Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 RNU6-747P-201ENST00000390928 104 ntBASIC2.18□□□□□ -2.06
PDLIM7Q9NR12 RNU6-241P-201ENST00000391148 104 ntBASIC2.18□□□□□ -2.06
PDLIM7Q9NR12 RNU6-177P-201ENST00000411257 104 ntBASIC2.18□□□□□ -2.06
PDLIM7Q9NR12 AC025033.1-201ENST00000463883 194 ntBASIC2.18□□□□□ -2.06
PDLIM7Q9NR12 RNU2-13P-201ENST00000515909 113 ntBASIC2.18□□□□□ -2.06
PDLIM7Q9NR12 SNORA40.13-201ENST00000516379 120 ntBASIC2.18□□□□□ -2.06
PDLIM7Q9NR12 RNU6-1258P-201ENST00000516911 111 ntBASIC2.18□□□□□ -2.06
PDLIM7Q9NR12 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.18□□□□□ -2.06
PDLIM7Q9NR12 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.18□□□□□ -2.06
PDLIM7Q9NR12 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.18□□□□□ -2.06
PDLIM7Q9NR12 MIR4713-201ENST00000582691 75 ntBASIC2.18□□□□□ -2.06
PDLIM7Q9NR12 FAM106DP-201ENST00000586416 501 ntBASIC2.18□□□□□ -2.06
PDLIM7Q9NR12 AC243994.1-201ENST00000618627 109 ntBASIC2.18□□□□□ -2.06
PDLIM7Q9NR12 RNU6-1190P-201ENST00000410811 104 ntBASIC2.17□□□□□ -2.06
PDLIM7Q9NR12 AC003989.2-201ENST00000440224 169 ntBASIC2.17□□□□□ -2.06
PDLIM7Q9NR12 AC245517.4-201ENST00000448601 281 ntBASIC2.17□□□□□ -2.06
PDLIM7Q9NR12 RNU7-113P-201ENST00000459273 62 ntBASIC2.17□□□□□ -2.06
PDLIM7Q9NR12 SNORA31.17-201ENST00000516953 127 ntBASIC2.17□□□□□ -2.06
PDLIM7Q9NR12 MIR3152-201ENST00000579801 74 ntBASIC2.17□□□□□ -2.06
PDLIM7Q9NR12 MIR4791-201ENST00000607666 84 ntBASIC2.17□□□□□ -2.06
PDLIM7Q9NR12 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
PDLIM7Q9NR12 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PDLIM7Q9NR12 SNORA22.1-201ENST00000362701 134 ntBASIC2.16□□□□□ -2.06
PDLIM7Q9NR12 SNORA24-201ENST00000384096 131 ntBASIC2.16□□□□□ -2.06
PDLIM7Q9NR12 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
PDLIM7Q9NR12 RNU6-913P-201ENST00000390913 95 ntBASIC2.16□□□□□ -2.06
PDLIM7Q9NR12 SNORA26.6-201ENST00000391256 115 ntBASIC2.16□□□□□ -2.06
PDLIM7Q9NR12 MIR1912-201ENST00000410389 80 ntBASIC2.16□□□□□ -2.06
PDLIM7Q9NR12 AC113410.1-201ENST00000505029 247 ntBASIC2.16□□□□□ -2.06
PDLIM7Q9NR12 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.16□□□□□ -2.06
PDLIM7Q9NR12 SNORA44.1-201ENST00000517031 108 ntBASIC2.16□□□□□ -2.06
PDLIM7Q9NR12 Y_RNA.773-201ENST00000607168 90 ntBASIC2.16□□□□□ -2.06
PDLIM7Q9NR12 MIR1255B1-201ENST00000636325 63 ntBASIC2.16□□□□□ -2.06
PDLIM7Q9NR12 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.16□□□□□ -2.06
PDLIM7Q9NR12 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
PDLIM7Q9NR12 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.16□□□□□ -2.06
PDLIM7Q9NR12 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.16□□□□□ -2.06
PDLIM7Q9NR12 Y_RNA.78-201ENST00000362970 110 ntBASIC2.15□□□□□ -2.07
PDLIM7Q9NR12 RNU6-1131P-201ENST00000364955 107 ntBASIC2.15□□□□□ -2.07
PDLIM7Q9NR12 SNORA25.9-201ENST00000365087 128 ntBASIC2.15□□□□□ -2.07
PDLIM7Q9NR12 MIR489-201ENST00000384923 84 ntBASIC2.15□□□□□ -2.07
PDLIM7Q9NR12 RNU4-62P-201ENST00000410125 130 ntBASIC2.15□□□□□ -2.07
PDLIM7Q9NR12 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.15□□□□□ -2.07
PDLIM7Q9NR12 AP1B1P2-201ENST00000416196 106 ntBASIC2.15□□□□□ -2.07
PDLIM7Q9NR12 RNU6-893P-201ENST00000458841 100 ntBASIC2.15□□□□□ -2.07
PDLIM7Q9NR12 TRMT112P2-201ENST00000512910 132 ntBASIC2.15□□□□□ -2.07
PDLIM7Q9NR12 RNU6-904P-201ENST00000516206 101 ntBASIC2.15□□□□□ -2.07
PDLIM7Q9NR12 RNU6-970P-201ENST00000516312 107 ntBASIC2.15□□□□□ -2.07
PDLIM7Q9NR12 DNAJC19P9-201ENST00000555084 351 ntBASIC2.15□□□□□ -2.07
PDLIM7Q9NR12 MIR3618-201ENST00000580330 88 ntBASIC2.15□□□□□ -2.07
PDLIM7Q9NR12 AL096840.1-201ENST00000603287 93 ntBASIC2.15□□□□□ -2.07
PDLIM7Q9NR12 MIR6717-201ENST00000622747 73 ntBASIC2.15□□□□□ -2.07
PDLIM7Q9NR12 AP000648.3-201ENST00000623539 4507 ntBASIC2.15□□□□□ -2.07
PDLIM7Q9NR12 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PDLIM7Q9NR12 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
PDLIM7Q9NR12 Y_RNA.470-201ENST00000384307 117 ntBASIC2.14□□□□□ -2.07
PDLIM7Q9NR12 RNU4-69P-201ENST00000410677 143 ntBASIC2.14□□□□□ -2.07
PDLIM7Q9NR12 RNU7-73P-201ENST00000458743 63 ntBASIC2.14□□□□□ -2.07
PDLIM7Q9NR12 SNORA72.7-201ENST00000516349 94 ntBASIC2.14□□□□□ -2.07
PDLIM7Q9NR12 SNORA25.15-201ENST00000516487 89 ntBASIC2.14□□□□□ -2.07
PDLIM7Q9NR12 AL020996.3-201ENST00000606617 222 ntBASIC2.14□□□□□ -2.07
PDLIM7Q9NR12 Y_RNA.818-201ENST00000618813 71 ntBASIC2.14□□□□□ -2.07
PDLIM7Q9NR12 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
PDLIM7Q9NR12 MIR6841-201ENST00000637129 72 ntBASIC2.14□□□□□ -2.07
PDLIM7Q9NR12 SNORD115-2-201ENST00000362842 82 ntBASIC2.13□□□□□ -2.07
PDLIM7Q9NR12 SNORD115-19-201ENST00000363098 82 ntBASIC2.13□□□□□ -2.07
PDLIM7Q9NR12 SNORD115-18-201ENST00000363293 82 ntBASIC2.13□□□□□ -2.07
PDLIM7Q9NR12 SNORD115-17-201ENST00000364612 82 ntBASIC2.13□□□□□ -2.07
PDLIM7Q9NR12 Y_RNA.299-201ENST00000364973 94 ntBASIC2.13□□□□□ -2.07
PDLIM7Q9NR12 SNORD115-20-201ENST00000365099 82 ntBASIC2.13□□□□□ -2.07
PDLIM7Q9NR12 Y_RNA.507-201ENST00000384500 99 ntBASIC2.13□□□□□ -2.07
PDLIM7Q9NR12 RNU6-360P-201ENST00000390944 104 ntBASIC2.13□□□□□ -2.07
PDLIM7Q9NR12 RNA5SP261-201ENST00000410536 106 ntBASIC2.13□□□□□ -2.07
PDLIM7Q9NR12 AC079804.2-201ENST00000490376 200 ntBASIC2.13□□□□□ -2.07
PDLIM7Q9NR12 RNA5SP33-201ENST00000516687 98 ntBASIC2.13□□□□□ -2.07
PDLIM7Q9NR12 SNORA74.3-201ENST00000517108 154 ntBASIC2.13□□□□□ -2.07
PDLIM7Q9NR12 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.13□□□□□ -2.07
PDLIM7Q9NR12 AP000553.5-201ENST00000641933 54 ntBASIC2.13□□□□□ -2.07
PDLIM7Q9NR12 RNU6-203P-201ENST00000384038 104 ntBASIC2.12□□□□□ -2.07
PDLIM7Q9NR12 RNU6-49P-201ENST00000384256 107 ntBASIC2.12□□□□□ -2.07
PDLIM7Q9NR12 Y_RNA.537-201ENST00000384626 109 ntBASIC2.12□□□□□ -2.07
PDLIM7Q9NR12 RNA5SP338-201ENST00000410495 85 ntBASIC2.12□□□□□ -2.07
PDLIM7Q9NR12 HMGN2P19-201ENST00000425149 265 ntBASIC2.12□□□□□ -2.07
PDLIM7Q9NR12 RNU6-717P-201ENST00000459076 104 ntBASIC2.12□□□□□ -2.07
PDLIM7Q9NR12 AC090255.1-201ENST00000495779 349 ntBASIC2.12□□□□□ -2.07
PDLIM7Q9NR12 RNU1-40P-201ENST00000516816 164 ntBASIC2.12□□□□□ -2.07
PDLIM7Q9NR12 RNU1-97P-201ENST00000516872 164 ntBASIC2.12□□□□□ -2.07
PDLIM7Q9NR12 AC022254.1-201ENST00000567857 235 ntBASIC2.12□□□□□ -2.07
PDLIM7Q9NR12 MIR548AE2-201ENST00000583456 67 ntBASIC2.12□□□□□ -2.07
PDLIM7Q9NR12 AC084768.2-201ENST00000622736 221 ntBASIC2.12□□□□□ -2.07
PDLIM7Q9NR12 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
PDLIM7Q9NR12 RNU6-363P-201ENST00000362895 105 ntBASIC2.11□□□□□ -2.07
PDLIM7Q9NR12 Y_RNA.155-201ENST00000363632 101 ntBASIC2.11□□□□□ -2.07
PDLIM7Q9NR12 RNA5SP37-201ENST00000365420 130 ntBASIC2.11□□□□□ -2.07
PDLIM7Q9NR12 Y_RNA.466-201ENST00000384294 113 ntBASIC2.11□□□□□ -2.07
PDLIM7Q9NR12 RNU6-1067P-201ENST00000384752 107 ntBASIC2.11□□□□□ -2.07
PDLIM7Q9NR12 MIR9-3-201ENST00000385084 90 ntBASIC2.11□□□□□ -2.07
PDLIM7Q9NR12 HMGN1P33-201ENST00000432945 451 ntBASIC2.11□□□□□ -2.07
PDLIM7Q9NR12 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.11□□□□□ -2.07
PDLIM7Q9NR12 RNU6-917P-201ENST00000516294 104 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms