Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 MIR4282-201ENST00000583613 67 ntBASIC0.31□□□□□ -2.36
KLHDC3Q9BQ90 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.31□□□□□ -2.36
KLHDC3Q9BQ90 AC092634.7-201ENST00000621022 103 ntBASIC0.31□□□□□ -2.36
KLHDC3Q9BQ90 U6.104-201ENST00000637979 90 ntBASIC0.31□□□□□ -2.36
KLHDC3Q9BQ90 MIRLET7D-201ENST00000362263 87 ntBASIC0.3□□□□□ -2.36
KLHDC3Q9BQ90 MIR30D-201ENST00000362283 70 ntBASIC0.3□□□□□ -2.36
KLHDC3Q9BQ90 VTRNA1-3-201ENST00000365645 89 ntBASIC0.3□□□□□ -2.36
KLHDC3Q9BQ90 RNU6-1227P-201ENST00000383981 107 ntBASIC0.3□□□□□ -2.36
KLHDC3Q9BQ90 SNORA1-201ENST00000384107 130 ntBASIC0.3□□□□□ -2.36
KLHDC3Q9BQ90 SNORD12C-201ENST00000386307 89 ntBASIC0.3□□□□□ -2.36
KLHDC3Q9BQ90 SNORA26.6-201ENST00000391256 115 ntBASIC0.3□□□□□ -2.36
KLHDC3Q9BQ90 RNU6-453P-201ENST00000516819 85 ntBASIC0.3□□□□□ -2.36
KLHDC3Q9BQ90 RNU7-156P-201ENST00000517214 74 ntBASIC0.3□□□□□ -2.36
KLHDC3Q9BQ90 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.3□□□□□ -2.36
KLHDC3Q9BQ90 MIR5197-201ENST00000583721 112 ntBASIC0.3□□□□□ -2.36
KLHDC3Q9BQ90 AC008608.1-201ENST00000603910 127 ntBASIC0.3□□□□□ -2.36
KLHDC3Q9BQ90 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.3□□□□□ -2.36
KLHDC3Q9BQ90 MIR6717-201ENST00000622747 73 ntBASIC0.3□□□□□ -2.36
KLHDC3Q9BQ90 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
KLHDC3Q9BQ90 MIR342-201ENST00000362212 99 ntBASIC0.29□□□□□ -2.36
KLHDC3Q9BQ90 Y_RNA.23-201ENST00000362496 106 ntBASIC0.29□□□□□ -2.36
KLHDC3Q9BQ90 RNU6-653P-201ENST00000363074 106 ntBASIC0.29□□□□□ -2.36
KLHDC3Q9BQ90 RNU4-17P-201ENST00000365598 141 ntBASIC0.29□□□□□ -2.36
KLHDC3Q9BQ90 Y_RNA.454-201ENST00000384224 113 ntBASIC0.29□□□□□ -2.36
KLHDC3Q9BQ90 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
KLHDC3Q9BQ90 RNU6-381P-201ENST00000391259 108 ntBASIC0.29□□□□□ -2.36
KLHDC3Q9BQ90 SNORA79-201ENST00000408376 140 ntBASIC0.29□□□□□ -2.36
KLHDC3Q9BQ90 RNU6-651P-201ENST00000411040 105 ntBASIC0.29□□□□□ -2.36
KLHDC3Q9BQ90 RNU7-80P-201ENST00000459562 61 ntBASIC0.29□□□□□ -2.36
KLHDC3Q9BQ90 AC002350.1-201ENST00000490759 375 ntBASIC0.29□□□□□ -2.36
KLHDC3Q9BQ90 Y_RNA.679-201ENST00000516416 91 ntBASIC0.29□□□□□ -2.36
KLHDC3Q9BQ90 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
KLHDC3Q9BQ90 SNORD114-23-201ENST00000363536 72 ntBASIC0.28□□□□□ -2.36
KLHDC3Q9BQ90 RNU6-728P-201ENST00000365375 104 ntBASIC0.28□□□□□ -2.36
KLHDC3Q9BQ90 Y_RNA.351-201ENST00000365436 96 ntBASIC0.28□□□□□ -2.36
KLHDC3Q9BQ90 Y_RNA.422-201ENST00000384054 114 ntBASIC0.28□□□□□ -2.36
KLHDC3Q9BQ90 Y_RNA.518-201ENST00000384552 113 ntBASIC0.28□□□□□ -2.36
KLHDC3Q9BQ90 MIR216A-201ENST00000385063 110 ntBASIC0.28□□□□□ -2.36
KLHDC3Q9BQ90 AL365265.1-201ENST00000621045 234 ntBASIC0.28□□□□□ -2.36
KLHDC3Q9BQ90 uc_338.16-201ENST00000621804 95 ntBASIC0.28□□□□□ -2.36
KLHDC3Q9BQ90 RNU6-1292P-201ENST00000383856 107 ntBASIC0.27□□□□□ -2.37
KLHDC3Q9BQ90 Y_RNA.430-201ENST00000384081 110 ntBASIC0.27□□□□□ -2.37
KLHDC3Q9BQ90 SNORD71-201ENST00000411292 86 ntBASIC0.27□□□□□ -2.37
KLHDC3Q9BQ90 SNORA62.5-201ENST00000516634 120 ntBASIC0.27□□□□□ -2.37
KLHDC3Q9BQ90 RNU6-635P-201ENST00000516651 102 ntBASIC0.27□□□□□ -2.37
KLHDC3Q9BQ90 RNU6-448P-201ENST00000517052 107 ntBASIC0.27□□□□□ -2.37
KLHDC3Q9BQ90 RN7SL793P-201ENST00000583259 296 ntBASIC0.27□□□□□ -2.37
KLHDC3Q9BQ90 AL365205.2-201ENST00000594586 68 ntBASIC0.27□□□□□ -2.37
KLHDC3Q9BQ90 MIR8062-201ENST00000621515 85 ntBASIC0.27□□□□□ -2.37
KLHDC3Q9BQ90 AC091932.4-201ENST00000623386 200 ntBASIC0.27□□□□□ -2.37
KLHDC3Q9BQ90 MIR376A2-201ENST00000636782 80 ntBASIC0.27□□□□□ -2.37
KLHDC3Q9BQ90 Y_RNA.11-201ENST00000362375 109 ntBASIC0.26□□□□□ -2.37
KLHDC3Q9BQ90 Y_RNA.36-201ENST00000362602 112 ntBASIC0.26□□□□□ -2.37
KLHDC3Q9BQ90 RNU6-103P-201ENST00000363686 107 ntBASIC0.26□□□□□ -2.37
KLHDC3Q9BQ90 Y_RNA.176-201ENST00000363815 109 ntBASIC0.26□□□□□ -2.37
KLHDC3Q9BQ90 Y_RNA.393-201ENST00000383936 102 ntBASIC0.26□□□□□ -2.37
KLHDC3Q9BQ90 Y_RNA.461-201ENST00000384263 103 ntBASIC0.26□□□□□ -2.37
KLHDC3Q9BQ90 MIR518A1-201ENST00000385068 85 ntBASIC0.26□□□□□ -2.37
KLHDC3Q9BQ90 RNU6-679P-201ENST00000391003 106 ntBASIC0.26□□□□□ -2.37
KLHDC3Q9BQ90 MIR1302-6-201ENST00000408466 90 ntBASIC0.26□□□□□ -2.37
KLHDC3Q9BQ90 RNA5SP237-201ENST00000410414 113 ntBASIC0.26□□□□□ -2.37
KLHDC3Q9BQ90 RNU4-43P-201ENST00000410628 137 ntBASIC0.26□□□□□ -2.37
KLHDC3Q9BQ90 Y_RNA.618-201ENST00000410949 107 ntBASIC0.26□□□□□ -2.37
KLHDC3Q9BQ90 SNORA40.8-201ENST00000411034 126 ntBASIC0.26□□□□□ -2.37
KLHDC3Q9BQ90 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.26□□□□□ -2.37
KLHDC3Q9BQ90 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.26□□□□□ -2.37
KLHDC3Q9BQ90 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
KLHDC3Q9BQ90 RNA5SP94-201ENST00000516917 108 ntBASIC0.26□□□□□ -2.37
KLHDC3Q9BQ90 AL442663.2-201ENST00000554385 511 ntBASIC0.26□□□□□ -2.37
KLHDC3Q9BQ90 MIR3152-201ENST00000579801 74 ntBASIC0.26□□□□□ -2.37
KLHDC3Q9BQ90 MIR3129-201ENST00000581095 76 ntBASIC0.26□□□□□ -2.37
KLHDC3Q9BQ90 AL662814.1-201ENST00000617364 121 ntBASIC0.26□□□□□ -2.37
KLHDC3Q9BQ90 AC010487.4-201ENST00000637027 61 ntBASIC0.26□□□□□ -2.37
KLHDC3Q9BQ90 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
KLHDC3Q9BQ90 Y_RNA.262-201ENST00000364641 102 ntBASIC0.25□□□□□ -2.37
KLHDC3Q9BQ90 RNA5SP517-201ENST00000364724 117 ntBASIC0.25□□□□□ -2.37
KLHDC3Q9BQ90 RNA5SP117-201ENST00000365294 118 ntBASIC0.25□□□□□ -2.37
KLHDC3Q9BQ90 RNU6-1327P-201ENST00000365302 105 ntBASIC0.25□□□□□ -2.37
KLHDC3Q9BQ90 Y_RNA.512-201ENST00000384518 102 ntBASIC0.25□□□□□ -2.37
KLHDC3Q9BQ90 RPL39P25-201ENST00000449384 154 ntBASIC0.25□□□□□ -2.37
KLHDC3Q9BQ90 RNU7-45P-201ENST00000459460 63 ntBASIC0.25□□□□□ -2.37
KLHDC3Q9BQ90 SNORA25.12-201ENST00000516202 82 ntBASIC0.25□□□□□ -2.37
KLHDC3Q9BQ90 AP003327.1-201ENST00000529684 127 ntBASIC0.25□□□□□ -2.37
KLHDC3Q9BQ90 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.25□□□□□ -2.37
KLHDC3Q9BQ90 MIR7111-201ENST00000619751 72 ntBASIC0.25□□□□□ -2.37
KLHDC3Q9BQ90 Y_RNA.42-201ENST00000362660 108 ntBASIC0.24□□□□□ -2.37
KLHDC3Q9BQ90 Y_RNA.352-201ENST00000365439 102 ntBASIC0.24□□□□□ -2.37
KLHDC3Q9BQ90 Y_RNA.416-201ENST00000384014 113 ntBASIC0.24□□□□□ -2.37
KLHDC3Q9BQ90 Y_RNA.483-201ENST00000384380 101 ntBASIC0.24□□□□□ -2.37
KLHDC3Q9BQ90 SNORA20-201ENST00000384662 132 ntBASIC0.24□□□□□ -2.37
KLHDC3Q9BQ90 SNORD93-201ENST00000408813 74 ntBASIC0.24□□□□□ -2.37
KLHDC3Q9BQ90 Y_RNA.720-201ENST00000517166 92 ntBASIC0.24□□□□□ -2.37
KLHDC3Q9BQ90 MT-TW-201ENST00000387382 68 ntBASIC0.23□□□□□ -2.37
KLHDC3Q9BQ90 RNU4-83P-201ENST00000410863 133 ntBASIC0.23□□□□□ -2.37
KLHDC3Q9BQ90 RNU6-561P-201ENST00000516222 102 ntBASIC0.23□□□□□ -2.37
KLHDC3Q9BQ90 AC022523.2-201ENST00000561045 150 ntBASIC0.23□□□□□ -2.37
KLHDC3Q9BQ90 MIR3678-201ENST00000578455 94 ntBASIC0.23□□□□□ -2.37
KLHDC3Q9BQ90 AC006504.6-201ENST00000590142 199 ntBASIC0.23□□□□□ -2.37
KLHDC3Q9BQ90 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.23□□□□□ -2.37
KLHDC3Q9BQ90 AL596211.1-201ENST00000569873 2277 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms