Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 MIR6129-201ENST00000616087 109 ntBASIC1.28□□□□□ -2.2
HERPUD2Q9BSE4 AC008133.2-201ENST00000624540 351 ntBASIC1.28□□□□□ -2.2
HERPUD2Q9BSE4 MIR3914-2-201ENST00000637339 95 ntBASIC1.28□□□□□ -2.2
HERPUD2Q9BSE4 SNORA1.2-201ENST00000365189 134 ntBASIC1.27□□□□□ -2.21
HERPUD2Q9BSE4 SNORA75.2-201ENST00000391138 150 ntBASIC1.27□□□□□ -2.21
HERPUD2Q9BSE4 SNORA75.3-201ENST00000391231 150 ntBASIC1.27□□□□□ -2.21
HERPUD2Q9BSE4 RNU2-55P-201ENST00000411146 174 ntBASIC1.27□□□□□ -2.21
HERPUD2Q9BSE4 AL158147.1-201ENST00000443970 75 ntBASIC1.27□□□□□ -2.21
HERPUD2Q9BSE4 RPS26P48-201ENST00000491713 339 ntBASIC1.27□□□□□ -2.21
HERPUD2Q9BSE4 RNA5SP236-201ENST00000516169 116 ntBASIC1.27□□□□□ -2.21
HERPUD2Q9BSE4 AP001328.1-201ENST00000528550 176 ntBASIC1.27□□□□□ -2.21
HERPUD2Q9BSE4 MIR4781-201ENST00000585250 76 ntBASIC1.27□□□□□ -2.21
HERPUD2Q9BSE4 TUG1_4.1-201ENST00000619464 181 ntBASIC1.27□□□□□ -2.21
HERPUD2Q9BSE4 MIR4251-201ENST00000635819 61 ntBASIC1.27□□□□□ -2.21
HERPUD2Q9BSE4 AL442644.1-201ENST00000454390 3105 ntBASIC1.27□□□□□ -2.21
HERPUD2Q9BSE4 Y_RNA.114-201ENST00000363265 113 ntBASIC1.26□□□□□ -2.21
HERPUD2Q9BSE4 RNU6-1138P-201ENST00000365359 106 ntBASIC1.26□□□□□ -2.21
HERPUD2Q9BSE4 MIR539-201ENST00000365690 78 ntBASIC1.26□□□□□ -2.21
HERPUD2Q9BSE4 RNU6-1144P-201ENST00000384247 104 ntBASIC1.26□□□□□ -2.21
HERPUD2Q9BSE4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.26□□□□□ -2.21
HERPUD2Q9BSE4 MRPL35P3-201ENST00000421557 364 ntBASIC1.26□□□□□ -2.21
HERPUD2Q9BSE4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.26□□□□□ -2.21
HERPUD2Q9BSE4 OR2A41P-201ENST00000473586 105 ntBASIC1.26□□□□□ -2.21
HERPUD2Q9BSE4 PDCD5P2-201ENST00000507570 312 ntBASIC1.26□□□□□ -2.21
HERPUD2Q9BSE4 RNU6-772P-201ENST00000516042 105 ntBASIC1.26□□□□□ -2.21
HERPUD2Q9BSE4 U7.2-201ENST00000607576 63 ntBASIC1.26□□□□□ -2.21
HERPUD2Q9BSE4 AC011603.4-201ENST00000611325 277 ntBASIC1.26□□□□□ -2.21
HERPUD2Q9BSE4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.26□□□□□ -2.21
HERPUD2Q9BSE4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
HERPUD2Q9BSE4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.26□□□□□ -2.21
HERPUD2Q9BSE4 RNU6-834P-201ENST00000362367 110 ntBASIC1.25□□□□□ -2.21
HERPUD2Q9BSE4 Y_RNA.120-201ENST00000363304 110 ntBASIC1.25□□□□□ -2.21
HERPUD2Q9BSE4 RNU6-755P-201ENST00000364400 103 ntBASIC1.25□□□□□ -2.21
HERPUD2Q9BSE4 Y_RNA.521-201ENST00000384560 114 ntBASIC1.25□□□□□ -2.21
HERPUD2Q9BSE4 MIR200A-201ENST00000384875 90 ntBASIC1.25□□□□□ -2.21
HERPUD2Q9BSE4 SNORD28B-201ENST00000390993 75 ntBASIC1.25□□□□□ -2.21
HERPUD2Q9BSE4 SNORD37.2-201ENST00000391075 66 ntBASIC1.25□□□□□ -2.21
HERPUD2Q9BSE4 SNORD33.1-201ENST00000516213 88 ntBASIC1.25□□□□□ -2.21
HERPUD2Q9BSE4 RNA5SP153-201ENST00000516498 76 ntBASIC1.25□□□□□ -2.21
HERPUD2Q9BSE4 SCARNA15-202ENST00000516881 127 ntBASIC1.25□□□□□ -2.21
HERPUD2Q9BSE4 Y_RNA.709-201ENST00000516952 92 ntBASIC1.25□□□□□ -2.21
HERPUD2Q9BSE4 AL359881.1-201ENST00000602916 267 ntBASIC1.25□□□□□ -2.21
HERPUD2Q9BSE4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.25□□□□□ -2.21
HERPUD2Q9BSE4 AC012676.2-201ENST00000619258 186 ntBASIC1.25□□□□□ -2.21
HERPUD2Q9BSE4 Y_RNA.52-201ENST00000362760 96 ntBASIC1.24□□□□□ -2.21
HERPUD2Q9BSE4 Y_RNA.164-201ENST00000363709 102 ntBASIC1.24□□□□□ -2.21
HERPUD2Q9BSE4 SNORD114-24-201ENST00000365029 72 ntBASIC1.24□□□□□ -2.21
HERPUD2Q9BSE4 Y_RNA.370-201ENST00000365589 108 ntBASIC1.24□□□□□ -2.21
HERPUD2Q9BSE4 Y_RNA.432-201ENST00000384087 111 ntBASIC1.24□□□□□ -2.21
HERPUD2Q9BSE4 SNORD61-201ENST00000384252 73 ntBASIC1.24□□□□□ -2.21
HERPUD2Q9BSE4 RNU6-476P-201ENST00000384726 107 ntBASIC1.24□□□□□ -2.21
HERPUD2Q9BSE4 Y_RNA.584-201ENST00000391090 114 ntBASIC1.24□□□□□ -2.21
HERPUD2Q9BSE4 AL603914.1-201ENST00000401964 204 ntBASIC1.24□□□□□ -2.21
HERPUD2Q9BSE4 RNU7-181P-201ENST00000517234 74 ntBASIC1.24□□□□□ -2.21
HERPUD2Q9BSE4 MIR4662B-201ENST00000579498 81 ntBASIC1.24□□□□□ -2.21
HERPUD2Q9BSE4 AC131055.1-201ENST00000584626 316 ntBASIC1.24□□□□□ -2.21
HERPUD2Q9BSE4 AL365205.2-201ENST00000594586 68 ntBASIC1.24□□□□□ -2.21
HERPUD2Q9BSE4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.24□□□□□ -2.21
HERPUD2Q9BSE4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.24□□□□□ -2.21
HERPUD2Q9BSE4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
HERPUD2Q9BSE4 RNU6-147P-201ENST00000383983 107 ntBASIC1.23□□□□□ -2.21
HERPUD2Q9BSE4 MT-TI-201ENST00000387365 69 ntBASIC1.23□□□□□ -2.21
HERPUD2Q9BSE4 SNORD77.3-201ENST00000391113 65 ntBASIC1.23□□□□□ -2.21
HERPUD2Q9BSE4 RNU6-1064P-201ENST00000410626 104 ntBASIC1.23□□□□□ -2.21
HERPUD2Q9BSE4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.23□□□□□ -2.21
HERPUD2Q9BSE4 SNORD124-201ENST00000459577 104 ntBASIC1.23□□□□□ -2.21
HERPUD2Q9BSE4 RNU6-1299P-201ENST00000516316 100 ntBASIC1.23□□□□□ -2.21
HERPUD2Q9BSE4 MIR3613-201ENST00000579844 87 ntBASIC1.23□□□□□ -2.21
HERPUD2Q9BSE4 SEPT14P17-201ENST00000617978 177 ntBASIC1.23□□□□□ -2.21
HERPUD2Q9BSE4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
HERPUD2Q9BSE4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
HERPUD2Q9BSE4 Y_RNA.35-201ENST00000362601 101 ntBASIC1.22□□□□□ -2.21
HERPUD2Q9BSE4 SNORD58C-201ENST00000365223 64 ntBASIC1.22□□□□□ -2.21
HERPUD2Q9BSE4 MIR518F-201ENST00000384973 87 ntBASIC1.22□□□□□ -2.21
HERPUD2Q9BSE4 MIR624-201ENST00000385217 97 ntBASIC1.22□□□□□ -2.21
HERPUD2Q9BSE4 MIR942-201ENST00000401111 86 ntBASIC1.22□□□□□ -2.21
HERPUD2Q9BSE4 RNU6-938P-201ENST00000411285 103 ntBASIC1.22□□□□□ -2.21
HERPUD2Q9BSE4 AF228730.3-201ENST00000436691 102 ntBASIC1.22□□□□□ -2.21
HERPUD2Q9BSE4 AC107297.1-201ENST00000459991 176 ntBASIC1.22□□□□□ -2.21
HERPUD2Q9BSE4 UBL5P1-201ENST00000507979 193 ntBASIC1.22□□□□□ -2.21
HERPUD2Q9BSE4 Y_RNA.666-201ENST00000516187 112 ntBASIC1.22□□□□□ -2.21
HERPUD2Q9BSE4 RNU6-126P-201ENST00000516685 103 ntBASIC1.22□□□□□ -2.21
HERPUD2Q9BSE4 RNU11-2P-201ENST00000516898 142 ntBASIC1.22□□□□□ -2.21
HERPUD2Q9BSE4 AP003716.2-201ENST00000528260 108 ntBASIC1.22□□□□□ -2.21
HERPUD2Q9BSE4 MIR4661-201ENST00000582720 75 ntBASIC1.22□□□□□ -2.21
HERPUD2Q9BSE4 HSPE1P19-201ENST00000603327 295 ntBASIC1.22□□□□□ -2.21
HERPUD2Q9BSE4 RNU6-1056P-201ENST00000383996 107 ntBASIC1.21□□□□□ -2.22
HERPUD2Q9BSE4 SNORA51.10-201ENST00000384418 136 ntBASIC1.21□□□□□ -2.22
HERPUD2Q9BSE4 Y_RNA.537-201ENST00000384626 109 ntBASIC1.21□□□□□ -2.22
HERPUD2Q9BSE4 MIR570-201ENST00000384917 97 ntBASIC1.21□□□□□ -2.22
HERPUD2Q9BSE4 MIR548O-201ENST00000408583 114 ntBASIC1.21□□□□□ -2.22
HERPUD2Q9BSE4 MIR1185-1-201ENST00000408598 86 ntBASIC1.21□□□□□ -2.22
HERPUD2Q9BSE4 MIR3129-201ENST00000581095 76 ntBASIC1.21□□□□□ -2.22
HERPUD2Q9BSE4 RNU6-888P-201ENST00000363010 101 ntBASIC1.2□□□□□ -2.22
HERPUD2Q9BSE4 RN7SKP19-201ENST00000516016 252 ntBASIC1.2□□□□□ -2.22
HERPUD2Q9BSE4 RNU7-25P-201ENST00000516544 62 ntBASIC1.2□□□□□ -2.22
HERPUD2Q9BSE4 Y_RNA.690-201ENST00000516603 95 ntBASIC1.2□□□□□ -2.22
HERPUD2Q9BSE4 RNU6-365P-201ENST00000517113 106 ntBASIC1.2□□□□□ -2.22
HERPUD2Q9BSE4 MIR4679-1-201ENST00000637619 75 ntBASIC1.2□□□□□ -2.22
HERPUD2Q9BSE4 RNU6-1292P-201ENST00000383856 107 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 605 ms