Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 RNU7-96P-201ENST00000459535 64 ntBASIC1.11□□□□□ -2.23
SHROOM4Q9ULL8 AC011195.1-201ENST00000578177 177 ntBASIC1.11□□□□□ -2.23
SHROOM4Q9ULL8 AC243829.6-201ENST00000612652 106 ntBASIC1.11□□□□□ -2.23
SHROOM4Q9ULL8 Y_RNA.47-201ENST00000362697 108 ntBASIC1.1□□□□□ -2.23
SHROOM4Q9ULL8 Y_RNA.60-201ENST00000362831 98 ntBASIC1.1□□□□□ -2.23
SHROOM4Q9ULL8 SNORD45.3-201ENST00000363836 72 ntBASIC1.1□□□□□ -2.23
SHROOM4Q9ULL8 snoU2_19.4-201ENST00000364329 80 ntBASIC1.1□□□□□ -2.23
SHROOM4Q9ULL8 SNORA1.1-201ENST00000364671 133 ntBASIC1.1□□□□□ -2.23
SHROOM4Q9ULL8 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.1□□□□□ -2.23
SHROOM4Q9ULL8 RNU2-11P-201ENST00000459191 187 ntBASIC1.1□□□□□ -2.23
SHROOM4Q9ULL8 Z97988.1-201ENST00000637697 135 ntBASIC1.1□□□□□ -2.23
SHROOM4Q9ULL8 AC090844.1-201ENST00000422019 156 ntBASIC1.09□□□□□ -2.24
SHROOM4Q9ULL8 COX6CP6-201ENST00000490840 228 ntBASIC1.09□□□□□ -2.24
SHROOM4Q9ULL8 AL117187.1-201ENST00000555482 181 ntBASIC1.09□□□□□ -2.24
SHROOM4Q9ULL8 Y_RNA.7-201ENST00000362352 102 ntBASIC1.08□□□□□ -2.24
SHROOM4Q9ULL8 Y_RNA.91-201ENST00000363042 107 ntBASIC1.08□□□□□ -2.24
SHROOM4Q9ULL8 Y_RNA.351-201ENST00000365436 96 ntBASIC1.08□□□□□ -2.24
SHROOM4Q9ULL8 RNU6-738P-201ENST00000384531 106 ntBASIC1.08□□□□□ -2.24
SHROOM4Q9ULL8 RNU6-913P-201ENST00000390913 95 ntBASIC1.08□□□□□ -2.24
SHROOM4Q9ULL8 RNA5SP63-201ENST00000391225 112 ntBASIC1.08□□□□□ -2.24
SHROOM4Q9ULL8 Y_RNA.54-201ENST00000362766 105 ntBASIC1.07□□□□□ -2.24
SHROOM4Q9ULL8 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
SHROOM4Q9ULL8 Y_RNA.618-201ENST00000410949 107 ntBASIC1.07□□□□□ -2.24
SHROOM4Q9ULL8 MIR18B-201ENST00000454574 71 ntBASIC1.07□□□□□ -2.24
SHROOM4Q9ULL8 RNU7-62P-201ENST00000458856 62 ntBASIC1.07□□□□□ -2.24
SHROOM4Q9ULL8 Y_RNA.149-201ENST00000363558 117 ntBASIC1.06□□□□□ -2.24
SHROOM4Q9ULL8 RNU6-103P-201ENST00000363686 107 ntBASIC1.06□□□□□ -2.24
SHROOM4Q9ULL8 MIR548F4-201ENST00000408515 105 ntBASIC1.06□□□□□ -2.24
SHROOM4Q9ULL8 RNU6-998P-201ENST00000515894 101 ntBASIC1.06□□□□□ -2.24
SHROOM4Q9ULL8 RNA5SP285-201ENST00000516619 119 ntBASIC1.06□□□□□ -2.24
SHROOM4Q9ULL8 MIR342-201ENST00000362212 99 ntBASIC1.05□□□□□ -2.24
SHROOM4Q9ULL8 RNU6-1309P-201ENST00000363305 108 ntBASIC1.05□□□□□ -2.24
SHROOM4Q9ULL8 Y_RNA.518-201ENST00000384552 113 ntBASIC1.05□□□□□ -2.24
SHROOM4Q9ULL8 RNA5SP261-201ENST00000410536 106 ntBASIC1.05□□□□□ -2.24
SHROOM4Q9ULL8 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.05□□□□□ -2.24
SHROOM4Q9ULL8 AC244098.3-201ENST00000424803 96 ntBASIC1.05□□□□□ -2.24
SHROOM4Q9ULL8 RNU7-80P-201ENST00000459562 61 ntBASIC1.05□□□□□ -2.24
SHROOM4Q9ULL8 AC097639.2-201ENST00000603159 172 ntBASIC1.05□□□□□ -2.24
SHROOM4Q9ULL8 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.05□□□□□ -2.24
SHROOM4Q9ULL8 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SHROOM4Q9ULL8 Y_RNA.277-201ENST00000364754 102 ntBASIC1.05□□□□□ -2.24
SHROOM4Q9ULL8 Y_RNA.292-201ENST00000364904 97 ntBASIC1.05□□□□□ -2.24
SHROOM4Q9ULL8 RNU6-472P-201ENST00000384299 107 ntBASIC1.05□□□□□ -2.24
SHROOM4Q9ULL8 MIR520F-201ENST00000384824 87 ntBASIC1.05□□□□□ -2.24
SHROOM4Q9ULL8 SNORD83.1-201ENST00000411362 77 ntBASIC1.05□□□□□ -2.24
SHROOM4Q9ULL8 snoU13.21-201ENST00000459368 105 ntBASIC1.05□□□□□ -2.24
SHROOM4Q9ULL8 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SHROOM4Q9ULL8 MIR1265-201ENST00000408444 86 ntBASIC1.04□□□□□ -2.24
SHROOM4Q9ULL8 RNU6-602P-201ENST00000411155 105 ntBASIC1.04□□□□□ -2.24
SHROOM4Q9ULL8 AL138752.1-201ENST00000452964 351 ntBASIC1.04□□□□□ -2.24
SHROOM4Q9ULL8 MIR4771-2-201ENST00000577758 74 ntBASIC1.04□□□□□ -2.24
SHROOM4Q9ULL8 MIR4771-1-201ENST00000582617 74 ntBASIC1.04□□□□□ -2.24
SHROOM4Q9ULL8 Z83818.1-201ENST00000603584 150 ntBASIC1.04□□□□□ -2.24
SHROOM4Q9ULL8 Y_RNA.440-201ENST00000384120 114 ntBASIC1.03□□□□□ -2.24
SHROOM4Q9ULL8 RNU6-381P-201ENST00000391259 108 ntBASIC1.03□□□□□ -2.24
SHROOM4Q9ULL8 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.03□□□□□ -2.24
SHROOM4Q9ULL8 MIR3152-201ENST00000579801 74 ntBASIC1.03□□□□□ -2.24
SHROOM4Q9ULL8 AL442067.1-201ENST00000613261 223 ntBASIC1.03□□□□□ -2.24
SHROOM4Q9ULL8 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
SHROOM4Q9ULL8 RNU6-653P-201ENST00000363074 106 ntBASIC1.02□□□□□ -2.25
SHROOM4Q9ULL8 Y_RNA.288-201ENST00000364854 92 ntBASIC1.02□□□□□ -2.25
SHROOM4Q9ULL8 RNU4-17P-201ENST00000365598 141 ntBASIC1.02□□□□□ -2.25
SHROOM4Q9ULL8 Y_RNA.542-201ENST00000384641 111 ntBASIC1.02□□□□□ -2.25
SHROOM4Q9ULL8 RNA5SP222-201ENST00000411039 105 ntBASIC1.02□□□□□ -2.25
SHROOM4Q9ULL8 SNORD127-201ENST00000458892 86 ntBASIC1.02□□□□□ -2.25
SHROOM4Q9ULL8 MIR4744-201ENST00000581563 82 ntBASIC1.02□□□□□ -2.25
SHROOM4Q9ULL8 SNORA1-201ENST00000384107 130 ntBASIC1.01□□□□□ -2.25
SHROOM4Q9ULL8 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.01□□□□□ -2.25
SHROOM4Q9ULL8 snoU13.2-201ENST00000459201 104 ntBASIC1.01□□□□□ -2.25
SHROOM4Q9ULL8 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.01□□□□□ -2.25
SHROOM4Q9ULL8 MIR4643-201ENST00000577473 78 ntBASIC1.01□□□□□ -2.25
SHROOM4Q9ULL8 Y_RNA.396-201ENST00000383949 103 ntBASIC1□□□□□ -2.25
SHROOM4Q9ULL8 Y_RNA.556-201ENST00000384677 113 ntBASIC1□□□□□ -2.25
SHROOM4Q9ULL8 MIR588-201ENST00000384900 83 ntBASIC1□□□□□ -2.25
SHROOM4Q9ULL8 MIR548I3-201ENST00000408378 149 ntBASIC1□□□□□ -2.25
SHROOM4Q9ULL8 MIR6759-201ENST00000638110 65 ntBASIC1□□□□□ -2.25
SHROOM4Q9ULL8 Y_RNA.454-201ENST00000384224 113 ntBASIC0.99□□□□□ -2.25
SHROOM4Q9ULL8 MIR548H3-201ENST00000408771 118 ntBASIC0.99□□□□□ -2.25
SHROOM4Q9ULL8 AC018659.1-201ENST00000551083 169 ntBASIC0.99□□□□□ -2.25
SHROOM4Q9ULL8 MIR4804-201ENST00000581683 73 ntBASIC0.99□□□□□ -2.25
SHROOM4Q9ULL8 Y_RNA.23-201ENST00000362496 106 ntBASIC0.99□□□□□ -2.25
SHROOM4Q9ULL8 RNU6-1292P-201ENST00000383856 107 ntBASIC0.99□□□□□ -2.25
SHROOM4Q9ULL8 MIR520H-201ENST00000385126 88 ntBASIC0.99□□□□□ -2.25
SHROOM4Q9ULL8 MIR1302-3-201ENST00000408128 138 ntBASIC0.99□□□□□ -2.25
SHROOM4Q9ULL8 AL121914.1-201ENST00000450188 156 ntBASIC0.99□□□□□ -2.25
SHROOM4Q9ULL8 AC004817.2-201ENST00000561794 651 ntBASIC0.99□□□□□ -2.25
SHROOM4Q9ULL8 RNU7-56P-201ENST00000458744 62 ntBASIC0.98□□□□□ -2.25
SHROOM4Q9ULL8 RNU6-561P-201ENST00000516222 102 ntBASIC0.98□□□□□ -2.25
SHROOM4Q9ULL8 SNORA62.5-201ENST00000516634 120 ntBASIC0.98□□□□□ -2.25
SHROOM4Q9ULL8 MIR3129-201ENST00000581095 76 ntBASIC0.98□□□□□ -2.25
SHROOM4Q9ULL8 MIR4676-201ENST00000583078 72 ntBASIC0.98□□□□□ -2.25
SHROOM4Q9ULL8 RNU6-369P-201ENST00000362515 102 ntBASIC0.97□□□□□ -2.25
SHROOM4Q9ULL8 RNU6-694P-201ENST00000364071 147 ntBASIC0.97□□□□□ -2.25
SHROOM4Q9ULL8 MIR92A1-201ENST00000385233 78 ntBASIC0.97□□□□□ -2.25
SHROOM4Q9ULL8 RNU4-43P-201ENST00000410628 137 ntBASIC0.97□□□□□ -2.25
SHROOM4Q9ULL8 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.97□□□□□ -2.25
SHROOM4Q9ULL8 SNORA36.2-201ENST00000384004 127 ntBASIC0.96□□□□□ -2.26
SHROOM4Q9ULL8 MIR938-201ENST00000401216 83 ntBASIC0.96□□□□□ -2.26
SHROOM4Q9ULL8 RNU7-70P-201ENST00000516941 66 ntBASIC0.96□□□□□ -2.26
SHROOM4Q9ULL8 MIR5087-201ENST00000635826 76 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms