Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 MIR2115-201ENST00000516657 100 ntBASIC0.48□□□□□ -2.33
SCN2AQ99250 RNU6-94P-201ENST00000607728 107 ntBASIC0.48□□□□□ -2.33
SCN2AQ99250 Y_RNA.262-201ENST00000364641 102 ntBASIC0.47□□□□□ -2.33
SCN2AQ99250 Y_RNA.304-201ENST00000365011 112 ntBASIC0.47□□□□□ -2.33
SCN2AQ99250 RNU4-45P-201ENST00000365469 141 ntBASIC0.47□□□□□ -2.33
SCN2AQ99250 RNU6-211P-201ENST00000384047 107 ntBASIC0.47□□□□□ -2.33
SCN2AQ99250 RNU6-110P-201ENST00000384508 104 ntBASIC0.47□□□□□ -2.33
SCN2AQ99250 RNU6-493P-201ENST00000391321 108 ntBASIC0.47□□□□□ -2.33
SCN2AQ99250 RNU2-70P-201ENST00000410718 179 ntBASIC0.47□□□□□ -2.33
SCN2AQ99250 AC114737.2-201ENST00000421583 173 ntBASIC0.47□□□□□ -2.33
SCN2AQ99250 MIR4744-201ENST00000581563 82 ntBASIC0.47□□□□□ -2.33
SCN2AQ99250 AC131055.1-201ENST00000584626 316 ntBASIC0.47□□□□□ -2.33
SCN2AQ99250 AC104465.1-201ENST00000611365 139 ntBASIC0.47□□□□□ -2.33
SCN2AQ99250 Y_RNA.203-201ENST00000364106 102 ntBASIC0.47□□□□□ -2.33
SCN2AQ99250 RNU6-597P-201ENST00000365620 102 ntBASIC0.47□□□□□ -2.33
SCN2AQ99250 Y_RNA.512-201ENST00000384518 102 ntBASIC0.47□□□□□ -2.33
SCN2AQ99250 AC002429.1-201ENST00000437672 148 ntBASIC0.47□□□□□ -2.33
SCN2AQ99250 RNU7-185P-201ENST00000459215 60 ntBASIC0.47□□□□□ -2.33
SCN2AQ99250 SCARNA15.1-201ENST00000516384 125 ntBASIC0.47□□□□□ -2.33
SCN2AQ99250 AC018659.1-201ENST00000551083 169 ntBASIC0.47□□□□□ -2.33
SCN2AQ99250 AL360085.1-201ENST00000604713 532 ntBASIC0.47□□□□□ -2.33
SCN2AQ99250 AC011921.3-201ENST00000605540 361 ntBASIC0.47□□□□□ -2.33
SCN2AQ99250 AL589743.1-201ENST00000551932 2712 ntBASIC0.46□□□□□ -2.34
SCN2AQ99250 Y_RNA.76-201ENST00000362931 109 ntBASIC0.46□□□□□ -2.34
SCN2AQ99250 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
SCN2AQ99250 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.46□□□□□ -2.34
SCN2AQ99250 RNU6-1319P-201ENST00000390855 104 ntBASIC0.46□□□□□ -2.34
SCN2AQ99250 RNU6-747P-201ENST00000390928 104 ntBASIC0.46□□□□□ -2.34
SCN2AQ99250 SNORD77.3-201ENST00000391113 65 ntBASIC0.46□□□□□ -2.34
SCN2AQ99250 RNU6-241P-201ENST00000391148 104 ntBASIC0.46□□□□□ -2.34
SCN2AQ99250 RNU2-38P-201ENST00000410856 79 ntBASIC0.46□□□□□ -2.34
SCN2AQ99250 RNU6-177P-201ENST00000411257 104 ntBASIC0.46□□□□□ -2.34
SCN2AQ99250 AC107297.1-201ENST00000459991 176 ntBASIC0.46□□□□□ -2.34
SCN2AQ99250 RNU6-1110P-201ENST00000516462 101 ntBASIC0.46□□□□□ -2.34
SCN2AQ99250 MIR1-1-201ENST00000362147 71 ntBASIC0.45□□□□□ -2.34
SCN2AQ99250 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
SCN2AQ99250 SNORD58.1-201ENST00000391313 66 ntBASIC0.45□□□□□ -2.34
SCN2AQ99250 MIR2909-201ENST00000617113 69 ntBASIC0.45□□□□□ -2.34
SCN2AQ99250 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
SCN2AQ99250 Y_RNA.461-201ENST00000384263 103 ntBASIC0.45□□□□□ -2.34
SCN2AQ99250 MTND5P34-201ENST00000568888 325 ntBASIC0.45□□□□□ -2.34
SCN2AQ99250 uc_338.6-201ENST00000613544 171 ntBASIC0.45□□□□□ -2.34
SCN2AQ99250 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
SCN2AQ99250 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.44□□□□□ -2.34
SCN2AQ99250 SNORA20-201ENST00000384662 132 ntBASIC0.44□□□□□ -2.34
SCN2AQ99250 MIR624-201ENST00000385217 97 ntBASIC0.44□□□□□ -2.34
SCN2AQ99250 RNA5SP261-201ENST00000410536 106 ntBASIC0.44□□□□□ -2.34
SCN2AQ99250 RNU4-43P-201ENST00000410628 137 ntBASIC0.44□□□□□ -2.34
SCN2AQ99250 RNA5SP127-201ENST00000411051 133 ntBASIC0.44□□□□□ -2.34
SCN2AQ99250 ACA64.5-201ENST00000516207 127 ntBASIC0.44□□□□□ -2.34
SCN2AQ99250 MIR3129-201ENST00000581095 76 ntBASIC0.44□□□□□ -2.34
SCN2AQ99250 AC091932.4-201ENST00000623386 200 ntBASIC0.44□□□□□ -2.34
SCN2AQ99250 AC023934.1-201ENST00000574529 2389 ntBASIC0.44□□□□□ -2.34
SCN2AQ99250 MIR18A-201ENST00000362310 71 ntBASIC0.43□□□□□ -2.34
SCN2AQ99250 SNORA63C-201ENST00000364578 129 ntBASIC0.43□□□□□ -2.34
SCN2AQ99250 Y_RNA.299-201ENST00000364973 94 ntBASIC0.43□□□□□ -2.34
SCN2AQ99250 SNORA36.2-201ENST00000384004 127 ntBASIC0.43□□□□□ -2.34
SCN2AQ99250 MIR125B2-201ENST00000385128 89 ntBASIC0.43□□□□□ -2.34
SCN2AQ99250 MIR140-201ENST00000385282 100 ntBASIC0.43□□□□□ -2.34
SCN2AQ99250 RNU7-80P-201ENST00000459562 61 ntBASIC0.43□□□□□ -2.34
SCN2AQ99250 MIR5197-201ENST00000583721 112 ntBASIC0.43□□□□□ -2.34
SCN2AQ99250 AL353765.1-201ENST00000605514 183 ntBASIC0.43□□□□□ -2.34
SCN2AQ99250 uc_338.17-201ENST00000619633 179 ntBASIC0.43□□□□□ -2.34
SCN2AQ99250 Y_RNA.214-201ENST00000364201 112 ntBASIC0.43□□□□□ -2.34
SCN2AQ99250 Y_RNA.572-201ENST00000384757 98 ntBASIC0.43□□□□□ -2.34
SCN2AQ99250 RNU6-381P-201ENST00000391259 108 ntBASIC0.43□□□□□ -2.34
SCN2AQ99250 MIR548H3-201ENST00000408771 118 ntBASIC0.43□□□□□ -2.34
SCN2AQ99250 AC002350.1-201ENST00000490759 375 ntBASIC0.43□□□□□ -2.34
SCN2AQ99250 MIR4771-2-201ENST00000577758 74 ntBASIC0.43□□□□□ -2.34
SCN2AQ99250 AC011195.1-201ENST00000578177 177 ntBASIC0.43□□□□□ -2.34
SCN2AQ99250 MIR4771-1-201ENST00000582617 74 ntBASIC0.43□□□□□ -2.34
SCN2AQ99250 AL136317.1-201ENST00000612653 226 ntBASIC0.43□□□□□ -2.34
SCN2AQ99250 Y_RNA.162-201ENST00000363683 102 ntBASIC0.42□□□□□ -2.34
SCN2AQ99250 RNU6-934P-201ENST00000365154 107 ntBASIC0.42□□□□□ -2.34
SCN2AQ99250 VTRNA1-3-201ENST00000365645 89 ntBASIC0.42□□□□□ -2.34
SCN2AQ99250 MIR1257-201ENST00000408490 117 ntBASIC0.42□□□□□ -2.34
SCN2AQ99250 RNU5E-9P-201ENST00000411164 104 ntBASIC0.42□□□□□ -2.34
SCN2AQ99250 MTND3P2-201ENST00000438452 342 ntBASIC0.42□□□□□ -2.34
SCN2AQ99250 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
SCN2AQ99250 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
SCN2AQ99250 MIR4431-201ENST00000579990 94 ntBASIC0.42□□□□□ -2.34
SCN2AQ99250 RNU2-4P-201ENST00000606190 192 ntBASIC0.42□□□□□ -2.34
SCN2AQ99250 Y_RNA.65-201ENST00000362846 100 ntBASIC0.42□□□□□ -2.34
SCN2AQ99250 Y_RNA.85-201ENST00000363014 111 ntBASIC0.42□□□□□ -2.34
SCN2AQ99250 MIR1302-3-201ENST00000408128 138 ntBASIC0.42□□□□□ -2.34
SCN2AQ99250 AC006461.1-201ENST00000412637 326 ntBASIC0.42□□□□□ -2.34
SCN2AQ99250 RNU7-70P-201ENST00000516941 66 ntBASIC0.42□□□□□ -2.34
SCN2AQ99250 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.42□□□□□ -2.34
SCN2AQ99250 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.42□□□□□ -2.34
SCN2AQ99250 AC090897.1-201ENST00000580909 226 ntBASIC0.42□□□□□ -2.34
SCN2AQ99250 SNORD92-201ENST00000585078 85 ntBASIC0.42□□□□□ -2.34
SCN2AQ99250 AC062037.2-201ENST00000610137 73 ntBASIC0.42□□□□□ -2.34
SCN2AQ99250 RNU6-1082P-201ENST00000364574 107 ntBASIC0.41□□□□□ -2.34
SCN2AQ99250 RNU6-923P-201ENST00000364753 107 ntBASIC0.41□□□□□ -2.34
SCN2AQ99250 Y_RNA.412-201ENST00000384001 104 ntBASIC0.41□□□□□ -2.34
SCN2AQ99250 RNU6-949P-201ENST00000384040 107 ntBASIC0.41□□□□□ -2.34
SCN2AQ99250 RNU6-1228P-201ENST00000391014 107 ntBASIC0.41□□□□□ -2.34
SCN2AQ99250 AC067940.1-201ENST00000458411 300 ntBASIC0.41□□□□□ -2.34
SCN2AQ99250 RNA5SP121-201ENST00000516537 101 ntBASIC0.41□□□□□ -2.34
SCN2AQ99250 AC004812.1-201ENST00000540773 146 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms