Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 RNU6-457P-201ENST00000363999 107 ntBASIC2.02□□□□□ -2.09
ZSWIM3Q96MP5 Y_RNA.466-201ENST00000384294 113 ntBASIC2.02□□□□□ -2.09
ZSWIM3Q96MP5 RNU6-816P-201ENST00000390914 107 ntBASIC2.02□□□□□ -2.09
ZSWIM3Q96MP5 RNU6-1268P-201ENST00000391214 107 ntBASIC2.02□□□□□ -2.09
ZSWIM3Q96MP5 RNU6-1239P-201ENST00000391310 107 ntBASIC2.02□□□□□ -2.09
ZSWIM3Q96MP5 RNU4-69P-201ENST00000410677 143 ntBASIC2.02□□□□□ -2.09
ZSWIM3Q96MP5 RNU6-1190P-201ENST00000410811 104 ntBASIC2.02□□□□□ -2.09
ZSWIM3Q96MP5 AL161935.2-201ENST00000414627 60 ntBASIC2.02□□□□□ -2.09
ZSWIM3Q96MP5 RPL39P25-201ENST00000449384 154 ntBASIC2.02□□□□□ -2.09
ZSWIM3Q96MP5 MIR1270-201ENST00000459320 83 ntBASIC2.02□□□□□ -2.09
ZSWIM3Q96MP5 SNORA40.13-201ENST00000516379 120 ntBASIC2.02□□□□□ -2.09
ZSWIM3Q96MP5 MIR514B-201ENST00000516774 80 ntBASIC2.02□□□□□ -2.09
ZSWIM3Q96MP5 RNU6-958P-201ENST00000516995 106 ntBASIC2.02□□□□□ -2.09
ZSWIM3Q96MP5 MIR3152-201ENST00000579801 74 ntBASIC2.02□□□□□ -2.09
ZSWIM3Q96MP5 MIR4448-201ENST00000584360 86 ntBASIC2.02□□□□□ -2.09
ZSWIM3Q96MP5 Y_RNA.773-201ENST00000607168 90 ntBASIC2.02□□□□□ -2.09
ZSWIM3Q96MP5 MIR6717-201ENST00000622747 73 ntBASIC2.02□□□□□ -2.09
ZSWIM3Q96MP5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
ZSWIM3Q96MP5 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
ZSWIM3Q96MP5 SNORA17.3-201ENST00000391159 129 ntBASIC2.01□□□□□ -2.09
ZSWIM3Q96MP5 RNU2-40P-201ENST00000410833 196 ntBASIC2.01□□□□□ -2.09
ZSWIM3Q96MP5 RPL23AP6-201ENST00000446637 472 ntBASIC2.01□□□□□ -2.09
ZSWIM3Q96MP5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.01□□□□□ -2.09
ZSWIM3Q96MP5 RNU7-67P-201ENST00000459003 62 ntBASIC2.01□□□□□ -2.09
ZSWIM3Q96MP5 RNU7-113P-201ENST00000459273 62 ntBASIC2.01□□□□□ -2.09
ZSWIM3Q96MP5 RNU6-917P-201ENST00000516294 104 ntBASIC2.01□□□□□ -2.09
ZSWIM3Q96MP5 SNORA72.7-201ENST00000516349 94 ntBASIC2.01□□□□□ -2.09
ZSWIM3Q96MP5 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.01□□□□□ -2.09
ZSWIM3Q96MP5 RNU7-43P-201ENST00000516554 64 ntBASIC2.01□□□□□ -2.09
ZSWIM3Q96MP5 RNU6-363P-201ENST00000362895 105 ntBASIC2□□□□□ -2.09
ZSWIM3Q96MP5 RNU6-203P-201ENST00000384038 104 ntBASIC2□□□□□ -2.09
ZSWIM3Q96MP5 Y_RNA.470-201ENST00000384307 117 ntBASIC2□□□□□ -2.09
ZSWIM3Q96MP5 snoU13.16-201ENST00000459350 104 ntBASIC2□□□□□ -2.09
ZSWIM3Q96MP5 FAM106DP-201ENST00000586416 501 ntBASIC2□□□□□ -2.09
ZSWIM3Q96MP5 MIR1255B1-201ENST00000636325 63 ntBASIC2□□□□□ -2.09
ZSWIM3Q96MP5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
ZSWIM3Q96MP5 RNA5SP160-201ENST00000364866 120 ntBASIC1.99□□□□□ -2.09
ZSWIM3Q96MP5 RNA5SP138-201ENST00000365098 114 ntBASIC1.99□□□□□ -2.09
ZSWIM3Q96MP5 Y_RNA.507-201ENST00000384500 99 ntBASIC1.99□□□□□ -2.09
ZSWIM3Q96MP5 MIR653-201ENST00000385279 96 ntBASIC1.99□□□□□ -2.09
ZSWIM3Q96MP5 RNY4P30-201ENST00000410216 95 ntBASIC1.99□□□□□ -2.09
ZSWIM3Q96MP5 AL353813.1-201ENST00000440700 253 ntBASIC1.99□□□□□ -2.09
ZSWIM3Q96MP5 RNA5SP233-201ENST00000459153 113 ntBASIC1.99□□□□□ -2.09
ZSWIM3Q96MP5 RNU6-109P-201ENST00000516364 107 ntBASIC1.99□□□□□ -2.09
ZSWIM3Q96MP5 RNU6-184P-201ENST00000516514 107 ntBASIC1.99□□□□□ -2.09
ZSWIM3Q96MP5 AC141557.1-201ENST00000540982 400 ntBASIC1.99□□□□□ -2.09
ZSWIM3Q96MP5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.99□□□□□ -2.09
ZSWIM3Q96MP5 MIR4694-201ENST00000578534 80 ntBASIC1.99□□□□□ -2.09
ZSWIM3Q96MP5 MIR548AE2-201ENST00000583456 67 ntBASIC1.99□□□□□ -2.09
ZSWIM3Q96MP5 MIR8055-201ENST00000610739 97 ntBASIC1.99□□□□□ -2.09
ZSWIM3Q96MP5 Y_RNA.93-201ENST00000363066 109 ntBASIC1.98□□□□□ -2.09
ZSWIM3Q96MP5 RNU6-1099P-201ENST00000363533 107 ntBASIC1.98□□□□□ -2.09
ZSWIM3Q96MP5 RNU4-67P-201ENST00000364569 141 ntBASIC1.98□□□□□ -2.09
ZSWIM3Q96MP5 Y_RNA.338-201ENST00000365320 114 ntBASIC1.98□□□□□ -2.09
ZSWIM3Q96MP5 MIR488-201ENST00000365739 83 ntBASIC1.98□□□□□ -2.09
ZSWIM3Q96MP5 RNU6-1067P-201ENST00000384752 107 ntBASIC1.98□□□□□ -2.09
ZSWIM3Q96MP5 MIR1302-4-201ENST00000408701 150 ntBASIC1.98□□□□□ -2.09
ZSWIM3Q96MP5 MTATP8P2-201ENST00000435212 202 ntBASIC1.98□□□□□ -2.09
ZSWIM3Q96MP5 RNU6-717P-201ENST00000459076 104 ntBASIC1.98□□□□□ -2.09
ZSWIM3Q96MP5 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.98□□□□□ -2.09
ZSWIM3Q96MP5 uc_338.20-201ENST00000621563 178 ntBASIC1.98□□□□□ -2.09
ZSWIM3Q96MP5 RNY3P2-201ENST00000362918 102 ntBASIC1.97□□□□□ -2.09
ZSWIM3Q96MP5 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.97□□□□□ -2.09
ZSWIM3Q96MP5 MIR676-201ENST00000390702 67 ntBASIC1.97□□□□□ -2.09
ZSWIM3Q96MP5 AC108667.1-201ENST00000428618 249 ntBASIC1.97□□□□□ -2.09
ZSWIM3Q96MP5 RNU1-40P-201ENST00000516816 164 ntBASIC1.97□□□□□ -2.09
ZSWIM3Q96MP5 RNU1-97P-201ENST00000516872 164 ntBASIC1.97□□□□□ -2.09
ZSWIM3Q96MP5 RNA5SP364-201ENST00000516938 78 ntBASIC1.97□□□□□ -2.09
ZSWIM3Q96MP5 AC022254.1-201ENST00000567857 235 ntBASIC1.97□□□□□ -2.09
ZSWIM3Q96MP5 MIR4764-201ENST00000580680 88 ntBASIC1.97□□□□□ -2.09
ZSWIM3Q96MP5 MIR8081-201ENST00000611533 95 ntBASIC1.97□□□□□ -2.09
ZSWIM3Q96MP5 AC008133.2-201ENST00000624540 351 ntBASIC1.97□□□□□ -2.09
ZSWIM3Q96MP5 Z97988.1-201ENST00000637697 135 ntBASIC1.97□□□□□ -2.09
ZSWIM3Q96MP5 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
ZSWIM3Q96MP5 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
ZSWIM3Q96MP5 Y_RNA.360-201ENST00000365512 102 ntBASIC1.96□□□□□ -2.1
ZSWIM3Q96MP5 RNU6-49P-201ENST00000384256 107 ntBASIC1.96□□□□□ -2.1
ZSWIM3Q96MP5 MIR9-3-201ENST00000385084 90 ntBASIC1.96□□□□□ -2.1
ZSWIM3Q96MP5 MIR577-201ENST00000385196 96 ntBASIC1.96□□□□□ -2.1
ZSWIM3Q96MP5 AC004965.1-201ENST00000413033 213 ntBASIC1.96□□□□□ -2.1
ZSWIM3Q96MP5 RPS29P11-201ENST00000496507 171 ntBASIC1.96□□□□□ -2.1
ZSWIM3Q96MP5 RNA5SP33-201ENST00000516687 98 ntBASIC1.96□□□□□ -2.1
ZSWIM3Q96MP5 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.96□□□□□ -2.1
ZSWIM3Q96MP5 AL627230.6-201ENST00000611129 280 ntBASIC1.96□□□□□ -2.1
ZSWIM3Q96MP5 MIR8065-201ENST00000620577 100 ntBASIC1.96□□□□□ -2.1
ZSWIM3Q96MP5 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.96□□□□□ -2.1
ZSWIM3Q96MP5 MIR2052-201ENST00000636055 55 ntBASIC1.96□□□□□ -2.1
ZSWIM3Q96MP5 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
ZSWIM3Q96MP5 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
ZSWIM3Q96MP5 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
ZSWIM3Q96MP5 Y_RNA.107-201ENST00000363190 121 ntBASIC1.95□□□□□ -2.1
ZSWIM3Q96MP5 RNU4-36P-201ENST00000364294 144 ntBASIC1.95□□□□□ -2.1
ZSWIM3Q96MP5 Y_RNA.377-201ENST00000365644 108 ntBASIC1.95□□□□□ -2.1
ZSWIM3Q96MP5 RNA5SP338-201ENST00000410495 85 ntBASIC1.95□□□□□ -2.1
ZSWIM3Q96MP5 RNU6-733P-201ENST00000410759 104 ntBASIC1.95□□□□□ -2.1
ZSWIM3Q96MP5 AC096949.1-201ENST00000412047 152 ntBASIC1.95□□□□□ -2.1
ZSWIM3Q96MP5 RPS3AP1-201ENST00000413190 320 ntBASIC1.95□□□□□ -2.1
ZSWIM3Q96MP5 HMGN1P33-201ENST00000432945 451 ntBASIC1.95□□□□□ -2.1
ZSWIM3Q96MP5 RNU6-970P-201ENST00000516312 107 ntBASIC1.95□□□□□ -2.1
ZSWIM3Q96MP5 Y_RNA.676-201ENST00000516393 96 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 192 ms