Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 SNORD115-9-201ENST00000362912 82 ntBASIC2.12□□□□□ -2.07
VPS11Q9H270 SNORD115-21-201ENST00000362963 81 ntBASIC2.12□□□□□ -2.07
VPS11Q9H270 SNORD115-14-201ENST00000363090 81 ntBASIC2.12□□□□□ -2.07
VPS11Q9H270 SNORD115-41-201ENST00000363608 82 ntBASIC2.12□□□□□ -2.07
VPS11Q9H270 SNORD115-11-201ENST00000363616 82 ntBASIC2.12□□□□□ -2.07
VPS11Q9H270 SNORD115-5-201ENST00000363633 82 ntBASIC2.12□□□□□ -2.07
VPS11Q9H270 SNORD115-39-201ENST00000363694 82 ntBASIC2.12□□□□□ -2.07
VPS11Q9H270 SNORD115-4-201ENST00000363810 82 ntBASIC2.12□□□□□ -2.07
VPS11Q9H270 SNORD115-6-201ENST00000363942 82 ntBASIC2.12□□□□□ -2.07
VPS11Q9H270 SNORD115-42-201ENST00000364273 82 ntBASIC2.12□□□□□ -2.07
VPS11Q9H270 Y_RNA.247-201ENST00000364500 92 ntBASIC2.12□□□□□ -2.07
VPS11Q9H270 SNORD115-15-201ENST00000364809 81 ntBASIC2.12□□□□□ -2.07
VPS11Q9H270 RNA5SP160-201ENST00000364866 120 ntBASIC2.12□□□□□ -2.07
VPS11Q9H270 SNORD115-26-201ENST00000365067 82 ntBASIC2.12□□□□□ -2.07
VPS11Q9H270 SNORD115-10-201ENST00000365073 81 ntBASIC2.12□□□□□ -2.07
VPS11Q9H270 SNORD115-20-201ENST00000365099 82 ntBASIC2.12□□□□□ -2.07
VPS11Q9H270 SNORD115-43-201ENST00000365503 82 ntBASIC2.12□□□□□ -2.07
VPS11Q9H270 SNORD115-36-201ENST00000365629 82 ntBASIC2.12□□□□□ -2.07
VPS11Q9H270 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
VPS11Q9H270 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS11Q9H270 Y_RNA.659-201ENST00000515994 113 ntBASIC2.12□□□□□ -2.07
VPS11Q9H270 Y_RNA.705-201ENST00000516862 110 ntBASIC2.12□□□□□ -2.07
VPS11Q9H270 RNA5SP437-201ENST00000517249 129 ntBASIC2.12□□□□□ -2.07
VPS11Q9H270 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS11Q9H270 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
VPS11Q9H270 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
VPS11Q9H270 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
VPS11Q9H270 Y_RNA.191-201ENST00000363972 113 ntBASIC2.11□□□□□ -2.07
VPS11Q9H270 RNY1P4-201ENST00000384595 115 ntBASIC2.11□□□□□ -2.07
VPS11Q9H270 SNORA26.6-201ENST00000391256 115 ntBASIC2.11□□□□□ -2.07
VPS11Q9H270 RNU6-1190P-201ENST00000410811 104 ntBASIC2.11□□□□□ -2.07
VPS11Q9H270 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS11Q9H270 STAG3L5P-204ENST00000443759 179 ntBASIC2.11□□□□□ -2.07
VPS11Q9H270 RNU7-113P-201ENST00000459273 62 ntBASIC2.11□□□□□ -2.07
VPS11Q9H270 SNORA31.10-201ENST00000516482 106 ntBASIC2.11□□□□□ -2.07
VPS11Q9H270 RNU6-1018P-201ENST00000516577 106 ntBASIC2.11□□□□□ -2.07
VPS11Q9H270 SCARNA16.3-201ENST00000516595 184 ntBASIC2.11□□□□□ -2.07
VPS11Q9H270 MIR4435-1-201ENST00000582552 80 ntBASIC2.11□□□□□ -2.07
VPS11Q9H270 MIR3935-201ENST00000583472 104 ntBASIC2.11□□□□□ -2.07
VPS11Q9H270 MIR4448-201ENST00000584360 86 ntBASIC2.11□□□□□ -2.07
VPS11Q9H270 Y_RNA.4-201ENST00000362333 112 ntBASIC2.1□□□□□ -2.07
VPS11Q9H270 RNU6-1313P-201ENST00000362622 102 ntBASIC2.1□□□□□ -2.07
VPS11Q9H270 SNORD38C-201ENST00000384381 69 ntBASIC2.1□□□□□ -2.07
VPS11Q9H270 RNU6-24P-201ENST00000384440 107 ntBASIC2.1□□□□□ -2.07
VPS11Q9H270 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
VPS11Q9H270 RNA5SP508-201ENST00000411327 119 ntBASIC2.1□□□□□ -2.07
VPS11Q9H270 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.1□□□□□ -2.07
VPS11Q9H270 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.1□□□□□ -2.07
VPS11Q9H270 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
VPS11Q9H270 Y_RNA.299-201ENST00000364973 94 ntBASIC2.09□□□□□ -2.07
VPS11Q9H270 RNU6-163P-201ENST00000384396 106 ntBASIC2.09□□□□□ -2.07
VPS11Q9H270 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
VPS11Q9H270 RNU6-1319P-201ENST00000390855 104 ntBASIC2.09□□□□□ -2.07
VPS11Q9H270 RNU6-747P-201ENST00000390928 104 ntBASIC2.09□□□□□ -2.07
VPS11Q9H270 RNU6-360P-201ENST00000390944 104 ntBASIC2.09□□□□□ -2.07
VPS11Q9H270 U8.15-201ENST00000390947 134 ntBASIC2.09□□□□□ -2.07
VPS11Q9H270 RNU6-1307P-201ENST00000391012 103 ntBASIC2.09□□□□□ -2.07
VPS11Q9H270 RNU6-241P-201ENST00000391148 104 ntBASIC2.09□□□□□ -2.07
VPS11Q9H270 RNU6-177P-201ENST00000411257 104 ntBASIC2.09□□□□□ -2.07
VPS11Q9H270 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.09□□□□□ -2.07
VPS11Q9H270 HMGN2P19-201ENST00000425149 265 ntBASIC2.09□□□□□ -2.07
VPS11Q9H270 AC015922.2-201ENST00000435593 184 ntBASIC2.09□□□□□ -2.07
VPS11Q9H270 HSPE1P9-201ENST00000440046 311 ntBASIC2.09□□□□□ -2.07
VPS11Q9H270 AC139453.2-201ENST00000487255 133 ntBASIC2.09□□□□□ -2.07
VPS11Q9H270 UBL5P1-201ENST00000507979 193 ntBASIC2.09□□□□□ -2.07
VPS11Q9H270 RNU7-28P-201ENST00000516759 62 ntBASIC2.09□□□□□ -2.07
VPS11Q9H270 RNU6-1006P-201ENST00000516998 103 ntBASIC2.09□□□□□ -2.07
VPS11Q9H270 MIR376B-201ENST00000614515 100 ntBASIC2.09□□□□□ -2.07
VPS11Q9H270 MIR8054-201ENST00000620877 86 ntBASIC2.09□□□□□ -2.07
VPS11Q9H270 MIR548BB-201ENST00000626714 66 ntBASIC2.09□□□□□ -2.07
VPS11Q9H270 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
VPS11Q9H270 SNORA22.1-201ENST00000362701 134 ntBASIC2.08□□□□□ -2.08
VPS11Q9H270 RNU6-776P-201ENST00000364403 104 ntBASIC2.08□□□□□ -2.08
VPS11Q9H270 RNU6-1022P-201ENST00000365049 104 ntBASIC2.08□□□□□ -2.08
VPS11Q9H270 SNORD58A-201ENST00000383875 65 ntBASIC2.08□□□□□ -2.08
VPS11Q9H270 RNU6-950P-201ENST00000384651 107 ntBASIC2.08□□□□□ -2.08
VPS11Q9H270 SUMO2P12-201ENST00000405924 140 ntBASIC2.08□□□□□ -2.08
VPS11Q9H270 Y_RNA.611-201ENST00000410682 108 ntBASIC2.08□□□□□ -2.08
VPS11Q9H270 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.08□□□□□ -2.08
VPS11Q9H270 AC090844.1-201ENST00000422019 156 ntBASIC2.08□□□□□ -2.08
VPS11Q9H270 RPL23AP42-201ENST00000471152 471 ntBASIC2.08□□□□□ -2.08
VPS11Q9H270 AC019288.1-201ENST00000557918 224 ntBASIC2.08□□□□□ -2.08
VPS11Q9H270 SEPT14P17-201ENST00000617978 177 ntBASIC2.08□□□□□ -2.08
VPS11Q9H270 RNU6-509P-201ENST00000363519 107 ntBASIC2.07□□□□□ -2.08
VPS11Q9H270 SNORD116-10-201ENST00000363791 102 ntBASIC2.07□□□□□ -2.08
VPS11Q9H270 RNA5SP126-201ENST00000365092 109 ntBASIC2.07□□□□□ -2.08
VPS11Q9H270 RNU6-652P-201ENST00000365488 107 ntBASIC2.07□□□□□ -2.08
VPS11Q9H270 Y_RNA.426-201ENST00000384068 113 ntBASIC2.07□□□□□ -2.08
VPS11Q9H270 MIR676-201ENST00000390702 67 ntBASIC2.07□□□□□ -2.08
VPS11Q9H270 RN7SKP192-201ENST00000411291 327 ntBASIC2.07□□□□□ -2.08
VPS11Q9H270 AC008413.1-201ENST00000511864 177 ntBASIC2.07□□□□□ -2.08
VPS11Q9H270 RNA5SP33-201ENST00000516687 98 ntBASIC2.07□□□□□ -2.08
VPS11Q9H270 AC103810.8-201ENST00000607347 118 ntBASIC2.07□□□□□ -2.08
VPS11Q9H270 AC103810.7-201ENST00000607821 91 ntBASIC2.07□□□□□ -2.08
VPS11Q9H270 AC027279.3-201ENST00000625055 122 ntBASIC2.07□□□□□ -2.08
VPS11Q9H270 Y_RNA.94-201ENST00000363068 106 ntBASIC2.06□□□□□ -2.08
VPS11Q9H270 Y_RNA.96-201ENST00000363092 109 ntBASIC2.06□□□□□ -2.08
VPS11Q9H270 RNU6-1163P-201ENST00000364516 107 ntBASIC2.06□□□□□ -2.08
VPS11Q9H270 SNORA1.1-201ENST00000364671 133 ntBASIC2.06□□□□□ -2.08
VPS11Q9H270 SNORA32-201ENST00000384072 121 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 174.9 ms