR6717-201ENST00000622747 73 ntBASIC1.17□□□□□ -2.22
SNX9Q9Y5X1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.17□□□□□ -2.22
SNX9Q9Y5X1 Y_RNA.280-201ENST00000364765 112 ntBASIC1.16□□□□□ -2.22
SNX9Q9Y5X1 Y_RNA.343-201ENST00000365354 112 ntBASIC1.16□□□□□ -2.22
SNX9Q9Y5X1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.16□□□□□ -2.22
SNX9Q9Y5X1 MIR6516-201ENST00000630554 81 ntBASIC1.16□□□□□ -2.22
SNX9Q9Y5X1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.16□□□□□ -2.22
SNX9Q9Y5X1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.15□□□□□ -2.23
SNX9Q9Y5X1 RNU6-704P-201ENST00000364162 103 ntBASIC1.15□□□□□ -2.23
SNX9Q9Y5X1 Y_RNA.430-201ENST00000384081 110 ntBASIC1.15□□□□□ -2.23
SNX9Q9Y5X1 Y_RNA.508-201ENST00000384502 114 ntBASIC1.15□□□□□ -2.23
SNX9Q9Y5X1 MIR613-201ENST00000385248 95 ntBASIC1.15□□□□□ -2.23
SNX9Q9Y5X1 SNORA75.2-201ENST00000391138 150 ntBASIC1.15□□□□□ -2.23
SNX9Q9Y5X1 Y_RNA.586-201ENST00000391146 98 ntBASIC1.15□□□□□ -2.23
SNX9Q9Y5X1 SNORA75.3-201ENST00000391231 150 ntBASIC1.15□□□□□ -2.23
SNX9Q9Y5X1 AL603908.1-201ENST00000406098 201 ntBASIC1.15□□□□□ -2.23
SNX9Q9Y5X1 MTATP6P21-201ENST00000440681 189 ntBASIC1.15□□□□□ -2.23
SNX9Q9Y5X1 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.15□□□□□ -2.23
SNX9Q9Y5X1 RNU11-2P-201ENST00000516898 142 ntBASIC1.15□□□□□ -2.23
SNX9Q9Y5X1 AP001328.1-201ENST00000528550 176 ntBASIC1.15□□□□□ -2.23
SNX9Q9Y5X1 AC108081.1-201ENST00000604358 221 ntBASIC1.15□□□□□ -2.23
SNX9Q9Y5X1 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.15□□□□□ -2.23
SNX9Q9Y5X1 AC021613.1-201ENST00000623880 111 ntBASIC1.15□□□□□ -2.23
SNX9Q9Y5X1 MIR6841-201ENST00000637129 72 ntBASIC1.15□□□□□ -2.23
SNX9Q9Y5X1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SNX9Q9Y5X1 MIR302B-201ENST00000362188 73 ntBASIC1.14□□□□□ -2.23
SNX9Q9Y5X1 Y_RNA.294-201ENST00000364916 102 ntBASIC1.14□□□□□ -2.23
SNX9Q9Y5X1 SNORD18B-201ENST00000365659 72 ntBASIC1.14□□□□□ -2.23
SNX9Q9Y5X1 RNY1P6-201ENST00000384193 109 ntBASIC1.14□□□□□ -2.23
SNX9Q9Y5X1 RNU6-910P-201ENST00000390844 107 ntBASIC1.14□□□□□ -2.23
SNX9Q9Y5X1 MIR1285-1-201ENST00000408593 84 ntBASIC1.14□□□□□ -2.23
SNX9Q9Y5X1 RNU6-602P-201ENST00000411155 105 ntBASIC1.14□□□□□ -2.23
SNX9Q9Y5X1 POLR2J4-204ENST00000418424 324 ntBASIC1.14□□□□□ -2.23
SNX9Q9Y5X1 SNORD79.1-201ENST00000516069 84 ntBASIC1.14□□□□□ -2.23
SNX9Q9Y5X1 RNA5SP102-201ENST00000516865 106 ntBASIC1.14□□□□□ -2.23
SNX9Q9Y5X1 RNA5SP404-201ENST00000517118 132 ntBASIC1.14□□□□□ -2.23
SNX9Q9Y5X1 SNORD114-21-201ENST00000606412 72 ntBASIC1.14□□□□□ -2.23
SNX9Q9Y5X1 AC011603.4-201ENST00000611325 277 ntBASIC1.14□□□□□ -2.23
SNX9Q9Y5X1 MIR103A2-201ENST00000362154 78 ntBASIC1.13□□□□□ -2.23
SNX9Q9Y5X1 SNORD114-27-201ENST00000363766 70 ntBASIC1.13□□□□□ -2.23
SNX9Q9Y5X1 RNU6-654P-201ENST00000364373 107 ntBASIC1.13□□□□□ -2.23
SNX9Q9Y5X1 MIR518E-201ENST00000385252 88 ntBASIC1.13□□□□□ -2.23
SNX9Q9Y5X1 RNU7-21P-201ENST00000459430 62 ntBASIC1.13□□□□□ -2.23
SNX9Q9Y5X1 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
SNX9Q9Y5X1 RPS23P4-201ENST00000487908 423 ntBASIC1.13□□□□□ -2.23
SNX9Q9Y5X1 Y_RNA.692-201ENST00000516627 105 ntBASIC1.13□□□□□ -2.23
SNX9Q9Y5X1 RNU6-113P-201ENST00000516653 101 ntBASIC1.13□□□□□ -2.23
SNX9Q9Y5X1 RNU6-1258P-201ENST00000516911 111 ntBASIC1.13□□□□□ -2.23
SNX9Q9Y5X1 RNU7-70P-201ENST00000516941 66 ntBASIC1.13□□□□□ -2.23
SNX9Q9Y5X1 MIR6504-201ENST00000613520 61 ntBASIC1.13□□□□□ -2.23
SNX9Q9Y5X1 SEPT14P17-201ENST00000617978 177 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms