Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.43□□□□□ -2.48
UPK3BQ9BT76 AL442067.1-201ENST00000613261 223 ntBASIC-0.43□□□□□ -2.48
UPK3BQ9BT76 RNU6-726P-201ENST00000364680 107 ntBASIC-0.44□□□□□ -2.48
UPK3BQ9BT76 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.44□□□□□ -2.48
UPK3BQ9BT76 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.44□□□□□ -2.48
UPK3BQ9BT76 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.44□□□□□ -2.48
UPK3BQ9BT76 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.44□□□□□ -2.48
UPK3BQ9BT76 RNU6-35P-201ENST00000384530 107 ntBASIC-0.44□□□□□ -2.48
UPK3BQ9BT76 SNORA20-201ENST00000384662 132 ntBASIC-0.44□□□□□ -2.48
UPK3BQ9BT76 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.44□□□□□ -2.48
UPK3BQ9BT76 HMGN2P22-201ENST00000427588 175 ntBASIC-0.44□□□□□ -2.48
UPK3BQ9BT76 SNORA20.3-201ENST00000516880 132 ntBASIC-0.44□□□□□ -2.48
UPK3BQ9BT76 DEFB131E-201ENST00000532329 154 ntBASIC-0.44□□□□□ -2.48
UPK3BQ9BT76 AL670379.3-201ENST00000605040 251 ntBASIC-0.44□□□□□ -2.48
UPK3BQ9BT76 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.44□□□□□ -2.48
UPK3BQ9BT76 MTND4LP32-201ENST00000636111 270 ntBASIC-0.44□□□□□ -2.48
UPK3BQ9BT76 AC073869.6-201ENST00000640656 341 ntBASIC-0.44□□□□□ -2.48
UPK3BQ9BT76 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.45□□□□□ -2.48
UPK3BQ9BT76 SNORD113-8-201ENST00000363497 74 ntBASIC-0.45□□□□□ -2.48
UPK3BQ9BT76 RNA5SP245-201ENST00000364239 121 ntBASIC-0.45□□□□□ -2.48
UPK3BQ9BT76 SNORA22B-201ENST00000383876 138 ntBASIC-0.45□□□□□ -2.48
UPK3BQ9BT76 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.45□□□□□ -2.48
UPK3BQ9BT76 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.45□□□□□ -2.48
UPK3BQ9BT76 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.45□□□□□ -2.48
UPK3BQ9BT76 MIR5688-201ENST00000580619 83 ntBASIC-0.45□□□□□ -2.48
UPK3BQ9BT76 MIR4493-201ENST00000584016 73 ntBASIC-0.45□□□□□ -2.48
UPK3BQ9BT76 AL606534.2-204ENST00000635008 178 ntBASIC-0.45□□□□□ -2.48
UPK3BQ9BT76 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.46□□□□□ -2.48
UPK3BQ9BT76 SNORD115-24-201ENST00000363528 82 ntBASIC-0.46□□□□□ -2.48
UPK3BQ9BT76 SNORD14C-201ENST00000365382 88 ntBASIC-0.46□□□□□ -2.48
UPK3BQ9BT76 MIR526A2-201ENST00000390198 65 ntBASIC-0.46□□□□□ -2.48
UPK3BQ9BT76 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.46□□□□□ -2.48
UPK3BQ9BT76 RNU2-55P-201ENST00000411146 174 ntBASIC-0.46□□□□□ -2.48
UPK3BQ9BT76 AL589823.1-201ENST00000429577 183 ntBASIC-0.46□□□□□ -2.48
UPK3BQ9BT76 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.46□□□□□ -2.48
UPK3BQ9BT76 AC138749.4-201ENST00000563970 127 ntBASIC-0.46□□□□□ -2.48
UPK3BQ9BT76 AC006006.1-201ENST00000603082 144 ntBASIC-0.46□□□□□ -2.48
UPK3BQ9BT76 MIR3666-201ENST00000607845 111 ntBASIC-0.46□□□□□ -2.48
UPK3BQ9BT76 SNORA70.25-201ENST00000612741 95 ntBASIC-0.46□□□□□ -2.48
UPK3BQ9BT76 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.46□□□□□ -2.48
UPK3BQ9BT76 AL162376.1-201ENST00000624117 175 ntBASIC-0.46□□□□□ -2.48
UPK3BQ9BT76 MIR101-1-201ENST00000362265 75 ntBASIC-0.47□□□□□ -2.48
UPK3BQ9BT76 RNU4-58P-201ENST00000363192 141 ntBASIC-0.47□□□□□ -2.48
UPK3BQ9BT76 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.47□□□□□ -2.48
UPK3BQ9BT76 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.47□□□□□ -2.48
UPK3BQ9BT76 SNORA75.1-201ENST00000391130 148 ntBASIC-0.47□□□□□ -2.48
UPK3BQ9BT76 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.47□□□□□ -2.48
UPK3BQ9BT76 MTND4LP11-201ENST00000422184 280 ntBASIC-0.47□□□□□ -2.48
UPK3BQ9BT76 PMCHL1-202ENST00000423102 261 ntBASIC-0.47□□□□□ -2.48
UPK3BQ9BT76 MTATP6P26-201ENST00000445926 662 ntBASIC-0.47□□□□□ -2.48
UPK3BQ9BT76 RNU6-507P-201ENST00000516045 100 ntBASIC-0.47□□□□□ -2.48
UPK3BQ9BT76 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.47□□□□□ -2.48
UPK3BQ9BT76 CR383656.4-201ENST00000546909 122 ntBASIC-0.47□□□□□ -2.48
UPK3BQ9BT76 MIR378D2-201ENST00000580636 98 ntBASIC-0.47□□□□□ -2.48
UPK3BQ9BT76 MIR3925-201ENST00000584674 77 ntBASIC-0.47□□□□□ -2.48
UPK3BQ9BT76 AC006157.1-201ENST00000611750 366 ntBASIC-0.47□□□□□ -2.48
UPK3BQ9BT76 AC007485.1-201ENST00000616755 206 ntBASIC-0.47□□□□□ -2.48
UPK3BQ9BT76 uc_338.36-201ENST00000622331 158 ntBASIC-0.47□□□□□ -2.48
UPK3BQ9BT76 MIR6514-201ENST00000622549 70 ntBASIC-0.47□□□□□ -2.48
UPK3BQ9BT76 MIR101-2-201ENST00000362195 79 ntBASIC-0.48□□□□□ -2.49
UPK3BQ9BT76 SNORA22.1-201ENST00000362701 134 ntBASIC-0.48□□□□□ -2.49
UPK3BQ9BT76 RNU4-90P-201ENST00000362773 141 ntBASIC-0.48□□□□□ -2.49
UPK3BQ9BT76 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.48□□□□□ -2.49
UPK3BQ9BT76 SNORA63.5-201ENST00000363548 123 ntBASIC-0.48□□□□□ -2.49
UPK3BQ9BT76 RNY1P13-201ENST00000365030 105 ntBASIC-0.48□□□□□ -2.49
UPK3BQ9BT76 RNU1-115P-201ENST00000365329 160 ntBASIC-0.48□□□□□ -2.49
UPK3BQ9BT76 SNORA18-201ENST00000384416 132 ntBASIC-0.48□□□□□ -2.49
UPK3BQ9BT76 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
UPK3BQ9BT76 RNY4P36-201ENST00000391116 96 ntBASIC-0.48□□□□□ -2.49
UPK3BQ9BT76 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.48□□□□□ -2.49
UPK3BQ9BT76 RNA5SP451-201ENST00000410588 110 ntBASIC-0.48□□□□□ -2.49
UPK3BQ9BT76 RNU6-758P-201ENST00000516292 89 ntBASIC-0.48□□□□□ -2.49
UPK3BQ9BT76 RNU6-531P-201ENST00000516694 104 ntBASIC-0.48□□□□□ -2.49
UPK3BQ9BT76 MIR4677-201ENST00000584153 80 ntBASIC-0.48□□□□□ -2.49
UPK3BQ9BT76 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.48□□□□□ -2.49
UPK3BQ9BT76 MIR548AZ-201ENST00000616567 95 ntBASIC-0.48□□□□□ -2.49
UPK3BQ9BT76 AC091932.4-201ENST00000623386 200 ntBASIC-0.48□□□□□ -2.49
UPK3BQ9BT76 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.49□□□□□ -2.49
UPK3BQ9BT76 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.49□□□□□ -2.49
UPK3BQ9BT76 Y_RNA.318-201ENST00000365131 97 ntBASIC-0.49□□□□□ -2.49
UPK3BQ9BT76 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.49□□□□□ -2.49
UPK3BQ9BT76 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.49□□□□□ -2.49
UPK3BQ9BT76 MIR604-201ENST00000384880 94 ntBASIC-0.49□□□□□ -2.49
UPK3BQ9BT76 RNU6-876P-201ENST00000391295 104 ntBASIC-0.49□□□□□ -2.49
UPK3BQ9BT76 MIR1265-201ENST00000408444 86 ntBASIC-0.49□□□□□ -2.49
UPK3BQ9BT76 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.49□□□□□ -2.49
UPK3BQ9BT76 RNU6-130P-201ENST00000411112 103 ntBASIC-0.49□□□□□ -2.49
UPK3BQ9BT76 RPL21P38-201ENST00000418090 167 ntBASIC-0.49□□□□□ -2.49
UPK3BQ9BT76 SNORD126-201ENST00000459475 77 ntBASIC-0.49□□□□□ -2.49
UPK3BQ9BT76 RNA5SP153-201ENST00000516498 76 ntBASIC-0.49□□□□□ -2.49
UPK3BQ9BT76 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.49□□□□□ -2.49
UPK3BQ9BT76 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.49□□□□□ -2.49
UPK3BQ9BT76 AC011921.3-201ENST00000605540 361 ntBASIC-0.49□□□□□ -2.49
UPK3BQ9BT76 AC084781.2-201ENST00000615568 161 ntBASIC-0.49□□□□□ -2.49
UPK3BQ9BT76 FTX_2.1-201ENST00000618816 94 ntBASIC-0.49□□□□□ -2.49
UPK3BQ9BT76 AC104985.2-201ENST00000620598 500 ntBASIC-0.49□□□□□ -2.49
UPK3BQ9BT76 AC073869.9-201ENST00000641610 120 ntBASIC-0.49□□□□□ -2.49
UPK3BQ9BT76 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.5□□□□□ -2.49
UPK3BQ9BT76 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.5□□□□□ -2.49
UPK3BQ9BT76 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms