Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.67□□□□□ -2.14
TIMP4Q99727 SNORA74.3-201ENST00000517108 154 ntBASIC1.67□□□□□ -2.14
TIMP4Q99727 AL353997.5-201ENST00000618886 171 ntBASIC1.67□□□□□ -2.14
TIMP4Q99727 RNU6-1123P-201ENST00000362347 106 ntBASIC1.66□□□□□ -2.14
TIMP4Q99727 U8.6-201ENST00000364939 135 ntBASIC1.66□□□□□ -2.14
TIMP4Q99727 SNORA51.10-201ENST00000384418 136 ntBASIC1.66□□□□□ -2.14
TIMP4Q99727 RNA5SP212-201ENST00000391223 107 ntBASIC1.66□□□□□ -2.14
TIMP4Q99727 AC244636.1-201ENST00000421152 228 ntBASIC1.66□□□□□ -2.14
TIMP4Q99727 HMGN1P33-201ENST00000432945 451 ntBASIC1.66□□□□□ -2.14
TIMP4Q99727 RNU6-1258P-201ENST00000516911 111 ntBASIC1.66□□□□□ -2.14
TIMP4Q99727 RNA5SP170-201ENST00000517150 101 ntBASIC1.66□□□□□ -2.14
TIMP4Q99727 RNU6-537P-201ENST00000517277 103 ntBASIC1.66□□□□□ -2.14
TIMP4Q99727 AC068339.1-201ENST00000526965 141 ntBASIC1.66□□□□□ -2.14
TIMP4Q99727 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.66□□□□□ -2.14
TIMP4Q99727 SNORA22.1-201ENST00000362701 134 ntBASIC1.65□□□□□ -2.15
TIMP4Q99727 MIR520C-201ENST00000385005 87 ntBASIC1.65□□□□□ -2.15
TIMP4Q99727 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
TIMP4Q99727 RPS23P4-201ENST00000487908 423 ntBASIC1.65□□□□□ -2.15
TIMP4Q99727 RNA5SP33-201ENST00000516687 98 ntBASIC1.65□□□□□ -2.15
TIMP4Q99727 DNAJC19P9-201ENST00000555084 351 ntBASIC1.65□□□□□ -2.15
TIMP4Q99727 MIR5009-201ENST00000578736 100 ntBASIC1.65□□□□□ -2.15
TIMP4Q99727 MIR4764-201ENST00000580680 88 ntBASIC1.65□□□□□ -2.15
TIMP4Q99727 AL020996.3-201ENST00000606617 222 ntBASIC1.65□□□□□ -2.15
TIMP4Q99727 MIR6717-201ENST00000622747 73 ntBASIC1.65□□□□□ -2.15
TIMP4Q99727 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.65□□□□□ -2.15
TIMP4Q99727 Y_RNA.323-201ENST00000365157 109 ntBASIC1.64□□□□□ -2.15
TIMP4Q99727 SNORA24-201ENST00000384096 131 ntBASIC1.64□□□□□ -2.15
TIMP4Q99727 Y_RNA.537-201ENST00000384626 109 ntBASIC1.64□□□□□ -2.15
TIMP4Q99727 MIR194-1-201ENST00000384892 85 ntBASIC1.64□□□□□ -2.15
TIMP4Q99727 MIR9-3-201ENST00000385084 90 ntBASIC1.64□□□□□ -2.15
TIMP4Q99727 SNORA26.6-201ENST00000391256 115 ntBASIC1.64□□□□□ -2.15
TIMP4Q99727 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.64□□□□□ -2.15
TIMP4Q99727 RPL39P25-201ENST00000449384 154 ntBASIC1.64□□□□□ -2.15
TIMP4Q99727 AC012493.3-201ENST00000604494 112 ntBASIC1.64□□□□□ -2.15
TIMP4Q99727 AC087741.2-201ENST00000619415 172 ntBASIC1.64□□□□□ -2.15
TIMP4Q99727 SNORA16.1-201ENST00000364597 132 ntBASIC1.63□□□□□ -2.15
TIMP4Q99727 Y_RNA.309-201ENST00000365046 111 ntBASIC1.63□□□□□ -2.15
TIMP4Q99727 Y_RNA.470-201ENST00000384307 117 ntBASIC1.63□□□□□ -2.15
TIMP4Q99727 MIR513A1-201ENST00000385138 129 ntBASIC1.63□□□□□ -2.15
TIMP4Q99727 RNU6-816P-201ENST00000390914 107 ntBASIC1.63□□□□□ -2.15
TIMP4Q99727 RNU6-1268P-201ENST00000391214 107 ntBASIC1.63□□□□□ -2.15
TIMP4Q99727 RNU6-1239P-201ENST00000391310 107 ntBASIC1.63□□□□□ -2.15
TIMP4Q99727 RNA5SP261-201ENST00000410536 106 ntBASIC1.63□□□□□ -2.15
TIMP4Q99727 RNU7-73P-201ENST00000458743 63 ntBASIC1.63□□□□□ -2.15
TIMP4Q99727 RNU6-893P-201ENST00000458841 100 ntBASIC1.63□□□□□ -2.15
TIMP4Q99727 RPS29P11-201ENST00000496507 171 ntBASIC1.63□□□□□ -2.15
TIMP4Q99727 Y_RNA.677-201ENST00000516401 85 ntBASIC1.63□□□□□ -2.15
TIMP4Q99727 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.63□□□□□ -2.15
TIMP4Q99727 MIR4419B-201ENST00000577260 68 ntBASIC1.63□□□□□ -2.15
TIMP4Q99727 Y_RNA.773-201ENST00000607168 90 ntBASIC1.63□□□□□ -2.15
TIMP4Q99727 AC084768.2-201ENST00000622736 221 ntBASIC1.63□□□□□ -2.15
TIMP4Q99727 AC008133.2-201ENST00000624540 351 ntBASIC1.63□□□□□ -2.15
TIMP4Q99727 RNU6-766P-201ENST00000362478 107 ntBASIC1.62□□□□□ -2.15
TIMP4Q99727 RNU1-17P-201ENST00000363022 152 ntBASIC1.62□□□□□ -2.15
TIMP4Q99727 Y_RNA.328-201ENST00000365208 113 ntBASIC1.62□□□□□ -2.15
TIMP4Q99727 SNORA32-201ENST00000384072 121 ntBASIC1.62□□□□□ -2.15
TIMP4Q99727 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
TIMP4Q99727 RNY4P30-201ENST00000410216 95 ntBASIC1.62□□□□□ -2.15
TIMP4Q99727 SNORA19.1-201ENST00000410656 129 ntBASIC1.62□□□□□ -2.15
TIMP4Q99727 JTBP1-201ENST00000441314 247 ntBASIC1.62□□□□□ -2.15
TIMP4Q99727 RNU7-43P-201ENST00000516554 64 ntBASIC1.62□□□□□ -2.15
TIMP4Q99727 AC141557.1-201ENST00000540982 400 ntBASIC1.62□□□□□ -2.15
TIMP4Q99727 AC022254.1-201ENST00000567857 235 ntBASIC1.62□□□□□ -2.15
TIMP4Q99727 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.62□□□□□ -2.15
TIMP4Q99727 RNU6-94P-201ENST00000607728 107 ntBASIC1.62□□□□□ -2.15
TIMP4Q99727 MIR1255B1-201ENST00000636325 63 ntBASIC1.62□□□□□ -2.15
TIMP4Q99727 AL162726.3-218ENST00000636401 95 ntBASIC1.62□□□□□ -2.15
TIMP4Q99727 RNU6-1255P-201ENST00000363434 112 ntBASIC1.61□□□□□ -2.15
TIMP4Q99727 SNORA1.1-201ENST00000364671 133 ntBASIC1.61□□□□□ -2.15
TIMP4Q99727 RNU4-69P-201ENST00000410677 143 ntBASIC1.61□□□□□ -2.15
TIMP4Q99727 RPS3AP1-201ENST00000413190 320 ntBASIC1.61□□□□□ -2.15
TIMP4Q99727 snoU13.16-201ENST00000459350 104 ntBASIC1.61□□□□□ -2.15
TIMP4Q99727 AC113410.1-201ENST00000505029 247 ntBASIC1.61□□□□□ -2.15
TIMP4Q99727 RNU6-322P-201ENST00000516010 103 ntBASIC1.61□□□□□ -2.15
TIMP4Q99727 SNORA25.15-201ENST00000516487 89 ntBASIC1.61□□□□□ -2.15
TIMP4Q99727 RNU6-922P-201ENST00000516753 99 ntBASIC1.61□□□□□ -2.15
TIMP4Q99727 MIR548AE2-201ENST00000583456 67 ntBASIC1.61□□□□□ -2.15
TIMP4Q99727 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
TIMP4Q99727 Y_RNA.299-201ENST00000364973 94 ntBASIC1.6□□□□□ -2.15
TIMP4Q99727 RNU6-1113P-201ENST00000384348 107 ntBASIC1.6□□□□□ -2.15
TIMP4Q99727 MIR590-201ENST00000385008 97 ntBASIC1.6□□□□□ -2.15
TIMP4Q99727 AL451046.2-201ENST00000403074 277 ntBASIC1.6□□□□□ -2.15
TIMP4Q99727 RNU7-41P-201ENST00000515917 61 ntBASIC1.6□□□□□ -2.15
TIMP4Q99727 RNU6-109P-201ENST00000516364 107 ntBASIC1.6□□□□□ -2.15
TIMP4Q99727 RNU6-184P-201ENST00000516514 107 ntBASIC1.6□□□□□ -2.15
TIMP4Q99727 RNU6-250P-201ENST00000516958 103 ntBASIC1.6□□□□□ -2.15
TIMP4Q99727 MIR8081-201ENST00000611533 95 ntBASIC1.6□□□□□ -2.15
TIMP4Q99727 MIR6841-201ENST00000637129 72 ntBASIC1.6□□□□□ -2.15
TIMP4Q99727 Y_RNA.43-201ENST00000362670 111 ntBASIC1.59□□□□□ -2.15
TIMP4Q99727 Y_RNA.155-201ENST00000363632 101 ntBASIC1.59□□□□□ -2.15
TIMP4Q99727 MIR653-201ENST00000385279 96 ntBASIC1.59□□□□□ -2.15
TIMP4Q99727 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
TIMP4Q99727 RPL31P63-201ENST00000422565 375 ntBASIC1.59□□□□□ -2.15
TIMP4Q99727 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.59□□□□□ -2.15
TIMP4Q99727 AC024614.2-201ENST00000577584 372 ntBASIC1.59□□□□□ -2.15
TIMP4Q99727 MIR548AO-201ENST00000579992 96 ntBASIC1.59□□□□□ -2.15
TIMP4Q99727 MIR3618-201ENST00000580330 88 ntBASIC1.59□□□□□ -2.15
TIMP4Q99727 MIR8055-201ENST00000610739 97 ntBASIC1.59□□□□□ -2.15
TIMP4Q99727 MIR4251-201ENST00000635819 61 ntBASIC1.59□□□□□ -2.15
TIMP4Q99727 RNU6-661P-201ENST00000362409 107 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 203.3 ms