Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC021506.2-201ENST00000612354 169 ntBASIC2.5□□□□□ -2.01
SYNGAP1Q96PV0 MIR6132-201ENST00000622083 109 ntBASIC2.5□□□□□ -2.01
SYNGAP1Q96PV0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
SYNGAP1Q96PV0 MIR494-201ENST00000349529 81 ntBASIC2.49□□□□□ -2.01
SYNGAP1Q96PV0 RNA5SP173-201ENST00000364857 136 ntBASIC2.49□□□□□ -2.01
SYNGAP1Q96PV0 Y_RNA.360-201ENST00000365512 102 ntBASIC2.49□□□□□ -2.01
SYNGAP1Q96PV0 Y_RNA.470-201ENST00000384307 117 ntBASIC2.49□□□□□ -2.01
SYNGAP1Q96PV0 RNU6-616P-201ENST00000384353 107 ntBASIC2.49□□□□□ -2.01
SYNGAP1Q96PV0 SNORD28B-201ENST00000390993 75 ntBASIC2.49□□□□□ -2.01
SYNGAP1Q96PV0 RNU6-1190P-201ENST00000410811 104 ntBASIC2.49□□□□□ -2.01
SYNGAP1Q96PV0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SYNGAP1Q96PV0 snoU13.27-201ENST00000459278 104 ntBASIC2.49□□□□□ -2.01
SYNGAP1Q96PV0 RNU7-61P-201ENST00000515897 61 ntBASIC2.49□□□□□ -2.01
SYNGAP1Q96PV0 MIR548AE2-201ENST00000583456 67 ntBASIC2.49□□□□□ -2.01
SYNGAP1Q96PV0 FAM106DP-201ENST00000586416 501 ntBASIC2.49□□□□□ -2.01
SYNGAP1Q96PV0 MIR6845-201ENST00000613182 61 ntBASIC2.49□□□□□ -2.01
SYNGAP1Q96PV0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
SYNGAP1Q96PV0 RNU6-1067P-201ENST00000384752 107 ntBASIC2.48□□□□□ -2.01
SYNGAP1Q96PV0 SNORA31.11-201ENST00000516528 139 ntBASIC2.48□□□□□ -2.01
SYNGAP1Q96PV0 RNU6-158P-201ENST00000517104 100 ntBASIC2.48□□□□□ -2.01
SYNGAP1Q96PV0 DNAJC19P9-201ENST00000555084 351 ntBASIC2.48□□□□□ -2.01
SYNGAP1Q96PV0 AL512310.12-203ENST00000640543 90 ntBASIC2.48□□□□□ -2.01
SYNGAP1Q96PV0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
SYNGAP1Q96PV0 ZNF355P-201ENST00000427301 3216 ntBASIC2.48□□□□□ -2.01
SYNGAP1Q96PV0 SNORD115-19-201ENST00000363098 82 ntBASIC2.47□□□□□ -2.01
SYNGAP1Q96PV0 SNORD115-18-201ENST00000363293 82 ntBASIC2.47□□□□□ -2.01
SYNGAP1Q96PV0 RNU6-832P-201ENST00000363319 107 ntBASIC2.47□□□□□ -2.01
SYNGAP1Q96PV0 SNORD115-17-201ENST00000364612 82 ntBASIC2.47□□□□□ -2.01
SYNGAP1Q96PV0 SNORA67.3-201ENST00000384366 140 ntBASIC2.47□□□□□ -2.01
SYNGAP1Q96PV0 SNORA18-201ENST00000384416 132 ntBASIC2.47□□□□□ -2.01
SYNGAP1Q96PV0 MIR577-201ENST00000385196 96 ntBASIC2.47□□□□□ -2.01
SYNGAP1Q96PV0 SNORA48.1-201ENST00000390879 135 ntBASIC2.47□□□□□ -2.01
SYNGAP1Q96PV0 RNA5SP57-201ENST00000459463 123 ntBASIC2.47□□□□□ -2.01
SYNGAP1Q96PV0 Y_RNA.659-201ENST00000515994 113 ntBASIC2.47□□□□□ -2.01
SYNGAP1Q96PV0 AC026421.1-201ENST00000519101 163 ntBASIC2.47□□□□□ -2.01
SYNGAP1Q96PV0 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.47□□□□□ -2.01
SYNGAP1Q96PV0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
SYNGAP1Q96PV0 MIRLET7G-201ENST00000362280 84 ntBASIC2.46□□□□□ -2.02
SYNGAP1Q96PV0 RNU6-112P-201ENST00000363599 104 ntBASIC2.46□□□□□ -2.02
SYNGAP1Q96PV0 SNORA67.1-201ENST00000364749 141 ntBASIC2.46□□□□□ -2.02
SYNGAP1Q96PV0 RNU6-573P-201ENST00000383938 106 ntBASIC2.46□□□□□ -2.02
SYNGAP1Q96PV0 MIR450A2-201ENST00000385022 100 ntBASIC2.46□□□□□ -2.02
SYNGAP1Q96PV0 MIR660-201ENST00000385235 97 ntBASIC2.46□□□□□ -2.02
SYNGAP1Q96PV0 MIR524-201ENST00000385242 87 ntBASIC2.46□□□□□ -2.02
SYNGAP1Q96PV0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SYNGAP1Q96PV0 RNU6-644P-201ENST00000391155 98 ntBASIC2.46□□□□□ -2.02
SYNGAP1Q96PV0 HMGN2P39-201ENST00000398005 273 ntBASIC2.46□□□□□ -2.02
SYNGAP1Q96PV0 AL023284.1-201ENST00000403956 276 ntBASIC2.46□□□□□ -2.02
SYNGAP1Q96PV0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.46□□□□□ -2.02
SYNGAP1Q96PV0 RNA5SP481-201ENST00000516814 122 ntBASIC2.46□□□□□ -2.02
SYNGAP1Q96PV0 MIR4694-201ENST00000578534 80 ntBASIC2.46□□□□□ -2.02
SYNGAP1Q96PV0 AC012531.4-201ENST00000616509 177 ntBASIC2.46□□□□□ -2.02
SYNGAP1Q96PV0 MIR6717-201ENST00000622747 73 ntBASIC2.46□□□□□ -2.02
SYNGAP1Q96PV0 MAPK10-266ENST00000641066 6555 ntBASIC2.46□□□□□ -2.02
SYNGAP1Q96PV0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SYNGAP1Q96PV0 MIR526A1-201ENST00000384897 85 ntBASIC2.45□□□□□ -2.02
SYNGAP1Q96PV0 RNU6-913P-201ENST00000390913 95 ntBASIC2.45□□□□□ -2.02
SYNGAP1Q96PV0 SNORA48.3-201ENST00000391081 134 ntBASIC2.45□□□□□ -2.02
SYNGAP1Q96PV0 HMGN1P33-201ENST00000432945 451 ntBASIC2.45□□□□□ -2.02
SYNGAP1Q96PV0 RNU6-521P-201ENST00000516663 105 ntBASIC2.45□□□□□ -2.02
SYNGAP1Q96PV0 SUB1P4-201ENST00000566062 339 ntBASIC2.45□□□□□ -2.02
SYNGAP1Q96PV0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SYNGAP1Q96PV0 AL513423.1-201ENST00000621695 132 ntBASIC2.45□□□□□ -2.02
SYNGAP1Q96PV0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.45□□□□□ -2.02
SYNGAP1Q96PV0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SYNGAP1Q96PV0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SYNGAP1Q96PV0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.45□□□□□ -2.02
SYNGAP1Q96PV0 AC005336.3-201ENST00000623833 2679 ntBASIC2.44□□□□□ -2.02
SYNGAP1Q96PV0 RNA5SP220-201ENST00000516298 104 ntBASIC2.44□□□□□ -2.02
SYNGAP1Q96PV0 RNA5SP82-201ENST00000516707 92 ntBASIC2.44□□□□□ -2.02
SYNGAP1Q96PV0 RNU6-170P-201ENST00000362832 104 ntBASIC2.43□□□□□ -2.02
SYNGAP1Q96PV0 RNU6-457P-201ENST00000363999 107 ntBASIC2.43□□□□□ -2.02
SYNGAP1Q96PV0 AP1B1P2-201ENST00000416196 106 ntBASIC2.43□□□□□ -2.02
SYNGAP1Q96PV0 RPL23AP6-201ENST00000446637 472 ntBASIC2.43□□□□□ -2.02
SYNGAP1Q96PV0 RN7SKP12-201ENST00000516275 143 ntBASIC2.43□□□□□ -2.02
SYNGAP1Q96PV0 MIR548Z-201ENST00000584743 97 ntBASIC2.43□□□□□ -2.02
SYNGAP1Q96PV0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.43□□□□□ -2.02
SYNGAP1Q96PV0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
SYNGAP1Q96PV0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
SYNGAP1Q96PV0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
SYNGAP1Q96PV0 SNORA1.1-201ENST00000364671 133 ntBASIC2.42□□□□□ -2.02
SYNGAP1Q96PV0 RNU6-296P-201ENST00000384608 107 ntBASIC2.42□□□□□ -2.02
SYNGAP1Q96PV0 RNU6-679P-201ENST00000391003 106 ntBASIC2.42□□□□□ -2.02
SYNGAP1Q96PV0 AC245047.7-201ENST00000440265 293 ntBASIC2.42□□□□□ -2.02
SYNGAP1Q96PV0 RNA5SP61-201ENST00000516453 100 ntBASIC2.42□□□□□ -2.02
SYNGAP1Q96PV0 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.42□□□□□ -2.02
SYNGAP1Q96PV0 AC022254.1-201ENST00000567857 235 ntBASIC2.42□□□□□ -2.02
SYNGAP1Q96PV0 AL020996.3-201ENST00000606617 222 ntBASIC2.42□□□□□ -2.02
SYNGAP1Q96PV0 U7.3-201ENST00000616123 62 ntBASIC2.42□□□□□ -2.02
SYNGAP1Q96PV0 U1.36-201ENST00000620684 176 ntBASIC2.42□□□□□ -2.02
SYNGAP1Q96PV0 SNORD45B-201ENST00000364617 72 ntBASIC2.42□□□□□ -2.02
SYNGAP1Q96PV0 Y_RNA.290-201ENST00000364879 114 ntBASIC2.42□□□□□ -2.02
SYNGAP1Q96PV0 RNU6-820P-201ENST00000384273 107 ntBASIC2.42□□□□□ -2.02
SYNGAP1Q96PV0 SNORD14A-201ENST00000606526 91 ntBASIC2.42□□□□□ -2.02
SYNGAP1Q96PV0 MIR1245B-201ENST00000636115 69 ntBASIC2.42□□□□□ -2.02
SYNGAP1Q96PV0 SNORD115-2-201ENST00000362842 82 ntBASIC2.41□□□□□ -2.02
SYNGAP1Q96PV0 SNORD115-20-201ENST00000365099 82 ntBASIC2.41□□□□□ -2.02
SYNGAP1Q96PV0 SNORA26.6-201ENST00000391256 115 ntBASIC2.41□□□□□ -2.02
SYNGAP1Q96PV0 AC004941.2-201ENST00000427009 228 ntBASIC2.41□□□□□ -2.02
SYNGAP1Q96PV0 RNU7-73P-201ENST00000458743 63 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms