Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AL596211.1-201ENST00000569873 2277 ntBASIC1.39□□□□□ -2.19
COL20A1Q9P218 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
COL20A1Q9P218 RNU6-774P-201ENST00000363238 107 ntBASIC1.38□□□□□ -2.19
COL20A1Q9P218 RNY1P11-201ENST00000363759 113 ntBASIC1.38□□□□□ -2.19
COL20A1Q9P218 SNORD50.2-201ENST00000365465 70 ntBASIC1.38□□□□□ -2.19
COL20A1Q9P218 SNORD12-201ENST00000391002 90 ntBASIC1.38□□□□□ -2.19
COL20A1Q9P218 MIR548M-201ENST00000408260 86 ntBASIC1.38□□□□□ -2.19
COL20A1Q9P218 AL392103.1-201ENST00000447000 198 ntBASIC1.38□□□□□ -2.19
COL20A1Q9P218 MIR2115-201ENST00000516657 100 ntBASIC1.38□□□□□ -2.19
COL20A1Q9P218 RNU2-60P-201ENST00000517290 128 ntBASIC1.38□□□□□ -2.19
COL20A1Q9P218 AC011603.4-201ENST00000611325 277 ntBASIC1.38□□□□□ -2.19
COL20A1Q9P218 MIR7974-201ENST00000615835 79 ntBASIC1.38□□□□□ -2.19
COL20A1Q9P218 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
COL20A1Q9P218 RNA5SP327-201ENST00000362494 101 ntBASIC1.37□□□□□ -2.19
COL20A1Q9P218 Y_RNA.116-201ENST00000363292 103 ntBASIC1.37□□□□□ -2.19
COL20A1Q9P218 SNORA1.1-201ENST00000364671 133 ntBASIC1.37□□□□□ -2.19
COL20A1Q9P218 Y_RNA.466-201ENST00000384294 113 ntBASIC1.37□□□□□ -2.19
COL20A1Q9P218 MIR222-201ENST00000384992 110 ntBASIC1.37□□□□□ -2.19
COL20A1Q9P218 snoU13.18-201ENST00000459483 104 ntBASIC1.37□□□□□ -2.19
COL20A1Q9P218 RNU6-113P-201ENST00000516653 101 ntBASIC1.37□□□□□ -2.19
COL20A1Q9P218 MIR3133-201ENST00000583157 78 ntBASIC1.37□□□□□ -2.19
COL20A1Q9P218 AL022345.2-201ENST00000606307 135 ntBASIC1.37□□□□□ -2.19
COL20A1Q9P218 AL020996.3-201ENST00000606617 222 ntBASIC1.37□□□□□ -2.19
COL20A1Q9P218 MIR8055-201ENST00000610739 97 ntBASIC1.37□□□□□ -2.19
COL20A1Q9P218 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.37□□□□□ -2.19
COL20A1Q9P218 SNORA25-201ENST00000384384 134 ntBASIC1.36□□□□□ -2.19
COL20A1Q9P218 SNORA20-201ENST00000384662 132 ntBASIC1.36□□□□□ -2.19
COL20A1Q9P218 Y_RNA.568-201ENST00000384742 113 ntBASIC1.36□□□□□ -2.19
COL20A1Q9P218 RNU6-913P-201ENST00000390913 95 ntBASIC1.36□□□□□ -2.19
COL20A1Q9P218 MIR1185-1-201ENST00000408598 86 ntBASIC1.36□□□□□ -2.19
COL20A1Q9P218 RNU4-61P-201ENST00000411243 107 ntBASIC1.36□□□□□ -2.19
COL20A1Q9P218 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.36□□□□□ -2.19
COL20A1Q9P218 SNORD79.1-201ENST00000516069 84 ntBASIC1.36□□□□□ -2.19
COL20A1Q9P218 SEPT14P17-201ENST00000617978 177 ntBASIC1.36□□□□□ -2.19
COL20A1Q9P218 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
COL20A1Q9P218 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
COL20A1Q9P218 SNORA25.8-201ENST00000364831 128 ntBASIC1.35□□□□□ -2.19
COL20A1Q9P218 Y_RNA.354-201ENST00000365448 111 ntBASIC1.35□□□□□ -2.19
COL20A1Q9P218 Y_RNA.420-201ENST00000384043 110 ntBASIC1.35□□□□□ -2.19
COL20A1Q9P218 RNY1P6-201ENST00000384193 109 ntBASIC1.35□□□□□ -2.19
COL20A1Q9P218 SNORD38B-201ENST00000384690 67 ntBASIC1.35□□□□□ -2.19
COL20A1Q9P218 RNU6-460P-201ENST00000391158 108 ntBASIC1.35□□□□□ -2.19
COL20A1Q9P218 MRPL35P3-201ENST00000421557 364 ntBASIC1.35□□□□□ -2.19
COL20A1Q9P218 RNU6-893P-201ENST00000458841 100 ntBASIC1.35□□□□□ -2.19
COL20A1Q9P218 RNU6-346P-201ENST00000516288 111 ntBASIC1.35□□□□□ -2.19
COL20A1Q9P218 RNU6-426P-201ENST00000516464 97 ntBASIC1.35□□□□□ -2.19
COL20A1Q9P218 AP001328.1-201ENST00000528550 176 ntBASIC1.35□□□□□ -2.19
COL20A1Q9P218 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.35□□□□□ -2.19
COL20A1Q9P218 SNORD38B-202ENST00000625943 69 ntBASIC1.35□□□□□ -2.19
COL20A1Q9P218 Z97988.1-201ENST00000637697 135 ntBASIC1.35□□□□□ -2.19
COL20A1Q9P218 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
COL20A1Q9P218 AC010332.2-201ENST00000613083 1904 ntBASIC1.34□□□□□ -2.19
COL20A1Q9P218 Y_RNA.224-201ENST00000364308 111 ntBASIC1.34□□□□□ -2.19
COL20A1Q9P218 RNU6-187P-201ENST00000384139 106 ntBASIC1.34□□□□□ -2.19
COL20A1Q9P218 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
COL20A1Q9P218 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.34□□□□□ -2.19
COL20A1Q9P218 MIR1302-7-201ENST00000408841 72 ntBASIC1.34□□□□□ -2.19
COL20A1Q9P218 RPS3AP1-201ENST00000413190 320 ntBASIC1.34□□□□□ -2.19
COL20A1Q9P218 RNU7-90P-201ENST00000459216 62 ntBASIC1.34□□□□□ -2.19
COL20A1Q9P218 Y_RNA.690-201ENST00000516603 95 ntBASIC1.34□□□□□ -2.19
COL20A1Q9P218 AC019288.1-201ENST00000557918 224 ntBASIC1.34□□□□□ -2.19
COL20A1Q9P218 AP000753.3-201ENST00000604083 169 ntBASIC1.34□□□□□ -2.19
COL20A1Q9P218 MIR26B-201ENST00000362251 77 ntBASIC1.33□□□□□ -2.2
COL20A1Q9P218 RNU6-915P-201ENST00000364943 103 ntBASIC1.33□□□□□ -2.2
COL20A1Q9P218 Y_RNA.430-201ENST00000384081 110 ntBASIC1.33□□□□□ -2.2
COL20A1Q9P218 MIR613-201ENST00000385248 95 ntBASIC1.33□□□□□ -2.2
COL20A1Q9P218 MT-TN-201ENST00000387400 73 ntBASIC1.33□□□□□ -2.2
COL20A1Q9P218 RNU6-1319P-201ENST00000390855 104 ntBASIC1.33□□□□□ -2.2
COL20A1Q9P218 RNU6-747P-201ENST00000390928 104 ntBASIC1.33□□□□□ -2.2
COL20A1Q9P218 RNU6-241P-201ENST00000391148 104 ntBASIC1.33□□□□□ -2.2
COL20A1Q9P218 RNU6-613P-201ENST00000410412 108 ntBASIC1.33□□□□□ -2.2
COL20A1Q9P218 RNU6-955P-201ENST00000410497 104 ntBASIC1.33□□□□□ -2.2
COL20A1Q9P218 RNU6-177P-201ENST00000411257 104 ntBASIC1.33□□□□□ -2.2
COL20A1Q9P218 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.33□□□□□ -2.2
COL20A1Q9P218 RNU7-21P-201ENST00000459430 62 ntBASIC1.33□□□□□ -2.2
COL20A1Q9P218 Y_RNA.686-201ENST00000516548 134 ntBASIC1.33□□□□□ -2.2
COL20A1Q9P218 Y_RNA.692-201ENST00000516627 105 ntBASIC1.33□□□□□ -2.2
COL20A1Q9P218 U7.2-201ENST00000607576 63 ntBASIC1.33□□□□□ -2.2
COL20A1Q9P218 MIR6504-201ENST00000613520 61 ntBASIC1.33□□□□□ -2.2
COL20A1Q9P218 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.33□□□□□ -2.2
COL20A1Q9P218 MIR6767-201ENST00000637302 66 ntBASIC1.33□□□□□ -2.2
COL20A1Q9P218 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.32□□□□□ -2.2
COL20A1Q9P218 SNORD114-27-201ENST00000363766 70 ntBASIC1.32□□□□□ -2.2
COL20A1Q9P218 Y_RNA.330-201ENST00000365230 109 ntBASIC1.32□□□□□ -2.2
COL20A1Q9P218 Y_RNA.363-201ENST00000365529 113 ntBASIC1.32□□□□□ -2.2
COL20A1Q9P218 SNORA75.2-201ENST00000391138 150 ntBASIC1.32□□□□□ -2.2
COL20A1Q9P218 SNORA75.3-201ENST00000391231 150 ntBASIC1.32□□□□□ -2.2
COL20A1Q9P218 SNORA26.6-201ENST00000391256 115 ntBASIC1.32□□□□□ -2.2
COL20A1Q9P218 MIR4264-201ENST00000583520 66 ntBASIC1.32□□□□□ -2.2
COL20A1Q9P218 TUG1_4.1-201ENST00000619464 181 ntBASIC1.32□□□□□ -2.2
COL20A1Q9P218 MIR6717-201ENST00000622747 73 ntBASIC1.32□□□□□ -2.2
COL20A1Q9P218 AC021613.1-201ENST00000623880 111 ntBASIC1.32□□□□□ -2.2
COL20A1Q9P218 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
COL20A1Q9P218 RNU6-349P-201ENST00000362402 107 ntBASIC1.31□□□□□ -2.2
COL20A1Q9P218 RNU6-309P-201ENST00000364573 106 ntBASIC1.31□□□□□ -2.2
COL20A1Q9P218 SNORD114-22-201ENST00000365423 72 ntBASIC1.31□□□□□ -2.2
COL20A1Q9P218 SNORA40-201ENST00000388090 126 ntBASIC1.31□□□□□ -2.2
COL20A1Q9P218 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.31□□□□□ -2.2
COL20A1Q9P218 Y_RNA.651-201ENST00000459380 103 ntBASIC1.31□□□□□ -2.2
COL20A1Q9P218 Y_RNA.757-201ENST00000578934 114 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms