Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.13□□□□□ -2.23
CLDN16Q9Y5I7 AC012676.2-201ENST00000619258 186 ntBASIC1.13□□□□□ -2.23
CLDN16Q9Y5I7 AC027335.2-201ENST00000624030 375 ntBASIC1.13□□□□□ -2.23
CLDN16Q9Y5I7 Y_RNA.180-201ENST00000363867 113 ntBASIC1.12□□□□□ -2.23
CLDN16Q9Y5I7 RNU6-205P-201ENST00000390858 107 ntBASIC1.12□□□□□ -2.23
CLDN16Q9Y5I7 Y_RNA.580-201ENST00000391004 95 ntBASIC1.12□□□□□ -2.23
CLDN16Q9Y5I7 RNA5SP95-201ENST00000410319 137 ntBASIC1.12□□□□□ -2.23
CLDN16Q9Y5I7 RPS3AP1-201ENST00000413190 320 ntBASIC1.12□□□□□ -2.23
CLDN16Q9Y5I7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.12□□□□□ -2.23
CLDN16Q9Y5I7 Z97988.1-201ENST00000637697 135 ntBASIC1.12□□□□□ -2.23
CLDN16Q9Y5I7 RNU4-16P-201ENST00000364737 141 ntBASIC1.11□□□□□ -2.23
CLDN16Q9Y5I7 RNU6-209P-201ENST00000384118 107 ntBASIC1.11□□□□□ -2.23
CLDN16Q9Y5I7 RNU6-125P-201ENST00000384505 107 ntBASIC1.11□□□□□ -2.23
CLDN16Q9Y5I7 AC108729.3-201ENST00000513484 108 ntBASIC1.11□□□□□ -2.23
CLDN16Q9Y5I7 RNU5E-3P-201ENST00000515913 68 ntBASIC1.11□□□□□ -2.23
CLDN16Q9Y5I7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.11□□□□□ -2.23
CLDN16Q9Y5I7 MIR6717-201ENST00000622747 73 ntBASIC1.11□□□□□ -2.23
CLDN16Q9Y5I7 AC021753.1-201ENST00000635724 168 ntBASIC1.11□□□□□ -2.23
CLDN16Q9Y5I7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
CLDN16Q9Y5I7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
CLDN16Q9Y5I7 Y_RNA.354-201ENST00000365448 111 ntBASIC1.1□□□□□ -2.23
CLDN16Q9Y5I7 RNU6-613P-201ENST00000410412 108 ntBASIC1.1□□□□□ -2.23
CLDN16Q9Y5I7 RNU6-1053P-201ENST00000515930 101 ntBASIC1.1□□□□□ -2.23
CLDN16Q9Y5I7 SNORA25.12-201ENST00000516202 82 ntBASIC1.1□□□□□ -2.23
CLDN16Q9Y5I7 HSPE1P19-201ENST00000603327 295 ntBASIC1.1□□□□□ -2.23
CLDN16Q9Y5I7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CLDN16Q9Y5I7 SNORD113.3-201ENST00000364630 78 ntBASIC1.09□□□□□ -2.23
CLDN16Q9Y5I7 RNY1P6-201ENST00000384193 109 ntBASIC1.09□□□□□ -2.23
CLDN16Q9Y5I7 Y_RNA.464-201ENST00000384282 110 ntBASIC1.09□□□□□ -2.23
CLDN16Q9Y5I7 RNU6-1319P-201ENST00000390855 104 ntBASIC1.09□□□□□ -2.23
CLDN16Q9Y5I7 RNU6-747P-201ENST00000390928 104 ntBASIC1.09□□□□□ -2.23
CLDN16Q9Y5I7 RNU6-241P-201ENST00000391148 104 ntBASIC1.09□□□□□ -2.23
CLDN16Q9Y5I7 RNU6-994P-201ENST00000410507 111 ntBASIC1.09□□□□□ -2.23
CLDN16Q9Y5I7 RNU6-177P-201ENST00000411257 104 ntBASIC1.09□□□□□ -2.23
CLDN16Q9Y5I7 UBL5P1-201ENST00000507979 193 ntBASIC1.09□□□□□ -2.23
CLDN16Q9Y5I7 MIR4264-201ENST00000583520 66 ntBASIC1.09□□□□□ -2.23
CLDN16Q9Y5I7 AC021613.1-201ENST00000623880 111 ntBASIC1.09□□□□□ -2.23
CLDN16Q9Y5I7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
CLDN16Q9Y5I7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.08□□□□□ -2.24
CLDN16Q9Y5I7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.08□□□□□ -2.24
CLDN16Q9Y5I7 SNORD111-201ENST00000408139 94 ntBASIC1.08□□□□□ -2.24
CLDN16Q9Y5I7 RNU6-602P-201ENST00000411155 105 ntBASIC1.08□□□□□ -2.24
CLDN16Q9Y5I7 TRMT112P2-201ENST00000512910 132 ntBASIC1.08□□□□□ -2.24
CLDN16Q9Y5I7 RN7SKP179-201ENST00000516126 217 ntBASIC1.08□□□□□ -2.24
CLDN16Q9Y5I7 MTND5P41-201ENST00000517498 206 ntBASIC1.08□□□□□ -2.24
CLDN16Q9Y5I7 AC036111.3-201ENST00000526389 112 ntBASIC1.08□□□□□ -2.24
CLDN16Q9Y5I7 MIR4781-201ENST00000585250 76 ntBASIC1.08□□□□□ -2.24
CLDN16Q9Y5I7 RNY1P11-201ENST00000363759 113 ntBASIC1.07□□□□□ -2.24
CLDN16Q9Y5I7 RNU1-124P-201ENST00000363861 145 ntBASIC1.07□□□□□ -2.24
CLDN16Q9Y5I7 RNU6-690P-201ENST00000365242 106 ntBASIC1.07□□□□□ -2.24
CLDN16Q9Y5I7 Y_RNA.400-201ENST00000383963 111 ntBASIC1.07□□□□□ -2.24
CLDN16Q9Y5I7 MT-TN-201ENST00000387400 73 ntBASIC1.07□□□□□ -2.24
CLDN16Q9Y5I7 MT-TR-201ENST00000387439 65 ntBASIC1.07□□□□□ -2.24
CLDN16Q9Y5I7 AC244023.1-201ENST00000426884 112 ntBASIC1.07□□□□□ -2.24
CLDN16Q9Y5I7 OR2A41P-201ENST00000473586 105 ntBASIC1.07□□□□□ -2.24
CLDN16Q9Y5I7 Y_RNA.690-201ENST00000516603 95 ntBASIC1.07□□□□□ -2.24
CLDN16Q9Y5I7 MIR548X2-201ENST00000579776 100 ntBASIC1.07□□□□□ -2.24
CLDN16Q9Y5I7 AC242498.1-201ENST00000604134 111 ntBASIC1.07□□□□□ -2.24
CLDN16Q9Y5I7 RNU6-94P-201ENST00000607728 107 ntBASIC1.07□□□□□ -2.24
CLDN16Q9Y5I7 AC106800.4-201ENST00000614905 153 ntBASIC1.07□□□□□ -2.24
CLDN16Q9Y5I7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CLDN16Q9Y5I7 Y_RNA.215-201ENST00000364204 112 ntBASIC1.06□□□□□ -2.24
CLDN16Q9Y5I7 RNU6-460P-201ENST00000391158 108 ntBASIC1.06□□□□□ -2.24
CLDN16Q9Y5I7 SNORA26.6-201ENST00000391256 115 ntBASIC1.06□□□□□ -2.24
CLDN16Q9Y5I7 MIR942-201ENST00000401111 86 ntBASIC1.06□□□□□ -2.24
CLDN16Q9Y5I7 AC067940.1-201ENST00000458411 300 ntBASIC1.06□□□□□ -2.24
CLDN16Q9Y5I7 RNU6-893P-201ENST00000458841 100 ntBASIC1.06□□□□□ -2.24
CLDN16Q9Y5I7 RNU7-62P-201ENST00000458856 62 ntBASIC1.06□□□□□ -2.24
CLDN16Q9Y5I7 SNORD124-201ENST00000459577 104 ntBASIC1.06□□□□□ -2.24
CLDN16Q9Y5I7 RNA5SP236-201ENST00000516169 116 ntBASIC1.06□□□□□ -2.24
CLDN16Q9Y5I7 Y_RNA.686-201ENST00000516548 134 ntBASIC1.06□□□□□ -2.24
CLDN16Q9Y5I7 MIR4661-201ENST00000582720 75 ntBASIC1.06□□□□□ -2.24
CLDN16Q9Y5I7 SNORA22.1-201ENST00000362701 134 ntBASIC1.05□□□□□ -2.24
CLDN16Q9Y5I7 Y_RNA.120-201ENST00000363304 110 ntBASIC1.05□□□□□ -2.24
CLDN16Q9Y5I7 Y_RNA.168-201ENST00000363740 102 ntBASIC1.05□□□□□ -2.24
CLDN16Q9Y5I7 MIR19B1-201ENST00000384829 87 ntBASIC1.05□□□□□ -2.24
CLDN16Q9Y5I7 MIR588-201ENST00000384900 83 ntBASIC1.05□□□□□ -2.24
CLDN16Q9Y5I7 SNORD12C-201ENST00000386307 89 ntBASIC1.05□□□□□ -2.24
CLDN16Q9Y5I7 MIR6078-201ENST00000611069 100 ntBASIC1.05□□□□□ -2.24
CLDN16Q9Y5I7 MIR377-201ENST00000362145 69 ntBASIC1.04□□□□□ -2.24
CLDN16Q9Y5I7 Y_RNA.4-201ENST00000362333 112 ntBASIC1.04□□□□□ -2.24
CLDN16Q9Y5I7 Y_RNA.251-201ENST00000364551 99 ntBASIC1.04□□□□□ -2.24
CLDN16Q9Y5I7 Y_RNA.488-201ENST00000384403 102 ntBASIC1.04□□□□□ -2.24
CLDN16Q9Y5I7 RNU6-1237P-201ENST00000384777 107 ntBASIC1.04□□□□□ -2.24
CLDN16Q9Y5I7 MIR200A-201ENST00000384875 90 ntBASIC1.04□□□□□ -2.24
CLDN16Q9Y5I7 RNU2-60P-201ENST00000517290 128 ntBASIC1.04□□□□□ -2.24
CLDN16Q9Y5I7 RNY1P10-201ENST00000363268 113 ntBASIC1.03□□□□□ -2.24
CLDN16Q9Y5I7 Y_RNA.170-201ENST00000363746 110 ntBASIC1.03□□□□□ -2.24
CLDN16Q9Y5I7 RNU6-309P-201ENST00000364573 106 ntBASIC1.03□□□□□ -2.24
CLDN16Q9Y5I7 RNU6-915P-201ENST00000364943 103 ntBASIC1.03□□□□□ -2.24
CLDN16Q9Y5I7 SNORD114-24-201ENST00000365029 72 ntBASIC1.03□□□□□ -2.24
CLDN16Q9Y5I7 Y_RNA.430-201ENST00000384081 110 ntBASIC1.03□□□□□ -2.24
CLDN16Q9Y5I7 AL603914.1-201ENST00000401964 204 ntBASIC1.03□□□□□ -2.24
CLDN16Q9Y5I7 RNU6-240P-201ENST00000516098 97 ntBASIC1.03□□□□□ -2.24
CLDN16Q9Y5I7 AC011603.4-201ENST00000611325 277 ntBASIC1.03□□□□□ -2.24
CLDN16Q9Y5I7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.03□□□□□ -2.24
CLDN16Q9Y5I7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CLDN16Q9Y5I7 RNU6-349P-201ENST00000362402 107 ntBASIC1.02□□□□□ -2.25
CLDN16Q9Y5I7 MIR548I1-201ENST00000408810 149 ntBASIC1.02□□□□□ -2.25
CLDN16Q9Y5I7 RNA5SP237-201ENST00000410414 113 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms