Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 Y_RNA.35-201ENST00000362601 101 ntBASIC1.59□□□□□ -2.15
DNMT3BQ9UBC3 SNORA7.1-201ENST00000363750 139 ntBASIC1.59□□□□□ -2.15
DNMT3BQ9UBC3 SNORD18B-201ENST00000365659 72 ntBASIC1.59□□□□□ -2.15
DNMT3BQ9UBC3 SNORA22-201ENST00000383907 134 ntBASIC1.59□□□□□ -2.15
DNMT3BQ9UBC3 SNORA70.7-201ENST00000384159 133 ntBASIC1.59□□□□□ -2.15
DNMT3BQ9UBC3 SNORA27-201ENST00000384323 126 ntBASIC1.59□□□□□ -2.15
DNMT3BQ9UBC3 MIR1263-201ENST00000408324 86 ntBASIC1.59□□□□□ -2.15
DNMT3BQ9UBC3 RNU6-938P-201ENST00000411285 103 ntBASIC1.59□□□□□ -2.15
DNMT3BQ9UBC3 PDCD5P2-201ENST00000507570 312 ntBASIC1.59□□□□□ -2.15
DNMT3BQ9UBC3 SNORD111.1-201ENST00000516421 86 ntBASIC1.59□□□□□ -2.15
DNMT3BQ9UBC3 SCARNA15-202ENST00000516881 127 ntBASIC1.59□□□□□ -2.15
DNMT3BQ9UBC3 AC090821.2-201ENST00000523552 176 ntBASIC1.59□□□□□ -2.15
DNMT3BQ9UBC3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
DNMT3BQ9UBC3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.59□□□□□ -2.16
DNMT3BQ9UBC3 RNU6-392P-201ENST00000364926 101 ntBASIC1.58□□□□□ -2.16
DNMT3BQ9UBC3 Y_RNA.366-201ENST00000365540 102 ntBASIC1.58□□□□□ -2.16
DNMT3BQ9UBC3 Y_RNA.617-201ENST00000410920 90 ntBASIC1.58□□□□□ -2.16
DNMT3BQ9UBC3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.58□□□□□ -2.16
DNMT3BQ9UBC3 RPL39P39-201ENST00000455840 151 ntBASIC1.58□□□□□ -2.16
DNMT3BQ9UBC3 RN7SKP19-201ENST00000516016 252 ntBASIC1.58□□□□□ -2.16
DNMT3BQ9UBC3 RN7SKP179-201ENST00000516126 217 ntBASIC1.58□□□□□ -2.16
DNMT3BQ9UBC3 Y_RNA.709-201ENST00000516952 92 ntBASIC1.58□□□□□ -2.16
DNMT3BQ9UBC3 SNORA31.24-201ENST00000517232 57 ntBASIC1.58□□□□□ -2.16
DNMT3BQ9UBC3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.58□□□□□ -2.16
DNMT3BQ9UBC3 MIR4421-201ENST00000578133 69 ntBASIC1.58□□□□□ -2.16
DNMT3BQ9UBC3 HSPE1P19-201ENST00000603327 295 ntBASIC1.58□□□□□ -2.16
DNMT3BQ9UBC3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.58□□□□□ -2.16
DNMT3BQ9UBC3 AP000648.3-201ENST00000623539 4507 ntBASIC1.58□□□□□ -2.16
DNMT3BQ9UBC3 Y_RNA.440-201ENST00000384120 114 ntBASIC1.57□□□□□ -2.16
DNMT3BQ9UBC3 Y_RNA.537-201ENST00000384626 109 ntBASIC1.57□□□□□ -2.16
DNMT3BQ9UBC3 SNORD28B-201ENST00000390993 75 ntBASIC1.57□□□□□ -2.16
DNMT3BQ9UBC3 RPS26P48-201ENST00000491713 339 ntBASIC1.57□□□□□ -2.16
DNMT3BQ9UBC3 RNU6-589P-201ENST00000516485 107 ntBASIC1.57□□□□□ -2.16
DNMT3BQ9UBC3 RNU7-70P-201ENST00000516941 66 ntBASIC1.57□□□□□ -2.16
DNMT3BQ9UBC3 RNU1-92P-201ENST00000517017 135 ntBASIC1.57□□□□□ -2.16
DNMT3BQ9UBC3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.57□□□□□ -2.16
DNMT3BQ9UBC3 AL121890.5-201ENST00000620848 304 ntBASIC1.57□□□□□ -2.16
DNMT3BQ9UBC3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.56□□□□□ -2.16
DNMT3BQ9UBC3 Y_RNA.355-201ENST00000365462 98 ntBASIC1.56□□□□□ -2.16
DNMT3BQ9UBC3 Y_RNA.508-201ENST00000384502 114 ntBASIC1.56□□□□□ -2.16
DNMT3BQ9UBC3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.56□□□□□ -2.16
DNMT3BQ9UBC3 RPS29P24-201ENST00000486345 171 ntBASIC1.56□□□□□ -2.16
DNMT3BQ9UBC3 RNU6-240P-201ENST00000516098 97 ntBASIC1.56□□□□□ -2.16
DNMT3BQ9UBC3 AC025166.1-201ENST00000612411 163 ntBASIC1.56□□□□□ -2.16
DNMT3BQ9UBC3 AC008133.2-201ENST00000624540 351 ntBASIC1.56□□□□□ -2.16
DNMT3BQ9UBC3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.56□□□□□ -2.16
DNMT3BQ9UBC3 MTND5P18-201ENST00000445624 1801 ntBASIC1.55□□□□□ -2.16
DNMT3BQ9UBC3 Y_RNA.351-201ENST00000365436 96 ntBASIC1.55□□□□□ -2.16
DNMT3BQ9UBC3 Y_RNA.454-201ENST00000384224 113 ntBASIC1.55□□□□□ -2.16
DNMT3BQ9UBC3 SNORA51.10-201ENST00000384418 136 ntBASIC1.55□□□□□ -2.16
DNMT3BQ9UBC3 Y_RNA.494-201ENST00000384432 111 ntBASIC1.55□□□□□ -2.16
DNMT3BQ9UBC3 MIR548A3-201ENST00000385297 97 ntBASIC1.55□□□□□ -2.16
DNMT3BQ9UBC3 AL354695.1-201ENST00000427935 228 ntBASIC1.55□□□□□ -2.16
DNMT3BQ9UBC3 MTATP6P21-201ENST00000440681 189 ntBASIC1.55□□□□□ -2.16
DNMT3BQ9UBC3 RNU7-67P-201ENST00000459003 62 ntBASIC1.55□□□□□ -2.16
DNMT3BQ9UBC3 RNU7-96P-201ENST00000459535 64 ntBASIC1.55□□□□□ -2.16
DNMT3BQ9UBC3 RNU7-80P-201ENST00000459562 61 ntBASIC1.55□□□□□ -2.16
DNMT3BQ9UBC3 RNU6-947P-201ENST00000516264 106 ntBASIC1.55□□□□□ -2.16
DNMT3BQ9UBC3 RNU6-902P-201ENST00000517212 91 ntBASIC1.55□□□□□ -2.16
DNMT3BQ9UBC3 AL512310.8-201ENST00000550183 120 ntBASIC1.55□□□□□ -2.16
DNMT3BQ9UBC3 MIR3664-201ENST00000579074 99 ntBASIC1.55□□□□□ -2.16
DNMT3BQ9UBC3 AL670379.3-201ENST00000605040 251 ntBASIC1.55□□□□□ -2.16
DNMT3BQ9UBC3 MIR4791-201ENST00000607666 84 ntBASIC1.55□□□□□ -2.16
DNMT3BQ9UBC3 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.55□□□□□ -2.16
DNMT3BQ9UBC3 MIR342-201ENST00000362212 99 ntBASIC1.54□□□□□ -2.16
DNMT3BQ9UBC3 RNU6-647P-201ENST00000364243 107 ntBASIC1.54□□□□□ -2.16
DNMT3BQ9UBC3 SNORD116-21-201ENST00000384507 92 ntBASIC1.54□□□□□ -2.16
DNMT3BQ9UBC3 Y_RNA.549-201ENST00000384657 102 ntBASIC1.54□□□□□ -2.16
DNMT3BQ9UBC3 MIRLET7F2-201ENST00000385277 83 ntBASIC1.54□□□□□ -2.16
DNMT3BQ9UBC3 MIR1304-201ENST00000408243 91 ntBASIC1.54□□□□□ -2.16
DNMT3BQ9UBC3 MIR1276-201ENST00000408707 83 ntBASIC1.54□□□□□ -2.16
DNMT3BQ9UBC3 RPS27P16-201ENST00000425758 201 ntBASIC1.54□□□□□ -2.16
DNMT3BQ9UBC3 RPS29P29-201ENST00000456396 171 ntBASIC1.54□□□□□ -2.16
DNMT3BQ9UBC3 RNU2-13P-201ENST00000515909 113 ntBASIC1.54□□□□□ -2.16
DNMT3BQ9UBC3 MIR4285-201ENST00000581001 85 ntBASIC1.54□□□□□ -2.16
DNMT3BQ9UBC3 AC243994.1-201ENST00000618627 109 ntBASIC1.54□□□□□ -2.16
DNMT3BQ9UBC3 RNU6-834P-201ENST00000362367 110 ntBASIC1.53□□□□□ -2.16
DNMT3BQ9UBC3 RNA5SP48-201ENST00000363969 126 ntBASIC1.53□□□□□ -2.16
DNMT3BQ9UBC3 RNU4-16P-201ENST00000364737 141 ntBASIC1.53□□□□□ -2.16
DNMT3BQ9UBC3 RNU6-147P-201ENST00000383983 107 ntBASIC1.53□□□□□ -2.16
DNMT3BQ9UBC3 Y_RNA.528-201ENST00000384575 108 ntBASIC1.53□□□□□ -2.16
DNMT3BQ9UBC3 MIR570-201ENST00000384917 97 ntBASIC1.53□□□□□ -2.16
DNMT3BQ9UBC3 MT-TI-201ENST00000387365 69 ntBASIC1.53□□□□□ -2.16
DNMT3BQ9UBC3 AC063976.4-201ENST00000421971 163 ntBASIC1.53□□□□□ -2.16
DNMT3BQ9UBC3 AL035398.1-201ENST00000430869 322 ntBASIC1.53□□□□□ -2.16
DNMT3BQ9UBC3 Y_RNA.649-201ENST00000459077 103 ntBASIC1.53□□□□□ -2.16
DNMT3BQ9UBC3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.53□□□□□ -2.16
DNMT3BQ9UBC3 RNU7-53P-201ENST00000516705 60 ntBASIC1.53□□□□□ -2.16
DNMT3BQ9UBC3 uc_338.28-201ENST00000612082 187 ntBASIC1.53□□□□□ -2.16
DNMT3BQ9UBC3 U6.95-201ENST00000636931 70 ntBASIC1.53□□□□□ -2.16
DNMT3BQ9UBC3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.53□□□□□ -2.17
DNMT3BQ9UBC3 MIR302B-201ENST00000362188 73 ntBASIC1.52□□□□□ -2.17
DNMT3BQ9UBC3 MIR450A1-201ENST00000362262 91 ntBASIC1.52□□□□□ -2.17
DNMT3BQ9UBC3 Y_RNA.116-201ENST00000363292 103 ntBASIC1.52□□□□□ -2.17
DNMT3BQ9UBC3 RNU6-997P-201ENST00000384725 107 ntBASIC1.52□□□□□ -2.17
DNMT3BQ9UBC3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
DNMT3BQ9UBC3 RNU6-998P-201ENST00000515894 101 ntBASIC1.52□□□□□ -2.17
DNMT3BQ9UBC3 SNORA31.4-201ENST00000516049 129 ntBASIC1.52□□□□□ -2.17
DNMT3BQ9UBC3 RNU6-958P-201ENST00000516995 106 ntBASIC1.52□□□□□ -2.17
DNMT3BQ9UBC3 AC022523.2-201ENST00000561045 150 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms