Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 SNORD114-27-201ENST00000363766 70 ntBASIC1.11□□□□□ -2.23
PKP2Q99959 Y_RNA.343-201ENST00000365354 112 ntBASIC1.11□□□□□ -2.23
PKP2Q99959 SNORA27-201ENST00000384323 126 ntBASIC1.11□□□□□ -2.23
PKP2Q99959 Y_RNA.568-201ENST00000384742 113 ntBASIC1.11□□□□□ -2.23
PKP2Q99959 SNORA40.6-201ENST00000391153 128 ntBASIC1.11□□□□□ -2.23
PKP2Q99959 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.11□□□□□ -2.23
PKP2Q99959 AL591704.2-201ENST00000421658 181 ntBASIC1.11□□□□□ -2.23
PKP2Q99959 OR2A41P-201ENST00000473586 105 ntBASIC1.11□□□□□ -2.23
PKP2Q99959 SNORA31.4-201ENST00000516049 129 ntBASIC1.11□□□□□ -2.23
PKP2Q99959 RNA5SP272-201ENST00000516095 111 ntBASIC1.11□□□□□ -2.23
PKP2Q99959 RNU6-1149P-201ENST00000516810 97 ntBASIC1.11□□□□□ -2.23
PKP2Q99959 MIR4764-201ENST00000580680 88 ntBASIC1.11□□□□□ -2.23
PKP2Q99959 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
PKP2Q99959 Y_RNA.120-201ENST00000363304 110 ntBASIC1.1□□□□□ -2.23
PKP2Q99959 SNORD50.2-201ENST00000365465 70 ntBASIC1.1□□□□□ -2.23
PKP2Q99959 Y_RNA.420-201ENST00000384043 110 ntBASIC1.1□□□□□ -2.23
PKP2Q99959 SNORA24-201ENST00000384096 131 ntBASIC1.1□□□□□ -2.23
PKP2Q99959 MIR570-201ENST00000384917 97 ntBASIC1.1□□□□□ -2.23
PKP2Q99959 MIR520C-201ENST00000385005 87 ntBASIC1.1□□□□□ -2.23
PKP2Q99959 RNA5SP236-201ENST00000516169 116 ntBASIC1.1□□□□□ -2.23
PKP2Q99959 Y_RNA.686-201ENST00000516548 134 ntBASIC1.1□□□□□ -2.23
PKP2Q99959 MIR3660-201ENST00000584845 100 ntBASIC1.1□□□□□ -2.23
PKP2Q99959 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.1□□□□□ -2.23
PKP2Q99959 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
PKP2Q99959 RNU1-124P-201ENST00000363861 145 ntBASIC1.09□□□□□ -2.23
PKP2Q99959 Y_RNA.537-201ENST00000384626 109 ntBASIC1.09□□□□□ -2.23
PKP2Q99959 SNORA20-201ENST00000384662 132 ntBASIC1.09□□□□□ -2.23
PKP2Q99959 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.09□□□□□ -2.23
PKP2Q99959 AL392103.1-201ENST00000447000 198 ntBASIC1.09□□□□□ -2.23
PKP2Q99959 AC107297.1-201ENST00000459991 176 ntBASIC1.09□□□□□ -2.23
PKP2Q99959 RPS29P24-201ENST00000486345 171 ntBASIC1.09□□□□□ -2.23
PKP2Q99959 RNU6-998P-201ENST00000515894 101 ntBASIC1.09□□□□□ -2.23
PKP2Q99959 RNU7-41P-201ENST00000515917 61 ntBASIC1.09□□□□□ -2.23
PKP2Q99959 SNORA31.2-201ENST00000516019 134 ntBASIC1.09□□□□□ -2.23
PKP2Q99959 SNORD111.1-201ENST00000516421 86 ntBASIC1.09□□□□□ -2.23
PKP2Q99959 AL357312.1-201ENST00000603879 298 ntBASIC1.09□□□□□ -2.23
PKP2Q99959 MIR4791-201ENST00000607666 84 ntBASIC1.09□□□□□ -2.23
PKP2Q99959 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
PKP2Q99959 MIR6788-201ENST00000618842 66 ntBASIC1.09□□□□□ -2.23
PKP2Q99959 AP001340.1-201ENST00000624405 217 ntBASIC1.09□□□□□ -2.23
PKP2Q99959 AC008133.2-201ENST00000624540 351 ntBASIC1.09□□□□□ -2.23
PKP2Q99959 AC010332.2-201ENST00000613083 1904 ntBASIC1.09□□□□□ -2.24
PKP2Q99959 RNU6-704P-201ENST00000364162 103 ntBASIC1.08□□□□□ -2.24
PKP2Q99959 RNU1-93P-201ENST00000364704 169 ntBASIC1.08□□□□□ -2.24
PKP2Q99959 Y_RNA.351-201ENST00000365436 96 ntBASIC1.08□□□□□ -2.24
PKP2Q99959 RNU6-1067P-201ENST00000384752 107 ntBASIC1.08□□□□□ -2.24
PKP2Q99959 RNU6-257P-201ENST00000410238 98 ntBASIC1.08□□□□□ -2.24
PKP2Q99959 RNU7-96P-201ENST00000459535 64 ntBASIC1.08□□□□□ -2.24
PKP2Q99959 RNU6-947P-201ENST00000516264 106 ntBASIC1.08□□□□□ -2.24
PKP2Q99959 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.08□□□□□ -2.24
PKP2Q99959 MIR3192-201ENST00000584920 77 ntBASIC1.08□□□□□ -2.24
PKP2Q99959 AL096861.1-201ENST00000610899 123 ntBASIC1.08□□□□□ -2.24
PKP2Q99959 AC243994.1-201ENST00000618627 109 ntBASIC1.08□□□□□ -2.24
PKP2Q99959 AC091932.4-201ENST00000623386 200 ntBASIC1.08□□□□□ -2.24
PKP2Q99959 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
PKP2Q99959 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.07□□□□□ -2.24
PKP2Q99959 RNU6-508P-201ENST00000363231 103 ntBASIC1.07□□□□□ -2.24
PKP2Q99959 RNU6-915P-201ENST00000364943 103 ntBASIC1.07□□□□□ -2.24
PKP2Q99959 SNORA51.10-201ENST00000384418 136 ntBASIC1.07□□□□□ -2.24
PKP2Q99959 RNU6-910P-201ENST00000390844 107 ntBASIC1.07□□□□□ -2.24
PKP2Q99959 AL603914.1-201ENST00000401964 204 ntBASIC1.07□□□□□ -2.24
PKP2Q99959 MIR548J-201ENST00000408833 112 ntBASIC1.07□□□□□ -2.24
PKP2Q99959 RNU6-1054P-201ENST00000411293 104 ntBASIC1.07□□□□□ -2.24
PKP2Q99959 MTND4LP9-201ENST00000427694 174 ntBASIC1.07□□□□□ -2.24
PKP2Q99959 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.07□□□□□ -2.24
PKP2Q99959 snoU13.25-201ENST00000458945 104 ntBASIC1.07□□□□□ -2.24
PKP2Q99959 RNU7-80P-201ENST00000459562 61 ntBASIC1.07□□□□□ -2.24
PKP2Q99959 AC048334.1-201ENST00000477975 159 ntBASIC1.07□□□□□ -2.24
PKP2Q99959 RPS23P4-201ENST00000487908 423 ntBASIC1.07□□□□□ -2.24
PKP2Q99959 AP001328.1-201ENST00000528550 176 ntBASIC1.07□□□□□ -2.24
PKP2Q99959 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.06□□□□□ -2.24
PKP2Q99959 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
PKP2Q99959 MIR342-201ENST00000362212 99 ntBASIC1.06□□□□□ -2.24
PKP2Q99959 RNU6-309P-201ENST00000364573 106 ntBASIC1.06□□□□□ -2.24
PKP2Q99959 SNORD18B-201ENST00000365659 72 ntBASIC1.06□□□□□ -2.24
PKP2Q99959 Y_RNA.454-201ENST00000384224 113 ntBASIC1.06□□□□□ -2.24
PKP2Q99959 SNORA40-201ENST00000388090 126 ntBASIC1.06□□□□□ -2.24
PKP2Q99959 Y_RNA.586-201ENST00000391146 98 ntBASIC1.06□□□□□ -2.24
PKP2Q99959 AL035398.1-201ENST00000430869 322 ntBASIC1.06□□□□□ -2.24
PKP2Q99959 MTATP6P21-201ENST00000440681 189 ntBASIC1.06□□□□□ -2.24
PKP2Q99959 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
PKP2Q99959 RPL39P39-201ENST00000455840 151 ntBASIC1.06□□□□□ -2.24
PKP2Q99959 RNU7-73P-201ENST00000458743 63 ntBASIC1.06□□□□□ -2.24
PKP2Q99959 RNU7-67P-201ENST00000459003 62 ntBASIC1.06□□□□□ -2.24
PKP2Q99959 Y_RNA.690-201ENST00000516603 95 ntBASIC1.06□□□□□ -2.24
PKP2Q99959 RNU6-958P-201ENST00000516995 106 ntBASIC1.06□□□□□ -2.24
PKP2Q99959 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.06□□□□□ -2.24
PKP2Q99959 HSPE1P19-201ENST00000603327 295 ntBASIC1.06□□□□□ -2.24
PKP2Q99959 MIR4251-201ENST00000635819 61 ntBASIC1.06□□□□□ -2.24
PKP2Q99959 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
PKP2Q99959 AL596211.1-201ENST00000569873 2277 ntBASIC1.05□□□□□ -2.24
PKP2Q99959 RNU1-133P-201ENST00000364867 167 ntBASIC1.05□□□□□ -2.24
PKP2Q99959 RNU2-11P-201ENST00000459191 187 ntBASIC1.05□□□□□ -2.24
PKP2Q99959 Y_RNA.651-201ENST00000459380 103 ntBASIC1.05□□□□□ -2.24
PKP2Q99959 RNU7-53P-201ENST00000516705 60 ntBASIC1.05□□□□□ -2.24
PKP2Q99959 RNU7-70P-201ENST00000516941 66 ntBASIC1.05□□□□□ -2.24
PKP2Q99959 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
PKP2Q99959 Y_RNA.30-201ENST00000362572 97 ntBASIC1.04□□□□□ -2.24
PKP2Q99959 RNA5SP48-201ENST00000363969 126 ntBASIC1.04□□□□□ -2.24
PKP2Q99959 RNU6-913P-201ENST00000390913 95 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms