Protein–RNA interactions for Protein: Q9UMS5

PHTF1, Putative homeodomain transcription factor 1, humanhuman

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1Q9UMS5 RNU1-124P-201ENST00000363861 145 ntBASIC1.35□□□□□ -2.19
PHTF1Q9UMS5 Y_RNA.363-201ENST00000365529 113 ntBASIC1.35□□□□□ -2.19
PHTF1Q9UMS5 SNORA40.5-201ENST00000391061 128 ntBASIC1.35□□□□□ -2.19
PHTF1Q9UMS5 MIR548M-201ENST00000408260 86 ntBASIC1.35□□□□□ -2.19
PHTF1Q9UMS5 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.35□□□□□ -2.19
PHTF1Q9UMS5 MRPL35P3-201ENST00000421557 364 ntBASIC1.35□□□□□ -2.19
PHTF1Q9UMS5 RNU7-21P-201ENST00000459430 62 ntBASIC1.35□□□□□ -2.19
PHTF1Q9UMS5 RPS26P48-201ENST00000491713 339 ntBASIC1.35□□□□□ -2.19
PHTF1Q9UMS5 AC131055.1-201ENST00000584626 316 ntBASIC1.35□□□□□ -2.19
PHTF1Q9UMS5 AC243994.1-201ENST00000618627 109 ntBASIC1.35□□□□□ -2.19
PHTF1Q9UMS5 RNA5SP325-201ENST00000363756 130 ntBASIC1.34□□□□□ -2.19
PHTF1Q9UMS5 Y_RNA.440-201ENST00000384120 114 ntBASIC1.34□□□□□ -2.19
PHTF1Q9UMS5 MIR19B1-201ENST00000384829 87 ntBASIC1.34□□□□□ -2.19
PHTF1Q9UMS5 MIR569-201ENST00000385228 96 ntBASIC1.34□□□□□ -2.19
PHTF1Q9UMS5 RPS29P29-201ENST00000456396 171 ntBASIC1.34□□□□□ -2.19
PHTF1Q9UMS5 Y_RNA.703-201ENST00000516846 111 ntBASIC1.34□□□□□ -2.19
PHTF1Q9UMS5 SCARNA15-202ENST00000516881 127 ntBASIC1.34□□□□□ -2.19
PHTF1Q9UMS5 MIR5197-201ENST00000583721 112 ntBASIC1.34□□□□□ -2.19
PHTF1Q9UMS5 SEPT14P17-201ENST00000617978 177 ntBASIC1.34□□□□□ -2.19
PHTF1Q9UMS5 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.33□□□□□ -2.2
PHTF1Q9UMS5 Y_RNA.488-201ENST00000384403 102 ntBASIC1.33□□□□□ -2.2
PHTF1Q9UMS5 MIR570-201ENST00000384917 97 ntBASIC1.33□□□□□ -2.2
PHTF1Q9UMS5 SNORA75.2-201ENST00000391138 150 ntBASIC1.33□□□□□ -2.2
PHTF1Q9UMS5 SNORA75.3-201ENST00000391231 150 ntBASIC1.33□□□□□ -2.2
PHTF1Q9UMS5 AL603908.1-201ENST00000406098 201 ntBASIC1.33□□□□□ -2.2
PHTF1Q9UMS5 AC002429.1-201ENST00000437672 148 ntBASIC1.33□□□□□ -2.2
PHTF1Q9UMS5 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.33□□□□□ -2.2
PHTF1Q9UMS5 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.33□□□□□ -2.2
PHTF1Q9UMS5 AC090821.2-201ENST00000523552 176 ntBASIC1.33□□□□□ -2.2
PHTF1Q9UMS5 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.33□□□□□ -2.2
PHTF1Q9UMS5 AC008163.1-202ENST00000636004 2889 ntBASIC1.32□□□□□ -2.2
PHTF1Q9UMS5 MIR513C-201ENST00000401352 84 ntBASIC1.32□□□□□ -2.2
PHTF1Q9UMS5 MIR1185-1-201ENST00000408598 86 ntBASIC1.32□□□□□ -2.2
PHTF1Q9UMS5 RNU7-67P-201ENST00000459003 62 ntBASIC1.32□□□□□ -2.2
PHTF1Q9UMS5 snoU13.16-201ENST00000459350 104 ntBASIC1.32□□□□□ -2.2
PHTF1Q9UMS5 RPS23P4-201ENST00000487908 423 ntBASIC1.32□□□□□ -2.2
PHTF1Q9UMS5 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
PHTF1Q9UMS5 Y_RNA.52-201ENST00000362760 96 ntBASIC1.31□□□□□ -2.2
PHTF1Q9UMS5 Y_RNA.330-201ENST00000365230 109 ntBASIC1.31□□□□□ -2.2
PHTF1Q9UMS5 SNORD50.2-201ENST00000365465 70 ntBASIC1.31□□□□□ -2.2
PHTF1Q9UMS5 SNORA24-201ENST00000384096 131 ntBASIC1.31□□□□□ -2.2
PHTF1Q9UMS5 RNU6-187P-201ENST00000384139 106 ntBASIC1.31□□□□□ -2.2
PHTF1Q9UMS5 SNORA27-201ENST00000384323 126 ntBASIC1.31□□□□□ -2.2
PHTF1Q9UMS5 Y_RNA.568-201ENST00000384742 113 ntBASIC1.31□□□□□ -2.2
PHTF1Q9UMS5 MIR200A-201ENST00000384875 90 ntBASIC1.31□□□□□ -2.2
PHTF1Q9UMS5 Y_RNA.584-201ENST00000391090 114 ntBASIC1.31□□□□□ -2.2
PHTF1Q9UMS5 AL392103.1-201ENST00000447000 198 ntBASIC1.31□□□□□ -2.2
PHTF1Q9UMS5 MIR2115-201ENST00000516657 100 ntBASIC1.31□□□□□ -2.2
PHTF1Q9UMS5 RNU2-60P-201ENST00000517290 128 ntBASIC1.31□□□□□ -2.2
PHTF1Q9UMS5 MIR151B-201ENST00000584249 96 ntBASIC1.31□□□□□ -2.2
PHTF1Q9UMS5 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.31□□□□□ -2.2
PHTF1Q9UMS5 AP001340.1-201ENST00000624405 217 ntBASIC1.31□□□□□ -2.2
PHTF1Q9UMS5 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
PHTF1Q9UMS5 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
PHTF1Q9UMS5 MTND5P32-201ENST00000560711 1802 ntBASIC1.31□□□□□ -2.2
PHTF1Q9UMS5 RNU6-396P-201ENST00000365369 105 ntBASIC1.3□□□□□ -2.2
PHTF1Q9UMS5 SNORA40.6-201ENST00000391153 128 ntBASIC1.3□□□□□ -2.2
PHTF1Q9UMS5 SNORA25.12-201ENST00000516202 82 ntBASIC1.3□□□□□ -2.2
PHTF1Q9UMS5 RNU7-53P-201ENST00000516705 60 ntBASIC1.3□□□□□ -2.2
PHTF1Q9UMS5 RNU6-1149P-201ENST00000516810 97 ntBASIC1.3□□□□□ -2.2
PHTF1Q9UMS5 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.3□□□□□ -2.2
PHTF1Q9UMS5 MIR3660-201ENST00000584845 100 ntBASIC1.3□□□□□ -2.2
PHTF1Q9UMS5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
PHTF1Q9UMS5 Y_RNA.120-201ENST00000363304 110 ntBASIC1.29□□□□□ -2.2
PHTF1Q9UMS5 Y_RNA.343-201ENST00000365354 112 ntBASIC1.29□□□□□ -2.2
PHTF1Q9UMS5 Y_RNA.351-201ENST00000365436 96 ntBASIC1.29□□□□□ -2.2
PHTF1Q9UMS5 RNU6-460P-201ENST00000391158 108 ntBASIC1.29□□□□□ -2.2
PHTF1Q9UMS5 AC004223.1-201ENST00000479840 271 ntBASIC1.29□□□□□ -2.2
PHTF1Q9UMS5 RPS29P24-201ENST00000486345 171 ntBASIC1.29□□□□□ -2.2
PHTF1Q9UMS5 RNA5SP272-201ENST00000516095 111 ntBASIC1.29□□□□□ -2.2
PHTF1Q9UMS5 RNA5SP236-201ENST00000516169 116 ntBASIC1.29□□□□□ -2.2
PHTF1Q9UMS5 RNU6-426P-201ENST00000516464 97 ntBASIC1.29□□□□□ -2.2
PHTF1Q9UMS5 RNU6-704P-201ENST00000364162 103 ntBASIC1.28□□□□□ -2.2
PHTF1Q9UMS5 Y_RNA.354-201ENST00000365448 111 ntBASIC1.28□□□□□ -2.2
PHTF1Q9UMS5 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.28□□□□□ -2.2
PHTF1Q9UMS5 RNU7-80P-201ENST00000459562 61 ntBASIC1.28□□□□□ -2.2
PHTF1Q9UMS5 RNU6-998P-201ENST00000515894 101 ntBASIC1.28□□□□□ -2.2
PHTF1Q9UMS5 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.28□□□□□ -2.21
PHTF1Q9UMS5 AC010332.2-201ENST00000613083 1904 ntBASIC1.27□□□□□ -2.21
PHTF1Q9UMS5 SNORD114-24-201ENST00000365029 72 ntBASIC1.27□□□□□ -2.21
PHTF1Q9UMS5 Y_RNA.420-201ENST00000384043 110 ntBASIC1.27□□□□□ -2.21
PHTF1Q9UMS5 AL603914.1-201ENST00000401964 204 ntBASIC1.27□□□□□ -2.21
PHTF1Q9UMS5 AL035398.1-201ENST00000430869 322 ntBASIC1.27□□□□□ -2.21
PHTF1Q9UMS5 RNU7-73P-201ENST00000458743 63 ntBASIC1.27□□□□□ -2.21
PHTF1Q9UMS5 RNU7-96P-201ENST00000459535 64 ntBASIC1.27□□□□□ -2.21
PHTF1Q9UMS5 RN7SKP179-201ENST00000516126 217 ntBASIC1.27□□□□□ -2.21
PHTF1Q9UMS5 Y_RNA.686-201ENST00000516548 134 ntBASIC1.27□□□□□ -2.21
PHTF1Q9UMS5 RNU6-958P-201ENST00000516995 106 ntBASIC1.27□□□□□ -2.21
PHTF1Q9UMS5 MIR6788-201ENST00000618842 66 ntBASIC1.27□□□□□ -2.21
PHTF1Q9UMS5 AC012676.2-201ENST00000619258 186 ntBASIC1.27□□□□□ -2.21
PHTF1Q9UMS5 PVT1_3.1-201ENST00000620853 95 ntBASIC1.27□□□□□ -2.21
PHTF1Q9UMS5 RNU6-309P-201ENST00000364573 106 ntBASIC1.26□□□□□ -2.21
PHTF1Q9UMS5 SNORD18B-201ENST00000365659 72 ntBASIC1.26□□□□□ -2.21
PHTF1Q9UMS5 SNORA20-201ENST00000384662 132 ntBASIC1.26□□□□□ -2.21
PHTF1Q9UMS5 RNU6-257P-201ENST00000410238 98 ntBASIC1.26□□□□□ -2.21
PHTF1Q9UMS5 MIR3121-201ENST00000579680 77 ntBASIC1.26□□□□□ -2.21
PHTF1Q9UMS5 MIR548AO-201ENST00000579992 96 ntBASIC1.26□□□□□ -2.21
PHTF1Q9UMS5 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.26□□□□□ -2.21
PHTF1Q9UMS5 RNU6-508P-201ENST00000363231 103 ntBASIC1.25□□□□□ -2.21
PHTF1Q9UMS5 RNU6-53P-201ENST00000365367 106 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 214.5 ms