Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 SNORD12C-201ENST00000386307 89 ntBASIC1.92□□□□□ -2.1
PPARGC1AQ9UBK2 MIR934-201ENST00000401241 83 ntBASIC1.92□□□□□ -2.1
PPARGC1AQ9UBK2 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.92□□□□□ -2.1
PPARGC1AQ9UBK2 snoU13.9-201ENST00000458927 103 ntBASIC1.92□□□□□ -2.1
PPARGC1AQ9UBK2 RNU7-113P-201ENST00000459273 62 ntBASIC1.92□□□□□ -2.1
PPARGC1AQ9UBK2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.92□□□□□ -2.1
PPARGC1AQ9UBK2 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
PPARGC1AQ9UBK2 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
PPARGC1AQ9UBK2 MIR548D2-201ENST00000384955 97 ntBASIC1.91□□□□□ -2.1
PPARGC1AQ9UBK2 AL445685.2-201ENST00000422551 342 ntBASIC1.91□□□□□ -2.1
PPARGC1AQ9UBK2 HMGN2P23-201ENST00000456759 269 ntBASIC1.91□□□□□ -2.1
PPARGC1AQ9UBK2 RNU7-45P-201ENST00000459460 63 ntBASIC1.91□□□□□ -2.1
PPARGC1AQ9UBK2 RPL39P34-201ENST00000477141 156 ntBASIC1.91□□□□□ -2.1
PPARGC1AQ9UBK2 AC113410.1-201ENST00000505029 247 ntBASIC1.91□□□□□ -2.1
PPARGC1AQ9UBK2 MIR7843-201ENST00000622274 79 ntBASIC1.91□□□□□ -2.1
PPARGC1AQ9UBK2 MIR4251-201ENST00000635819 61 ntBASIC1.91□□□□□ -2.1
PPARGC1AQ9UBK2 MIR302D-201ENST00000362275 68 ntBASIC1.9□□□□□ -2.11
PPARGC1AQ9UBK2 Y_RNA.362-201ENST00000365518 110 ntBASIC1.9□□□□□ -2.11
PPARGC1AQ9UBK2 RNU6-1104P-201ENST00000384723 104 ntBASIC1.9□□□□□ -2.11
PPARGC1AQ9UBK2 AL512326.2-201ENST00000426359 151 ntBASIC1.9□□□□□ -2.11
PPARGC1AQ9UBK2 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
PPARGC1AQ9UBK2 RNU6-1107P-201ENST00000364817 104 ntBASIC1.89□□□□□ -2.11
PPARGC1AQ9UBK2 MIR583-201ENST00000384846 75 ntBASIC1.89□□□□□ -2.11
PPARGC1AQ9UBK2 MT-TI-201ENST00000387365 69 ntBASIC1.89□□□□□ -2.11
PPARGC1AQ9UBK2 RNU4-69P-201ENST00000410677 143 ntBASIC1.89□□□□□ -2.11
PPARGC1AQ9UBK2 HSPE1P24-201ENST00000450782 238 ntBASIC1.89□□□□□ -2.11
PPARGC1AQ9UBK2 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.89□□□□□ -2.11
PPARGC1AQ9UBK2 AC022523.2-201ENST00000561045 150 ntBASIC1.89□□□□□ -2.11
PPARGC1AQ9UBK2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.89□□□□□ -2.11
PPARGC1AQ9UBK2 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.89□□□□□ -2.11
PPARGC1AQ9UBK2 RNU6-94P-201ENST00000607728 107 ntBASIC1.89□□□□□ -2.11
PPARGC1AQ9UBK2 SNORD115-19-201ENST00000363098 82 ntBASIC1.88□□□□□ -2.11
PPARGC1AQ9UBK2 SNORD115-18-201ENST00000363293 82 ntBASIC1.88□□□□□ -2.11
PPARGC1AQ9UBK2 SNORD115-17-201ENST00000364612 82 ntBASIC1.88□□□□□ -2.11
PPARGC1AQ9UBK2 Y_RNA.323-201ENST00000365157 109 ntBASIC1.88□□□□□ -2.11
PPARGC1AQ9UBK2 RNU6-1190P-201ENST00000410811 104 ntBASIC1.88□□□□□ -2.11
PPARGC1AQ9UBK2 RNU7-41P-201ENST00000515917 61 ntBASIC1.88□□□□□ -2.11
PPARGC1AQ9UBK2 RNU6-922P-201ENST00000516753 99 ntBASIC1.88□□□□□ -2.11
PPARGC1AQ9UBK2 CYP3A52P-201ENST00000563326 91 ntBASIC1.88□□□□□ -2.11
PPARGC1AQ9UBK2 SNORA63.4-201ENST00000362763 126 ntBASIC1.87□□□□□ -2.11
PPARGC1AQ9UBK2 SNORA16.1-201ENST00000364597 132 ntBASIC1.87□□□□□ -2.11
PPARGC1AQ9UBK2 MIR9-3-201ENST00000385084 90 ntBASIC1.87□□□□□ -2.11
PPARGC1AQ9UBK2 MIR1289-2-201ENST00000408360 111 ntBASIC1.87□□□□□ -2.11
PPARGC1AQ9UBK2 AC003989.2-201ENST00000440224 169 ntBASIC1.87□□□□□ -2.11
PPARGC1AQ9UBK2 RPL39P39-201ENST00000455840 151 ntBASIC1.87□□□□□ -2.11
PPARGC1AQ9UBK2 RPL30P7-201ENST00000479312 323 ntBASIC1.87□□□□□ -2.11
PPARGC1AQ9UBK2 RNU6-295P-201ENST00000516901 104 ntBASIC1.87□□□□□ -2.11
PPARGC1AQ9UBK2 RNU6-1258P-201ENST00000516911 111 ntBASIC1.87□□□□□ -2.11
PPARGC1AQ9UBK2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.87□□□□□ -2.11
PPARGC1AQ9UBK2 MIR6845-201ENST00000613182 61 ntBASIC1.87□□□□□ -2.11
PPARGC1AQ9UBK2 AL035470.1-201ENST00000622571 220 ntBASIC1.87□□□□□ -2.11
PPARGC1AQ9UBK2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
PPARGC1AQ9UBK2 AL391516.1-201ENST00000554380 2449 ntBASIC1.86□□□□□ -2.11
PPARGC1AQ9UBK2 Y_RNA.171-201ENST00000363760 102 ntBASIC1.86□□□□□ -2.11
PPARGC1AQ9UBK2 Y_RNA.309-201ENST00000365046 111 ntBASIC1.86□□□□□ -2.11
PPARGC1AQ9UBK2 SNORA40.18-201ENST00000391200 128 ntBASIC1.86□□□□□ -2.11
PPARGC1AQ9UBK2 SNORA26.9-201ENST00000391322 122 ntBASIC1.86□□□□□ -2.11
PPARGC1AQ9UBK2 RPS29P11-201ENST00000496507 171 ntBASIC1.86□□□□□ -2.11
PPARGC1AQ9UBK2 MIR548AO-201ENST00000579992 96 ntBASIC1.86□□□□□ -2.11
PPARGC1AQ9UBK2 MIR4285-201ENST00000581001 85 ntBASIC1.86□□□□□ -2.11
PPARGC1AQ9UBK2 MIR4524B-201ENST00000581569 115 ntBASIC1.86□□□□□ -2.11
PPARGC1AQ9UBK2 MIR8063-201ENST00000621930 81 ntBASIC1.86□□□□□ -2.11
PPARGC1AQ9UBK2 Y_RNA.116-201ENST00000363292 103 ntBASIC1.85□□□□□ -2.11
PPARGC1AQ9UBK2 SNORD1A-201ENST00000364968 72 ntBASIC1.85□□□□□ -2.11
PPARGC1AQ9UBK2 RNU6-1065P-201ENST00000384513 106 ntBASIC1.85□□□□□ -2.11
PPARGC1AQ9UBK2 Y_RNA.549-201ENST00000384657 102 ntBASIC1.85□□□□□ -2.11
PPARGC1AQ9UBK2 MIR1912-201ENST00000410389 80 ntBASIC1.85□□□□□ -2.11
PPARGC1AQ9UBK2 AC079140.2-201ENST00000506193 142 ntBASIC1.85□□□□□ -2.11
PPARGC1AQ9UBK2 RNU7-6P-201ENST00000516845 62 ntBASIC1.85□□□□□ -2.11
PPARGC1AQ9UBK2 MIR8065-201ENST00000620577 100 ntBASIC1.85□□□□□ -2.11
PPARGC1AQ9UBK2 AP000648.3-201ENST00000623539 4507 ntBASIC1.85□□□□□ -2.11
PPARGC1AQ9UBK2 Y_RNA.344-201ENST00000365381 112 ntBASIC1.84□□□□□ -2.11
PPARGC1AQ9UBK2 RNU6-106P-201ENST00000384405 107 ntBASIC1.84□□□□□ -2.11
PPARGC1AQ9UBK2 SNORD77B-201ENST00000391112 67 ntBASIC1.84□□□□□ -2.11
PPARGC1AQ9UBK2 RNU6-602P-201ENST00000411155 105 ntBASIC1.84□□□□□ -2.11
PPARGC1AQ9UBK2 HMGN1P33-201ENST00000432945 451 ntBASIC1.84□□□□□ -2.11
PPARGC1AQ9UBK2 AC009474.2-201ENST00000451383 136 ntBASIC1.84□□□□□ -2.11
PPARGC1AQ9UBK2 AC005908.1-201ENST00000468701 347 ntBASIC1.84□□□□□ -2.11
PPARGC1AQ9UBK2 RNA5SP33-201ENST00000516687 98 ntBASIC1.84□□□□□ -2.11
PPARGC1AQ9UBK2 MIR3122-201ENST00000577243 73 ntBASIC1.84□□□□□ -2.11
PPARGC1AQ9UBK2 AC024614.2-201ENST00000577584 372 ntBASIC1.84□□□□□ -2.11
PPARGC1AQ9UBK2 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.84□□□□□ -2.11
PPARGC1AQ9UBK2 AC087741.2-201ENST00000619415 172 ntBASIC1.84□□□□□ -2.11
PPARGC1AQ9UBK2 AL162726.3-218ENST00000636401 95 ntBASIC1.84□□□□□ -2.11
PPARGC1AQ9UBK2 SNORA63.5-201ENST00000363548 123 ntBASIC1.83□□□□□ -2.12
PPARGC1AQ9UBK2 Y_RNA.470-201ENST00000384307 117 ntBASIC1.83□□□□□ -2.12
PPARGC1AQ9UBK2 SNORD38B-201ENST00000384690 67 ntBASIC1.83□□□□□ -2.12
PPARGC1AQ9UBK2 AL031737.1-201ENST00000450125 223 ntBASIC1.83□□□□□ -2.12
PPARGC1AQ9UBK2 RNU6-237P-201ENST00000515985 71 ntBASIC1.83□□□□□ -2.12
PPARGC1AQ9UBK2 MIR4419B-201ENST00000577260 68 ntBASIC1.83□□□□□ -2.12
PPARGC1AQ9UBK2 AL096861.1-201ENST00000610899 123 ntBASIC1.83□□□□□ -2.12
PPARGC1AQ9UBK2 SNORD38B-202ENST00000625943 69 ntBASIC1.83□□□□□ -2.12
PPARGC1AQ9UBK2 Y_RNA.163-201ENST00000363702 113 ntBASIC1.82□□□□□ -2.12
PPARGC1AQ9UBK2 RNU6-1014P-201ENST00000383940 103 ntBASIC1.82□□□□□ -2.12
PPARGC1AQ9UBK2 MIR1302-5-201ENST00000408164 150 ntBASIC1.82□□□□□ -2.12
PPARGC1AQ9UBK2 AC245047.7-201ENST00000440265 293 ntBASIC1.82□□□□□ -2.12
PPARGC1AQ9UBK2 AC027119.1-201ENST00000440877 241 ntBASIC1.82□□□□□ -2.12
PPARGC1AQ9UBK2 AC068339.1-201ENST00000526965 141 ntBASIC1.82□□□□□ -2.12
PPARGC1AQ9UBK2 MIR5009-201ENST00000578736 100 ntBASIC1.82□□□□□ -2.12
PPARGC1AQ9UBK2 MIR4255-201ENST00000579351 72 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 209.6 ms