Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.25□□□□□ -2.61
VPS29Q9UBQ0 SPINT5P-201ENST00000448174 155 ntBASIC-1.25□□□□□ -2.61
VPS29Q9UBQ0 SNORD38.3-201ENST00000516599 73 ntBASIC-1.25□□□□□ -2.61
VPS29Q9UBQ0 SNORA27.4-201ENST00000516650 95 ntBASIC-1.25□□□□□ -2.61
VPS29Q9UBQ0 MIR3611-201ENST00000584484 83 ntBASIC-1.25□□□□□ -2.61
VPS29Q9UBQ0 RNU6-86P-201ENST00000606534 107 ntBASIC-1.25□□□□□ -2.61
VPS29Q9UBQ0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.25□□□□□ -2.61
VPS29Q9UBQ0 RNU4-80P-201ENST00000363200 141 ntBASIC-1.26□□□□□ -2.61
VPS29Q9UBQ0 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.26□□□□□ -2.61
VPS29Q9UBQ0 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.26□□□□□ -2.61
VPS29Q9UBQ0 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.26□□□□□ -2.61
VPS29Q9UBQ0 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.26□□□□□ -2.61
VPS29Q9UBQ0 Y_RNA.605-201ENST00000410577 105 ntBASIC-1.26□□□□□ -2.61
VPS29Q9UBQ0 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.26□□□□□ -2.61
VPS29Q9UBQ0 AP003733.2-201ENST00000529409 171 ntBASIC-1.26□□□□□ -2.61
VPS29Q9UBQ0 MIR548H5-201ENST00000580314 60 ntBASIC-1.26□□□□□ -2.61
VPS29Q9UBQ0 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.27□□□□□ -2.61
VPS29Q9UBQ0 RNY3P11-201ENST00000364153 102 ntBASIC-1.27□□□□□ -2.61
VPS29Q9UBQ0 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.27□□□□□ -2.61
VPS29Q9UBQ0 SNORD114-29-201ENST00000364819 70 ntBASIC-1.27□□□□□ -2.61
VPS29Q9UBQ0 MIR539-201ENST00000365690 78 ntBASIC-1.27□□□□□ -2.61
VPS29Q9UBQ0 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.27□□□□□ -2.61
VPS29Q9UBQ0 RNU7-80P-201ENST00000459562 61 ntBASIC-1.27□□□□□ -2.61
VPS29Q9UBQ0 RPS29P25-201ENST00000481709 171 ntBASIC-1.27□□□□□ -2.61
VPS29Q9UBQ0 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.27□□□□□ -2.61
VPS29Q9UBQ0 U2.1-201ENST00000618978 145 ntBASIC-1.27□□□□□ -2.61
VPS29Q9UBQ0 MIR367-201ENST00000362299 68 ntBASIC-1.28□□□□□ -2.61
VPS29Q9UBQ0 SNORD114-25-201ENST00000363742 72 ntBASIC-1.28□□□□□ -2.61
VPS29Q9UBQ0 RNU1-141P-201ENST00000364623 158 ntBASIC-1.28□□□□□ -2.61
VPS29Q9UBQ0 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.28□□□□□ -2.61
VPS29Q9UBQ0 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.28□□□□□ -2.61
VPS29Q9UBQ0 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.28□□□□□ -2.61
VPS29Q9UBQ0 AC107399.1-201ENST00000451226 265 ntBASIC-1.28□□□□□ -2.61
VPS29Q9UBQ0 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.28□□□□□ -2.61
VPS29Q9UBQ0 RNU6-120P-201ENST00000516077 103 ntBASIC-1.28□□□□□ -2.61
VPS29Q9UBQ0 AC109635.3-201ENST00000529536 185 ntBASIC-1.28□□□□□ -2.61
VPS29Q9UBQ0 MIR548AX-201ENST00000580117 73 ntBASIC-1.28□□□□□ -2.61
VPS29Q9UBQ0 MIR6851-201ENST00000617060 67 ntBASIC-1.28□□□□□ -2.61
VPS29Q9UBQ0 AC091932.4-201ENST00000623386 200 ntBASIC-1.28□□□□□ -2.61
VPS29Q9UBQ0 RNU6-900P-201ENST00000384498 102 ntBASIC-1.29□□□□□ -2.62
VPS29Q9UBQ0 AL603914.1-201ENST00000401964 204 ntBASIC-1.29□□□□□ -2.62
VPS29Q9UBQ0 RNA5SP25-201ENST00000410815 110 ntBASIC-1.29□□□□□ -2.62
VPS29Q9UBQ0 RNU6-264P-201ENST00000517134 104 ntBASIC-1.29□□□□□ -2.62
VPS29Q9UBQ0 Z99129.1-201ENST00000612510 255 ntBASIC-1.29□□□□□ -2.62
VPS29Q9UBQ0 AC015540.1-201ENST00000615828 501 ntBASIC-1.29□□□□□ -2.62
VPS29Q9UBQ0 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.3□□□□□ -2.62
VPS29Q9UBQ0 RNU6-911P-201ENST00000516523 104 ntBASIC-1.3□□□□□ -2.62
VPS29Q9UBQ0 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.3□□□□□ -2.62
VPS29Q9UBQ0 MIR3920-201ENST00000581751 86 ntBASIC-1.3□□□□□ -2.62
VPS29Q9UBQ0 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.31□□□□□ -2.62
VPS29Q9UBQ0 RNU6-35P-201ENST00000384530 107 ntBASIC-1.31□□□□□ -2.62
VPS29Q9UBQ0 RNU6-21P-201ENST00000384710 107 ntBASIC-1.31□□□□□ -2.62
VPS29Q9UBQ0 MIR599-201ENST00000385069 95 ntBASIC-1.31□□□□□ -2.62
VPS29Q9UBQ0 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.31□□□□□ -2.62
VPS29Q9UBQ0 RNU6-721P-201ENST00000410155 105 ntBASIC-1.31□□□□□ -2.62
VPS29Q9UBQ0 RNU6-397P-201ENST00000516226 104 ntBASIC-1.31□□□□□ -2.62
VPS29Q9UBQ0 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.31□□□□□ -2.62
VPS29Q9UBQ0 AP000676.1-201ENST00000533307 52 ntBASIC-1.31□□□□□ -2.62
VPS29Q9UBQ0 RNU7-10P-201ENST00000607194 63 ntBASIC-1.31□□□□□ -2.62
VPS29Q9UBQ0 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.32□□□□□ -2.62
VPS29Q9UBQ0 Y_RNA.383-201ENST00000383855 97 ntBASIC-1.32□□□□□ -2.62
VPS29Q9UBQ0 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
VPS29Q9UBQ0 MIR1265-201ENST00000408444 86 ntBASIC-1.32□□□□□ -2.62
VPS29Q9UBQ0 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.32□□□□□ -2.62
VPS29Q9UBQ0 SNORA13-201ENST00000458790 133 ntBASIC-1.32□□□□□ -2.62
VPS29Q9UBQ0 RNU7-74P-201ENST00000459104 62 ntBASIC-1.32□□□□□ -2.62
VPS29Q9UBQ0 RNU7-79P-201ENST00000516082 62 ntBASIC-1.32□□□□□ -2.62
VPS29Q9UBQ0 MIR4724-201ENST00000579485 89 ntBASIC-1.32□□□□□ -2.62
VPS29Q9UBQ0 YWHAEP2-201ENST00000580066 112 ntBASIC-1.32□□□□□ -2.62
VPS29Q9UBQ0 MIR548AE1-201ENST00000583292 70 ntBASIC-1.32□□□□□ -2.62
VPS29Q9UBQ0 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
VPS29Q9UBQ0 RN7SKP299-201ENST00000606679 301 ntBASIC-1.32□□□□□ -2.62
VPS29Q9UBQ0 AC021613.1-201ENST00000623880 111 ntBASIC-1.32□□□□□ -2.62
VPS29Q9UBQ0 MTND5P18-201ENST00000445624 1801 ntBASIC-1.33□□□□□ -2.62
VPS29Q9UBQ0 Y_RNA.88-201ENST00000363029 99 ntBASIC-1.33□□□□□ -2.62
VPS29Q9UBQ0 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.33□□□□□ -2.62
VPS29Q9UBQ0 RNY1P2-201ENST00000364820 117 ntBASIC-1.33□□□□□ -2.62
VPS29Q9UBQ0 RNU6-449P-201ENST00000383914 107 ntBASIC-1.33□□□□□ -2.62
VPS29Q9UBQ0 RNU4-70P-201ENST00000384579 139 ntBASIC-1.33□□□□□ -2.62
VPS29Q9UBQ0 RNU6-763P-201ENST00000390865 106 ntBASIC-1.33□□□□□ -2.62
VPS29Q9UBQ0 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.33□□□□□ -2.62
VPS29Q9UBQ0 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.33□□□□□ -2.62
VPS29Q9UBQ0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.33□□□□□ -2.62
VPS29Q9UBQ0 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.33□□□□□ -2.62
VPS29Q9UBQ0 AC069503.3-201ENST00000618674 145 ntBASIC-1.33□□□□□ -2.62
VPS29Q9UBQ0 AL669831.3-213ENST00000636676 183 ntBASIC-1.33□□□□□ -2.62
VPS29Q9UBQ0 RNU6-502P-201ENST00000362419 108 ntBASIC-1.34□□□□□ -2.62
VPS29Q9UBQ0 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.34□□□□□ -2.62
VPS29Q9UBQ0 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.34□□□□□ -2.62
VPS29Q9UBQ0 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.34□□□□□ -2.62
VPS29Q9UBQ0 RNU6-154P-201ENST00000384306 106 ntBASIC-1.34□□□□□ -2.62
VPS29Q9UBQ0 MTCO2P24-201ENST00000515611 426 ntBASIC-1.34□□□□□ -2.62
VPS29Q9UBQ0 MIR3179-1-201ENST00000578940 84 ntBASIC-1.34□□□□□ -2.62
VPS29Q9UBQ0 MIR3179-2-201ENST00000579107 84 ntBASIC-1.34□□□□□ -2.62
VPS29Q9UBQ0 MIR3179-3-201ENST00000579566 84 ntBASIC-1.34□□□□□ -2.62
VPS29Q9UBQ0 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.34□□□□□ -2.62
VPS29Q9UBQ0 MIR3179-4-201ENST00000617599 84 ntBASIC-1.34□□□□□ -2.62
VPS29Q9UBQ0 MIR376A2-201ENST00000636782 80 ntBASIC-1.34□□□□□ -2.62
VPS29Q9UBQ0 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.35□□□□□ -2.63
VPS29Q9UBQ0 SNORD115-44-201ENST00000365391 82 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 218.9 ms