Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 SNORD115-15-201ENST00000364809 81 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 SNORD115-1-201ENST00000364961 82 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 SNORD115-26-201ENST00000365067 82 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 SNORD115-10-201ENST00000365073 81 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 SNORD115-43-201ENST00000365503 82 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 SNORD115-36-201ENST00000365629 82 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 RNU6-449P-201ENST00000383914 107 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 SNORA24-201ENST00000384096 131 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 Y_RNA.464-201ENST00000384282 110 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 SNORA51.10-201ENST00000384418 136 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 RNU6-125P-201ENST00000384505 107 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 Y_RNA.525-201ENST00000384570 113 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 Y_RNA.542-201ENST00000384641 111 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 MIR624-201ENST00000385217 97 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 MIR569-201ENST00000385228 96 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 RNA5SP127-201ENST00000411051 133 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 AC244023.1-201ENST00000426884 112 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.78□□□□□ -2.28
EBF4Q9BQW3 RNU7-67P-201ENST00000459003 62 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 RNU2-11P-201ENST00000459191 187 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 Y_RNA.651-201ENST00000459380 103 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 RNU7-43P-201ENST00000516554 64 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 RNU6-1212P-201ENST00000517023 104 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 AC112693.2-201ENST00000556538 232 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 AC242498.1-201ENST00000604134 111 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 SNORD115-40-201ENST00000606510 82 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 AL020996.3-201ENST00000606617 222 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 MIR8055-201ENST00000610739 97 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.78□□□□□ -2.28
EBF4Q9BQW3 RNA5SP264-201ENST00000363115 107 ntBASIC0.77□□□□□ -2.29
EBF4Q9BQW3 Y_RNA.215-201ENST00000364204 112 ntBASIC0.77□□□□□ -2.29
EBF4Q9BQW3 Y_RNA.410-201ENST00000383992 113 ntBASIC0.77□□□□□ -2.29
EBF4Q9BQW3 Y_RNA.537-201ENST00000384626 109 ntBASIC0.77□□□□□ -2.29
EBF4Q9BQW3 SNORD37.2-201ENST00000391075 66 ntBASIC0.77□□□□□ -2.29
EBF4Q9BQW3 SNORA26.6-201ENST00000391256 115 ntBASIC0.77□□□□□ -2.29
EBF4Q9BQW3 SNORA75.5-201ENST00000391291 81 ntBASIC0.77□□□□□ -2.29
EBF4Q9BQW3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.77□□□□□ -2.29
EBF4Q9BQW3 RNU6-321P-201ENST00000410912 106 ntBASIC0.77□□□□□ -2.29
EBF4Q9BQW3 AL392103.1-201ENST00000447000 198 ntBASIC0.77□□□□□ -2.29
EBF4Q9BQW3 RPS29P24-201ENST00000486345 171 ntBASIC0.77□□□□□ -2.29
EBF4Q9BQW3 RNU6-998P-201ENST00000515894 101 ntBASIC0.77□□□□□ -2.29
EBF4Q9BQW3 RNU6-426P-201ENST00000516464 97 ntBASIC0.77□□□□□ -2.29
EBF4Q9BQW3 RNU6-126P-201ENST00000516685 103 ntBASIC0.77□□□□□ -2.29
EBF4Q9BQW3 RNU6-1258P-201ENST00000516911 111 ntBASIC0.77□□□□□ -2.29
EBF4Q9BQW3 MIR3133-201ENST00000583157 78 ntBASIC0.77□□□□□ -2.29
EBF4Q9BQW3 uc_338.6-201ENST00000613544 171 ntBASIC0.77□□□□□ -2.29
EBF4Q9BQW3 AC091932.4-201ENST00000623386 200 ntBASIC0.77□□□□□ -2.29
EBF4Q9BQW3 MIR6516-201ENST00000630554 81 ntBASIC0.77□□□□□ -2.29
EBF4Q9BQW3 AL596211.1-201ENST00000569873 2277 ntBASIC0.77□□□□□ -2.29
EBF4Q9BQW3 Y_RNA.242-201ENST00000364473 110 ntBASIC0.76□□□□□ -2.29
EBF4Q9BQW3 RNU4-16P-201ENST00000364737 141 ntBASIC0.76□□□□□ -2.29
EBF4Q9BQW3 AL035398.1-201ENST00000430869 322 ntBASIC0.76□□□□□ -2.29
EBF4Q9BQW3 snoU13.21-201ENST00000459368 105 ntBASIC0.76□□□□□ -2.29
EBF4Q9BQW3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.76□□□□□ -2.29
EBF4Q9BQW3 AC108081.1-201ENST00000604358 221 ntBASIC0.76□□□□□ -2.29
EBF4Q9BQW3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.75□□□□□ -2.29
EBF4Q9BQW3 MIR103A2-201ENST00000362154 78 ntBASIC0.75□□□□□ -2.29
EBF4Q9BQW3 MIR337-201ENST00000362281 93 ntBASIC0.75□□□□□ -2.29
EBF4Q9BQW3 RNU6-1062P-201ENST00000383908 107 ntBASIC0.75□□□□□ -2.29
EBF4Q9BQW3 Y_RNA.400-201ENST00000383963 111 ntBASIC0.75□□□□□ -2.29
EBF4Q9BQW3 AC015818.7-201ENST00000428754 109 ntBASIC0.75□□□□□ -2.29
EBF4Q9BQW3 SUMO1P3-201ENST00000439961 304 ntBASIC0.75□□□□□ -2.29
EBF4Q9BQW3 AC087499.7-201ENST00000441958 109 ntBASIC0.75□□□□□ -2.29
EBF4Q9BQW3 Y_RNA.676-201ENST00000516393 96 ntBASIC0.75□□□□□ -2.29
EBF4Q9BQW3 MIR3646-201ENST00000578301 84 ntBASIC0.75□□□□□ -2.29
EBF4Q9BQW3 MIR3973-201ENST00000579824 107 ntBASIC0.75□□□□□ -2.29
EBF4Q9BQW3 AC131055.1-201ENST00000584626 316 ntBASIC0.75□□□□□ -2.29
EBF4Q9BQW3 RNU6-349P-201ENST00000362402 107 ntBASIC0.74□□□□□ -2.29
EBF4Q9BQW3 SNORA1.2-201ENST00000365189 134 ntBASIC0.74□□□□□ -2.29
EBF4Q9BQW3 Y_RNA.330-201ENST00000365230 109 ntBASIC0.74□□□□□ -2.29
EBF4Q9BQW3 Y_RNA.420-201ENST00000384043 110 ntBASIC0.74□□□□□ -2.29
EBF4Q9BQW3 SNORD12C-201ENST00000386307 89 ntBASIC0.74□□□□□ -2.29
EBF4Q9BQW3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.74□□□□□ -2.29
EBF4Q9BQW3 RNU6-205P-201ENST00000390858 107 ntBASIC0.74□□□□□ -2.29
EBF4Q9BQW3 Y_RNA.584-201ENST00000391090 114 ntBASIC0.74□□□□□ -2.29
EBF4Q9BQW3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.74□□□□□ -2.29
EBF4Q9BQW3 IGKV1-22-201ENST00000524313 326 ntBASIC0.74□□□□□ -2.29
EBF4Q9BQW3 AC023827.1-201ENST00000569247 97 ntBASIC0.74□□□□□ -2.29
EBF4Q9BQW3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
EBF4Q9BQW3 Y_RNA.171-201ENST00000363760 102 ntBASIC0.73□□□□□ -2.29
EBF4Q9BQW3 SNORA1.1-201ENST00000364671 133 ntBASIC0.73□□□□□ -2.29
EBF4Q9BQW3 RNU6-915P-201ENST00000364943 103 ntBASIC0.73□□□□□ -2.29
EBF4Q9BQW3 RNU6-602P-201ENST00000411155 105 ntBASIC0.73□□□□□ -2.29
EBF4Q9BQW3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.73□□□□□ -2.29
EBF4Q9BQW3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.73□□□□□ -2.29
EBF4Q9BQW3 RNU7-73P-201ENST00000458743 63 ntBASIC0.73□□□□□ -2.29
EBF4Q9BQW3 RNU7-90P-201ENST00000459216 62 ntBASIC0.73□□□□□ -2.29
EBF4Q9BQW3 RNU7-96P-201ENST00000459535 64 ntBASIC0.73□□□□□ -2.29
EBF4Q9BQW3 AC107297.1-201ENST00000459991 176 ntBASIC0.73□□□□□ -2.29
EBF4Q9BQW3 RNU5E-3P-201ENST00000515913 68 ntBASIC0.73□□□□□ -2.29
EBF4Q9BQW3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.73□□□□□ -2.29
EBF4Q9BQW3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.73□□□□□ -2.29
EBF4Q9BQW3 MIR548X2-201ENST00000579776 100 ntBASIC0.73□□□□□ -2.29
EBF4Q9BQW3 MIR6717-201ENST00000622747 73 ntBASIC0.73□□□□□ -2.29
EBF4Q9BQW3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
EBF4Q9BQW3 SNORD114-27-201ENST00000363766 70 ntBASIC0.72□□□□□ -2.29
EBF4Q9BQW3 RNU6-257P-201ENST00000410238 98 ntBASIC0.72□□□□□ -2.29
EBF4Q9BQW3 POLR2J4-204ENST00000418424 324 ntBASIC0.72□□□□□ -2.29
EBF4Q9BQW3 MTND4LP9-201ENST00000427694 174 ntBASIC0.72□□□□□ -2.29
EBF4Q9BQW3 PDCD5P2-201ENST00000507570 312 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms