Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AL512310.12-203ENST00000640543 90 ntBASIC1.92□□□□□ -2.1
SEC61A2Q9H9S3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
SEC61A2Q9H9S3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
SEC61A2Q9H9S3 AL596028.1-201ENST00000326971 197 ntBASIC1.91□□□□□ -2.1
SEC61A2Q9H9S3 Y_RNA.10-201ENST00000362371 110 ntBASIC1.91□□□□□ -2.1
SEC61A2Q9H9S3 U8.2-201ENST00000363156 134 ntBASIC1.91□□□□□ -2.1
SEC61A2Q9H9S3 SNORA16B-201ENST00000364674 135 ntBASIC1.91□□□□□ -2.1
SEC61A2Q9H9S3 RNA5SP173-201ENST00000364857 136 ntBASIC1.91□□□□□ -2.1
SEC61A2Q9H9S3 Y_RNA.290-201ENST00000364879 114 ntBASIC1.91□□□□□ -2.1
SEC61A2Q9H9S3 Y_RNA.430-201ENST00000384081 110 ntBASIC1.91□□□□□ -2.1
SEC61A2Q9H9S3 Y_RNA.466-201ENST00000384294 113 ntBASIC1.91□□□□□ -2.1
SEC61A2Q9H9S3 AL023284.1-201ENST00000403956 276 ntBASIC1.91□□□□□ -2.1
SEC61A2Q9H9S3 AC245047.7-201ENST00000440265 293 ntBASIC1.91□□□□□ -2.1
SEC61A2Q9H9S3 Y_RNA.659-201ENST00000515994 113 ntBASIC1.91□□□□□ -2.1
SEC61A2Q9H9S3 AC026421.1-201ENST00000519101 163 ntBASIC1.91□□□□□ -2.1
SEC61A2Q9H9S3 DEFB122-202ENST00000569013 197 ntBASIC1.91□□□□□ -2.1
SEC61A2Q9H9S3 MIR3945-201ENST00000581853 98 ntBASIC1.91□□□□□ -2.1
SEC61A2Q9H9S3 MIR4298-201ENST00000584380 73 ntBASIC1.91□□□□□ -2.1
SEC61A2Q9H9S3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SEC61A2Q9H9S3 MIR494-201ENST00000349529 81 ntBASIC1.9□□□□□ -2.11
SEC61A2Q9H9S3 RNA5SP276-201ENST00000362580 94 ntBASIC1.9□□□□□ -2.11
SEC61A2Q9H9S3 SNORA70B-201ENST00000384210 135 ntBASIC1.9□□□□□ -2.11
SEC61A2Q9H9S3 SNORA67.3-201ENST00000384366 140 ntBASIC1.9□□□□□ -2.11
SEC61A2Q9H9S3 SNORA18-201ENST00000384416 132 ntBASIC1.9□□□□□ -2.11
SEC61A2Q9H9S3 SNORA64-201ENST00000384674 134 ntBASIC1.9□□□□□ -2.11
SEC61A2Q9H9S3 SNORA48.3-201ENST00000391081 134 ntBASIC1.9□□□□□ -2.11
SEC61A2Q9H9S3 RNA5SP425-201ENST00000410336 112 ntBASIC1.9□□□□□ -2.11
SEC61A2Q9H9S3 snoU13.16-201ENST00000459350 104 ntBASIC1.9□□□□□ -2.11
SEC61A2Q9H9S3 MIR4529-201ENST00000578110 78 ntBASIC1.9□□□□□ -2.11
SEC61A2Q9H9S3 MIR4764-201ENST00000580680 88 ntBASIC1.9□□□□□ -2.11
SEC61A2Q9H9S3 MIR4448-201ENST00000584360 86 ntBASIC1.9□□□□□ -2.11
SEC61A2Q9H9S3 U7.3-201ENST00000616123 62 ntBASIC1.9□□□□□ -2.11
SEC61A2Q9H9S3 AC008133.2-201ENST00000624540 351 ntBASIC1.9□□□□□ -2.11
SEC61A2Q9H9S3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.9□□□□□ -2.11
SEC61A2Q9H9S3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.9□□□□□ -2.11
SEC61A2Q9H9S3 RNA5SP138-201ENST00000365098 114 ntBASIC1.89□□□□□ -2.11
SEC61A2Q9H9S3 RNU6-573P-201ENST00000383938 106 ntBASIC1.89□□□□□ -2.11
SEC61A2Q9H9S3 RNU6-1201P-201ENST00000384227 107 ntBASIC1.89□□□□□ -2.11
SEC61A2Q9H9S3 MIR520C-201ENST00000385005 87 ntBASIC1.89□□□□□ -2.11
SEC61A2Q9H9S3 AC004941.2-201ENST00000427009 228 ntBASIC1.89□□□□□ -2.11
SEC61A2Q9H9S3 AL356320.1-201ENST00000429616 163 ntBASIC1.89□□□□□ -2.11
SEC61A2Q9H9S3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SEC61A2Q9H9S3 AC022254.1-201ENST00000567857 235 ntBASIC1.89□□□□□ -2.11
SEC61A2Q9H9S3 MIR1273D-201ENST00000577266 86 ntBASIC1.89□□□□□ -2.11
SEC61A2Q9H9S3 MIR8055-201ENST00000610739 97 ntBASIC1.89□□□□□ -2.11
SEC61A2Q9H9S3 RNU6-360P-201ENST00000390944 104 ntBASIC1.88□□□□□ -2.11
SEC61A2Q9H9S3 RNU6-717P-201ENST00000459076 104 ntBASIC1.88□□□□□ -2.11
SEC61A2Q9H9S3 MIR4777-201ENST00000583710 86 ntBASIC1.88□□□□□ -2.11
SEC61A2Q9H9S3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.88□□□□□ -2.11
SEC61A2Q9H9S3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SEC61A2Q9H9S3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SEC61A2Q9H9S3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SEC61A2Q9H9S3 RNY1P10-201ENST00000363268 113 ntBASIC1.87□□□□□ -2.11
SEC61A2Q9H9S3 RNU6-60P-201ENST00000364792 103 ntBASIC1.87□□□□□ -2.11
SEC61A2Q9H9S3 SNORA6-201ENST00000384033 151 ntBASIC1.87□□□□□ -2.11
SEC61A2Q9H9S3 Y_RNA.467-201ENST00000384297 102 ntBASIC1.87□□□□□ -2.11
SEC61A2Q9H9S3 RNU6-1237P-201ENST00000384777 107 ntBASIC1.87□□□□□ -2.11
SEC61A2Q9H9S3 MIR450A2-201ENST00000385022 100 ntBASIC1.87□□□□□ -2.11
SEC61A2Q9H9S3 SNORD23.1-201ENST00000408212 104 ntBASIC1.87□□□□□ -2.11
SEC61A2Q9H9S3 RNA5SP338-201ENST00000410495 85 ntBASIC1.87□□□□□ -2.11
SEC61A2Q9H9S3 RNU6-592P-201ENST00000411333 103 ntBASIC1.87□□□□□ -2.11
SEC61A2Q9H9S3 BTF3P4-201ENST00000418852 495 ntBASIC1.87□□□□□ -2.11
SEC61A2Q9H9S3 RN7SKP12-201ENST00000516275 143 ntBASIC1.87□□□□□ -2.11
SEC61A2Q9H9S3 RNU7-43P-201ENST00000516554 64 ntBASIC1.87□□□□□ -2.11
SEC61A2Q9H9S3 RNU1-40P-201ENST00000516816 164 ntBASIC1.87□□□□□ -2.11
SEC61A2Q9H9S3 RNU1-97P-201ENST00000516872 164 ntBASIC1.87□□□□□ -2.11
SEC61A2Q9H9S3 MIR548AO-201ENST00000579992 96 ntBASIC1.87□□□□□ -2.11
SEC61A2Q9H9S3 SNORD45B-201ENST00000364617 72 ntBASIC1.86□□□□□ -2.11
SEC61A2Q9H9S3 RNU6-439P-201ENST00000384188 106 ntBASIC1.86□□□□□ -2.11
SEC61A2Q9H9S3 RNU6-602P-201ENST00000411155 105 ntBASIC1.86□□□□□ -2.11
SEC61A2Q9H9S3 AC090844.1-201ENST00000422019 156 ntBASIC1.86□□□□□ -2.11
SEC61A2Q9H9S3 RNU7-41P-201ENST00000515917 61 ntBASIC1.86□□□□□ -2.11
SEC61A2Q9H9S3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.86□□□□□ -2.11
SEC61A2Q9H9S3 MIR8065-201ENST00000620577 100 ntBASIC1.86□□□□□ -2.11
SEC61A2Q9H9S3 uc_338.20-201ENST00000621563 178 ntBASIC1.86□□□□□ -2.11
SEC61A2Q9H9S3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.86□□□□□ -2.11
SEC61A2Q9H9S3 RNU6-1123P-201ENST00000362347 106 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 Y_RNA.17-201ENST00000362433 111 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 Y_RNA.247-201ENST00000364500 92 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 SNORD115-35-201ENST00000365122 82 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 RNA5SP259-201ENST00000365541 109 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 MIR206-201ENST00000384872 86 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 RNU6-1307P-201ENST00000391012 103 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 AC019129.1-201ENST00000403786 261 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 MIR1261-201ENST00000408659 82 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 Y_RNA.593-201ENST00000410292 98 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 RNU2-40P-201ENST00000410833 196 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 RNU6-1086P-201ENST00000410930 100 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 AC004965.1-201ENST00000413033 213 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 AC025033.1-201ENST00000463883 194 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 AC055731.1-201ENST00000474387 401 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 UBL5P1-201ENST00000507979 193 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 AC108729.3-201ENST00000513484 108 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 RNU7-2P-201ENST00000516096 62 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 RNU6-1018P-201ENST00000516577 106 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 RNA5SP364-201ENST00000516938 78 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 CYP3A52P-201ENST00000563326 91 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms