Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.62□□□□□ -1.99
NEUROD4Q9HD90 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NEUROD4Q9HD90 RNA5SP212-201ENST00000391223 107 ntBASIC2.61□□□□□ -1.99
NEUROD4Q9HD90 RNU6-279P-201ENST00000391297 101 ntBASIC2.61□□□□□ -1.99
NEUROD4Q9HD90 RNA5SP508-201ENST00000411327 119 ntBASIC2.61□□□□□ -1.99
NEUROD4Q9HD90 RNU7-137P-201ENST00000516788 62 ntBASIC2.61□□□□□ -1.99
NEUROD4Q9HD90 SNORA31.17-201ENST00000516953 127 ntBASIC2.61□□□□□ -1.99
NEUROD4Q9HD90 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.61□□□□□ -1.99
NEUROD4Q9HD90 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NEUROD4Q9HD90 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.61□□□□□ -1.99
NEUROD4Q9HD90 Y_RNA.221-201ENST00000364248 96 ntBASIC2.6□□□□□ -1.99
NEUROD4Q9HD90 AL139132.1-201ENST00000431587 344 ntBASIC2.6□□□□□ -1.99
NEUROD4Q9HD90 RNU1-98P-201ENST00000458992 160 ntBASIC2.6□□□□□ -1.99
NEUROD4Q9HD90 RNU7-43P-201ENST00000516554 64 ntBASIC2.6□□□□□ -1.99
NEUROD4Q9HD90 MIR4319-201ENST00000577285 85 ntBASIC2.6□□□□□ -1.99
NEUROD4Q9HD90 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.6□□□□□ -1.99
NEUROD4Q9HD90 MIR548BB-201ENST00000626714 66 ntBASIC2.6□□□□□ -1.99
NEUROD4Q9HD90 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
NEUROD4Q9HD90 RNU6-1244P-201ENST00000363614 108 ntBASIC2.59□□□□□ -1.99
NEUROD4Q9HD90 RNU1-138P-201ENST00000384093 164 ntBASIC2.59□□□□□ -1.99
NEUROD4Q9HD90 MIR520C-201ENST00000385005 87 ntBASIC2.59□□□□□ -1.99
NEUROD4Q9HD90 RNU6-360P-201ENST00000390944 104 ntBASIC2.59□□□□□ -1.99
NEUROD4Q9HD90 RNU6-613P-201ENST00000410412 108 ntBASIC2.59□□□□□ -1.99
NEUROD4Q9HD90 Y_RNA.611-201ENST00000410682 108 ntBASIC2.59□□□□□ -1.99
NEUROD4Q9HD90 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.59□□□□□ -1.99
NEUROD4Q9HD90 RPS29P28-201ENST00000446439 141 ntBASIC2.59□□□□□ -1.99
NEUROD4Q9HD90 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -2
NEUROD4Q9HD90 RNU4-82P-201ENST00000362443 140 ntBASIC2.58□□□□□ -2
NEUROD4Q9HD90 Y_RNA.567-201ENST00000384736 106 ntBASIC2.58□□□□□ -2
NEUROD4Q9HD90 RNU6-1237P-201ENST00000384777 107 ntBASIC2.58□□□□□ -2
NEUROD4Q9HD90 MIR548G-201ENST00000408442 89 ntBASIC2.58□□□□□ -2
NEUROD4Q9HD90 Y_RNA.609-201ENST00000410669 89 ntBASIC2.58□□□□□ -2
NEUROD4Q9HD90 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.58□□□□□ -2
NEUROD4Q9HD90 RNA5SP445-201ENST00000515889 115 ntBASIC2.58□□□□□ -2
NEUROD4Q9HD90 RNU7-41P-201ENST00000515917 61 ntBASIC2.58□□□□□ -2
NEUROD4Q9HD90 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NEUROD4Q9HD90 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.58□□□□□ -2
NEUROD4Q9HD90 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NEUROD4Q9HD90 AC005336.3-201ENST00000623833 2679 ntBASIC2.57□□□□□ -2
NEUROD4Q9HD90 RNU6-509P-201ENST00000363519 107 ntBASIC2.57□□□□□ -2
NEUROD4Q9HD90 Y_RNA.354-201ENST00000365448 111 ntBASIC2.57□□□□□ -2
NEUROD4Q9HD90 MIR194-1-201ENST00000384892 85 ntBASIC2.57□□□□□ -2
NEUROD4Q9HD90 AL023284.1-201ENST00000403956 276 ntBASIC2.57□□□□□ -2
NEUROD4Q9HD90 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.57□□□□□ -2
NEUROD4Q9HD90 RPL31P63-201ENST00000422565 375 ntBASIC2.57□□□□□ -2
NEUROD4Q9HD90 RNU6-857P-201ENST00000515893 110 ntBASIC2.57□□□□□ -2
NEUROD4Q9HD90 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.57□□□□□ -2
NEUROD4Q9HD90 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.57□□□□□ -2
NEUROD4Q9HD90 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.57□□□□□ -2
NEUROD4Q9HD90 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.57□□□□□ -2
NEUROD4Q9HD90 RNA5SP432-201ENST00000362480 116 ntBASIC2.56□□□□□ -2
NEUROD4Q9HD90 RNU6-633P-201ENST00000362612 103 ntBASIC2.56□□□□□ -2
NEUROD4Q9HD90 SNORD114-10-201ENST00000363409 72 ntBASIC2.56□□□□□ -2
NEUROD4Q9HD90 RNY1P13-201ENST00000365030 105 ntBASIC2.56□□□□□ -2
NEUROD4Q9HD90 Y_RNA.426-201ENST00000384068 113 ntBASIC2.56□□□□□ -2
NEUROD4Q9HD90 MIR1261-201ENST00000408659 82 ntBASIC2.56□□□□□ -2
NEUROD4Q9HD90 RNA5SP21-201ENST00000410917 96 ntBASIC2.56□□□□□ -2
NEUROD4Q9HD90 RNU6-90P-201ENST00000606352 106 ntBASIC2.56□□□□□ -2
NEUROD4Q9HD90 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.56□□□□□ -2
NEUROD4Q9HD90 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
NEUROD4Q9HD90 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
NEUROD4Q9HD90 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.56□□□□□ -2
NEUROD4Q9HD90 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NEUROD4Q9HD90 Y_RNA.173-201ENST00000363776 113 ntBASIC2.55□□□□□ -2
NEUROD4Q9HD90 SNORD115-27-201ENST00000364430 82 ntBASIC2.55□□□□□ -2
NEUROD4Q9HD90 RNU6-865P-201ENST00000364772 107 ntBASIC2.55□□□□□ -2
NEUROD4Q9HD90 MIR196B-201ENST00000384852 84 ntBASIC2.55□□□□□ -2
NEUROD4Q9HD90 AC087499.2-201ENST00000432861 149 ntBASIC2.55□□□□□ -2
NEUROD4Q9HD90 AL773524.1-201ENST00000614065 229 ntBASIC2.55□□□□□ -2
NEUROD4Q9HD90 MIR6733-201ENST00000635723 61 ntBASIC2.55□□□□□ -2
NEUROD4Q9HD90 FO624990.1-201ENST00000636373 85 ntBASIC2.55□□□□□ -2
NEUROD4Q9HD90 Z82195.2-201ENST00000612348 18351 ntBASIC2.54□□□□□ -2
NEUROD4Q9HD90 AC062016.1-201ENST00000355719 319 ntBASIC2.54□□□□□ -2
NEUROD4Q9HD90 SNORA16B-201ENST00000364674 135 ntBASIC2.54□□□□□ -2
NEUROD4Q9HD90 MIR653-201ENST00000385279 96 ntBASIC2.54□□□□□ -2
NEUROD4Q9HD90 AL138827.1-201ENST00000402666 306 ntBASIC2.54□□□□□ -2
NEUROD4Q9HD90 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.54□□□□□ -2
NEUROD4Q9HD90 CYP3A52P-201ENST00000563326 91 ntBASIC2.54□□□□□ -2
NEUROD4Q9HD90 MIR4251-201ENST00000635819 61 ntBASIC2.54□□□□□ -2
NEUROD4Q9HD90 RNU6-1123P-201ENST00000362347 106 ntBASIC2.53□□□□□ -2
NEUROD4Q9HD90 RNU6-652P-201ENST00000365488 107 ntBASIC2.53□□□□□ -2
NEUROD4Q9HD90 AC004965.1-201ENST00000413033 213 ntBASIC2.53□□□□□ -2
NEUROD4Q9HD90 SPINT5P-201ENST00000448174 155 ntBASIC2.53□□□□□ -2
NEUROD4Q9HD90 RNU7-48P-201ENST00000458875 63 ntBASIC2.53□□□□□ -2
NEUROD4Q9HD90 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.53□□□□□ -2
NEUROD4Q9HD90 SNORA31.15-201ENST00000516771 132 ntBASIC2.53□□□□□ -2
NEUROD4Q9HD90 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.53□□□□□ -2
NEUROD4Q9HD90 MIR4635-201ENST00000583759 79 ntBASIC2.53□□□□□ -2
NEUROD4Q9HD90 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.53□□□□□ -2
NEUROD4Q9HD90 AC012676.2-201ENST00000619258 186 ntBASIC2.53□□□□□ -2
NEUROD4Q9HD90 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
NEUROD4Q9HD90 RNA5SP276-201ENST00000362580 94 ntBASIC2.52□□□□□ -2.01
NEUROD4Q9HD90 MIR9-1-201ENST00000385198 89 ntBASIC2.52□□□□□ -2.01
NEUROD4Q9HD90 AC244023.1-201ENST00000426884 112 ntBASIC2.52□□□□□ -2.01
NEUROD4Q9HD90 AC079600.2-201ENST00000550076 130 ntBASIC2.52□□□□□ -2.01
NEUROD4Q9HD90 AL513043.2-201ENST00000573941 143 ntBASIC2.52□□□□□ -2.01
NEUROD4Q9HD90 AC242498.1-201ENST00000604134 111 ntBASIC2.52□□□□□ -2.01
NEUROD4Q9HD90 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NEUROD4Q9HD90 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
NEUROD4Q9HD90 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms