Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 RNU7-40P-201ENST00000516397 64 ntBASIC1.12□□□□□ -2.23
SIN3AQ96ST3 RNU7-53P-201ENST00000516705 60 ntBASIC1.12□□□□□ -2.23
SIN3AQ96ST3 RNU6-182P-201ENST00000516970 105 ntBASIC1.12□□□□□ -2.23
SIN3AQ96ST3 MIR8055-201ENST00000610739 97 ntBASIC1.12□□□□□ -2.23
SIN3AQ96ST3 FTX_2.1-201ENST00000618816 94 ntBASIC1.12□□□□□ -2.23
SIN3AQ96ST3 RNU1-124P-201ENST00000363861 145 ntBASIC1.11□□□□□ -2.23
SIN3AQ96ST3 Y_RNA.330-201ENST00000365230 109 ntBASIC1.11□□□□□ -2.23
SIN3AQ96ST3 Y_RNA.351-201ENST00000365436 96 ntBASIC1.11□□□□□ -2.23
SIN3AQ96ST3 Y_RNA.357-201ENST00000365487 109 ntBASIC1.11□□□□□ -2.23
SIN3AQ96ST3 RNU6-125P-201ENST00000384505 107 ntBASIC1.11□□□□□ -2.23
SIN3AQ96ST3 PCNPP3-201ENST00000393579 471 ntBASIC1.11□□□□□ -2.23
SIN3AQ96ST3 MIR548I3-201ENST00000408378 149 ntBASIC1.11□□□□□ -2.23
SIN3AQ96ST3 RNU6-613P-201ENST00000410412 108 ntBASIC1.11□□□□□ -2.23
SIN3AQ96ST3 RNU6-1190P-201ENST00000410811 104 ntBASIC1.11□□□□□ -2.23
SIN3AQ96ST3 snoU13.18-201ENST00000459483 104 ntBASIC1.11□□□□□ -2.23
SIN3AQ96ST3 AL020996.3-201ENST00000606617 222 ntBASIC1.11□□□□□ -2.23
SIN3AQ96ST3 AC091932.4-201ENST00000623386 200 ntBASIC1.11□□□□□ -2.23
SIN3AQ96ST3 MIR3658-201ENST00000636291 56 ntBASIC1.11□□□□□ -2.23
SIN3AQ96ST3 MIR342-201ENST00000362212 99 ntBASIC1.1□□□□□ -2.23
SIN3AQ96ST3 RNU6-1135P-201ENST00000411083 103 ntBASIC1.1□□□□□ -2.23
SIN3AQ96ST3 HMGN1P33-201ENST00000432945 451 ntBASIC1.1□□□□□ -2.23
SIN3AQ96ST3 RNU7-90P-201ENST00000459216 62 ntBASIC1.1□□□□□ -2.23
SIN3AQ96ST3 HSPE1P19-201ENST00000603327 295 ntBASIC1.1□□□□□ -2.23
SIN3AQ96ST3 Z97988.1-201ENST00000637697 135 ntBASIC1.1□□□□□ -2.23
SIN3AQ96ST3 RNU6-396P-201ENST00000365369 105 ntBASIC1.09□□□□□ -2.23
SIN3AQ96ST3 RNA5SP95-201ENST00000410319 137 ntBASIC1.09□□□□□ -2.23
SIN3AQ96ST3 MIR2115-201ENST00000516657 100 ntBASIC1.09□□□□□ -2.23
SIN3AQ96ST3 RNU6-1149P-201ENST00000516810 97 ntBASIC1.09□□□□□ -2.23
SIN3AQ96ST3 AC036111.3-201ENST00000526389 112 ntBASIC1.09□□□□□ -2.23
SIN3AQ96ST3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.09□□□□□ -2.23
SIN3AQ96ST3 MTND5P32-201ENST00000560711 1802 ntBASIC1.09□□□□□ -2.23
SIN3AQ96ST3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
SIN3AQ96ST3 Y_RNA.52-201ENST00000362760 96 ntBASIC1.08□□□□□ -2.24
SIN3AQ96ST3 Y_RNA.150-201ENST00000363562 102 ntBASIC1.08□□□□□ -2.24
SIN3AQ96ST3 Y_RNA.272-201ENST00000364696 102 ntBASIC1.08□□□□□ -2.24
SIN3AQ96ST3 SNORA26.6-201ENST00000391256 115 ntBASIC1.08□□□□□ -2.24
SIN3AQ96ST3 SNORA75.5-201ENST00000391291 81 ntBASIC1.08□□□□□ -2.24
SIN3AQ96ST3 MIR548J-201ENST00000408833 112 ntBASIC1.08□□□□□ -2.24
SIN3AQ96ST3 AC244023.1-201ENST00000426884 112 ntBASIC1.08□□□□□ -2.24
SIN3AQ96ST3 RNU7-45P-201ENST00000459460 63 ntBASIC1.08□□□□□ -2.24
SIN3AQ96ST3 RNU7-80P-201ENST00000459562 61 ntBASIC1.08□□□□□ -2.24
SIN3AQ96ST3 CYP3A137P-201ENST00000562436 69 ntBASIC1.08□□□□□ -2.24
SIN3AQ96ST3 AC023827.1-201ENST00000569247 97 ntBASIC1.08□□□□□ -2.24
SIN3AQ96ST3 MIR3646-201ENST00000578301 84 ntBASIC1.08□□□□□ -2.24
SIN3AQ96ST3 AC131055.1-201ENST00000584626 316 ntBASIC1.08□□□□□ -2.24
SIN3AQ96ST3 AC242498.1-201ENST00000604134 111 ntBASIC1.08□□□□□ -2.24
SIN3AQ96ST3 AL596211.1-201ENST00000569873 2277 ntBASIC1.07□□□□□ -2.24
SIN3AQ96ST3 RNY1P11-201ENST00000363759 113 ntBASIC1.07□□□□□ -2.24
SIN3AQ96ST3 MT-TN-201ENST00000387400 73 ntBASIC1.07□□□□□ -2.24
SIN3AQ96ST3 SNORD124-201ENST00000459577 104 ntBASIC1.07□□□□□ -2.24
SIN3AQ96ST3 DNAJC19P2-201ENST00000593340 302 ntBASIC1.07□□□□□ -2.24
SIN3AQ96ST3 MIR6844-201ENST00000637122 62 ntBASIC1.07□□□□□ -2.24
SIN3AQ96ST3 SNORA1.1-201ENST00000364671 133 ntBASIC1.06□□□□□ -2.24
SIN3AQ96ST3 Y_RNA.454-201ENST00000384224 113 ntBASIC1.06□□□□□ -2.24
SIN3AQ96ST3 RNU6-886P-201ENST00000384319 105 ntBASIC1.06□□□□□ -2.24
SIN3AQ96ST3 RNU6-588P-201ENST00000410281 105 ntBASIC1.06□□□□□ -2.24
SIN3AQ96ST3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.06□□□□□ -2.24
SIN3AQ96ST3 RNA5SP236-201ENST00000516169 116 ntBASIC1.06□□□□□ -2.24
SIN3AQ96ST3 AC098479.1-201ENST00000609225 154 ntBASIC1.06□□□□□ -2.24
SIN3AQ96ST3 AC106800.4-201ENST00000614905 153 ntBASIC1.06□□□□□ -2.24
SIN3AQ96ST3 RMST_2.1-201ENST00000617263 136 ntBASIC1.06□□□□□ -2.24
SIN3AQ96ST3 MIR377-201ENST00000362145 69 ntBASIC1.05□□□□□ -2.24
SIN3AQ96ST3 MIR302B-201ENST00000362188 73 ntBASIC1.05□□□□□ -2.24
SIN3AQ96ST3 RNU6-818P-201ENST00000364837 108 ntBASIC1.05□□□□□ -2.24
SIN3AQ96ST3 Y_RNA.497-201ENST00000384447 98 ntBASIC1.05□□□□□ -2.24
SIN3AQ96ST3 RNU6-205P-201ENST00000390858 107 ntBASIC1.05□□□□□ -2.24
SIN3AQ96ST3 RNU6-394P-201ENST00000410735 107 ntBASIC1.05□□□□□ -2.24
SIN3AQ96ST3 RNU6-602P-201ENST00000411155 105 ntBASIC1.05□□□□□ -2.24
SIN3AQ96ST3 AC004941.2-201ENST00000427009 228 ntBASIC1.05□□□□□ -2.24
SIN3AQ96ST3 RPL39P28-201ENST00000465655 155 ntBASIC1.05□□□□□ -2.24
SIN3AQ96ST3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.05□□□□□ -2.24
SIN3AQ96ST3 MIR6717-201ENST00000622747 73 ntBASIC1.05□□□□□ -2.24
SIN3AQ96ST3 Y_RNA.168-201ENST00000363740 102 ntBASIC1.04□□□□□ -2.24
SIN3AQ96ST3 Y_RNA.270-201ENST00000364693 104 ntBASIC1.04□□□□□ -2.24
SIN3AQ96ST3 RNU1-133P-201ENST00000364867 167 ntBASIC1.04□□□□□ -2.24
SIN3AQ96ST3 RNU6-580P-201ENST00000365159 107 ntBASIC1.04□□□□□ -2.24
SIN3AQ96ST3 RNU6-1130P-201ENST00000365434 107 ntBASIC1.04□□□□□ -2.24
SIN3AQ96ST3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SIN3AQ96ST3 RNU2-60P-201ENST00000517290 128 ntBASIC1.04□□□□□ -2.24
SIN3AQ96ST3 MIR4264-201ENST00000583520 66 ntBASIC1.04□□□□□ -2.24
SIN3AQ96ST3 AC104465.1-201ENST00000611365 139 ntBASIC1.04□□□□□ -2.24
SIN3AQ96ST3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SIN3AQ96ST3 SNORD113.3-201ENST00000364630 78 ntBASIC1.03□□□□□ -2.24
SIN3AQ96ST3 RNU6-42P-201ENST00000384165 107 ntBASIC1.03□□□□□ -2.24
SIN3AQ96ST3 SNORA2B-201ENST00000384583 137 ntBASIC1.03□□□□□ -2.24
SIN3AQ96ST3 Y_RNA.555-201ENST00000384673 110 ntBASIC1.03□□□□□ -2.24
SIN3AQ96ST3 SNORD38B-201ENST00000384690 67 ntBASIC1.03□□□□□ -2.24
SIN3AQ96ST3 MIR146A-201ENST00000385201 99 ntBASIC1.03□□□□□ -2.24
SIN3AQ96ST3 RNU6-907P-201ENST00000390924 102 ntBASIC1.03□□□□□ -2.24
SIN3AQ96ST3 RNA5SP220-201ENST00000516298 104 ntBASIC1.03□□□□□ -2.24
SIN3AQ96ST3 AC013244.2-201ENST00000603396 103 ntBASIC1.03□□□□□ -2.24
SIN3AQ96ST3 RNU6-94P-201ENST00000607728 107 ntBASIC1.03□□□□□ -2.24
SIN3AQ96ST3 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.03□□□□□ -2.24
SIN3AQ96ST3 SNORD38B-202ENST00000625943 69 ntBASIC1.03□□□□□ -2.24
SIN3AQ96ST3 AL391516.1-201ENST00000554380 2449 ntBASIC1.03□□□□□ -2.25
SIN3AQ96ST3 Y_RNA.251-201ENST00000364551 99 ntBASIC1.02□□□□□ -2.25
SIN3AQ96ST3 RNU6-804P-201ENST00000384286 107 ntBASIC1.02□□□□□ -2.25
SIN3AQ96ST3 RNU6-1319P-201ENST00000390855 104 ntBASIC1.02□□□□□ -2.25
SIN3AQ96ST3 RNU6-747P-201ENST00000390928 104 ntBASIC1.02□□□□□ -2.25
SIN3AQ96ST3 Y_RNA.580-201ENST00000391004 95 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms