Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 MIR548I3-201ENST00000408378 149 ntBASIC0.48□□□□□ -2.33
RPGRIP1Q96KN7 RNU7-56P-201ENST00000458744 62 ntBASIC0.48□□□□□ -2.33
RPGRIP1Q96KN7 RNA5SP153-201ENST00000516498 76 ntBASIC0.48□□□□□ -2.33
RPGRIP1Q96KN7 AC097639.2-201ENST00000603159 172 ntBASIC0.48□□□□□ -2.33
RPGRIP1Q96KN7 Y_RNA.410-201ENST00000383992 113 ntBASIC0.47□□□□□ -2.33
RPGRIP1Q96KN7 MIR140-201ENST00000385282 100 ntBASIC0.47□□□□□ -2.33
RPGRIP1Q96KN7 SNORD77.3-201ENST00000391113 65 ntBASIC0.47□□□□□ -2.33
RPGRIP1Q96KN7 RNA5SP63-201ENST00000391225 112 ntBASIC0.47□□□□□ -2.33
RPGRIP1Q96KN7 RNU6-1165P-201ENST00000410119 107 ntBASIC0.47□□□□□ -2.33
RPGRIP1Q96KN7 MIR18B-201ENST00000454574 71 ntBASIC0.47□□□□□ -2.33
RPGRIP1Q96KN7 snoU13.2-201ENST00000459201 104 ntBASIC0.47□□□□□ -2.33
RPGRIP1Q96KN7 MTATP8P1-201ENST00000467115 207 ntBASIC0.47□□□□□ -2.33
RPGRIP1Q96KN7 RNU6-635P-201ENST00000516651 102 ntBASIC0.47□□□□□ -2.33
RPGRIP1Q96KN7 MIR3612-201ENST00000579753 87 ntBASIC0.47□□□□□ -2.33
RPGRIP1Q96KN7 MIR342-201ENST00000362212 99 ntBASIC0.46□□□□□ -2.34
RPGRIP1Q96KN7 MIR18A-201ENST00000362310 71 ntBASIC0.46□□□□□ -2.34
RPGRIP1Q96KN7 Y_RNA.294-201ENST00000364916 102 ntBASIC0.46□□□□□ -2.34
RPGRIP1Q96KN7 Y_RNA.304-201ENST00000365011 112 ntBASIC0.46□□□□□ -2.34
RPGRIP1Q96KN7 SNORA1-201ENST00000384107 130 ntBASIC0.46□□□□□ -2.34
RPGRIP1Q96KN7 MIR616-201ENST00000385293 97 ntBASIC0.46□□□□□ -2.34
RPGRIP1Q96KN7 MIR938-201ENST00000401216 83 ntBASIC0.46□□□□□ -2.34
RPGRIP1Q96KN7 Y_RNA.590-201ENST00000410140 107 ntBASIC0.46□□□□□ -2.34
RPGRIP1Q96KN7 RNA5SP285-201ENST00000516619 119 ntBASIC0.46□□□□□ -2.34
RPGRIP1Q96KN7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.46□□□□□ -2.34
RPGRIP1Q96KN7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
RPGRIP1Q96KN7 MIR335-201ENST00000362173 94 ntBASIC0.45□□□□□ -2.34
RPGRIP1Q96KN7 RNU6-238P-201ENST00000363313 106 ntBASIC0.45□□□□□ -2.34
RPGRIP1Q96KN7 Y_RNA.199-201ENST00000364014 102 ntBASIC0.45□□□□□ -2.34
RPGRIP1Q96KN7 Y_RNA.274-201ENST00000364714 101 ntBASIC0.45□□□□□ -2.34
RPGRIP1Q96KN7 SNORA50A-201ENST00000384225 134 ntBASIC0.45□□□□□ -2.34
RPGRIP1Q96KN7 Y_RNA.483-201ENST00000384380 101 ntBASIC0.45□□□□□ -2.34
RPGRIP1Q96KN7 SNORD12C-201ENST00000386307 89 ntBASIC0.45□□□□□ -2.34
RPGRIP1Q96KN7 MT-TW-201ENST00000387382 68 ntBASIC0.45□□□□□ -2.34
RPGRIP1Q96KN7 RNU6-1228P-201ENST00000391014 107 ntBASIC0.45□□□□□ -2.34
RPGRIP1Q96KN7 Y_RNA.679-201ENST00000516416 91 ntBASIC0.45□□□□□ -2.34
RPGRIP1Q96KN7 AL365265.1-201ENST00000621045 234 ntBASIC0.45□□□□□ -2.34
RPGRIP1Q96KN7 Y_RNA.23-201ENST00000362496 106 ntBASIC0.44□□□□□ -2.34
RPGRIP1Q96KN7 MIR563-201ENST00000385080 79 ntBASIC0.44□□□□□ -2.34
RPGRIP1Q96KN7 RNU7-185P-201ENST00000459215 60 ntBASIC0.44□□□□□ -2.34
RPGRIP1Q96KN7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.44□□□□□ -2.34
RPGRIP1Q96KN7 AL442663.2-201ENST00000554385 511 ntBASIC0.44□□□□□ -2.34
RPGRIP1Q96KN7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.44□□□□□ -2.34
RPGRIP1Q96KN7 MIR4282-201ENST00000583613 67 ntBASIC0.44□□□□□ -2.34
RPGRIP1Q96KN7 MIR8062-201ENST00000621515 85 ntBASIC0.44□□□□□ -2.34
RPGRIP1Q96KN7 MIR376A2-201ENST00000636782 80 ntBASIC0.44□□□□□ -2.34
RPGRIP1Q96KN7 Y_RNA.11-201ENST00000362375 109 ntBASIC0.43□□□□□ -2.34
RPGRIP1Q96KN7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
RPGRIP1Q96KN7 Y_RNA.461-201ENST00000384263 103 ntBASIC0.43□□□□□ -2.34
RPGRIP1Q96KN7 MIR125B2-201ENST00000385128 89 ntBASIC0.43□□□□□ -2.34
RPGRIP1Q96KN7 RNU6-381P-201ENST00000391259 108 ntBASIC0.43□□□□□ -2.34
RPGRIP1Q96KN7 MIR1302-6-201ENST00000408466 90 ntBASIC0.43□□□□□ -2.34
RPGRIP1Q96KN7 RN7SKP12-201ENST00000516275 143 ntBASIC0.43□□□□□ -2.34
RPGRIP1Q96KN7 AP003072.1-201ENST00000531740 145 ntBASIC0.43□□□□□ -2.34
RPGRIP1Q96KN7 AC008608.1-201ENST00000603910 127 ntBASIC0.43□□□□□ -2.34
RPGRIP1Q96KN7 AL162730.1-201ENST00000605734 292 ntBASIC0.43□□□□□ -2.34
RPGRIP1Q96KN7 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.43□□□□□ -2.34
RPGRIP1Q96KN7 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
RPGRIP1Q96KN7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
RPGRIP1Q96KN7 RNU4-45P-201ENST00000365469 141 ntBASIC0.42□□□□□ -2.34
RPGRIP1Q96KN7 Y_RNA.416-201ENST00000384014 113 ntBASIC0.42□□□□□ -2.34
RPGRIP1Q96KN7 Y_RNA.422-201ENST00000384054 114 ntBASIC0.42□□□□□ -2.34
RPGRIP1Q96KN7 RNU6-364P-201ENST00000384387 107 ntBASIC0.42□□□□□ -2.34
RPGRIP1Q96KN7 SNORA26.6-201ENST00000391256 115 ntBASIC0.42□□□□□ -2.34
RPGRIP1Q96KN7 MIR1257-201ENST00000408490 117 ntBASIC0.42□□□□□ -2.34
RPGRIP1Q96KN7 RNU7-102P-201ENST00000458948 62 ntBASIC0.42□□□□□ -2.34
RPGRIP1Q96KN7 RNU7-45P-201ENST00000459460 63 ntBASIC0.42□□□□□ -2.34
RPGRIP1Q96KN7 RNU6-561P-201ENST00000516222 102 ntBASIC0.42□□□□□ -2.34
RPGRIP1Q96KN7 Y_RNA.720-201ENST00000517166 92 ntBASIC0.42□□□□□ -2.34
RPGRIP1Q96KN7 AC023932.2-201ENST00000603176 175 ntBASIC0.42□□□□□ -2.34
RPGRIP1Q96KN7 MIR6717-201ENST00000622747 73 ntBASIC0.42□□□□□ -2.34
RPGRIP1Q96KN7 U6.104-201ENST00000637979 90 ntBASIC0.42□□□□□ -2.34
RPGRIP1Q96KN7 MIR6086-201ENST00000638065 55 ntBASIC0.42□□□□□ -2.34
RPGRIP1Q96KN7 MIR302B-201ENST00000362188 73 ntBASIC0.41□□□□□ -2.34
RPGRIP1Q96KN7 MIR30D-201ENST00000362283 70 ntBASIC0.41□□□□□ -2.34
RPGRIP1Q96KN7 RNU6-653P-201ENST00000363074 106 ntBASIC0.41□□□□□ -2.34
RPGRIP1Q96KN7 Y_RNA.351-201ENST00000365436 96 ntBASIC0.41□□□□□ -2.34
RPGRIP1Q96KN7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.41□□□□□ -2.34
RPGRIP1Q96KN7 SNORA68.3-201ENST00000515906 83 ntBASIC0.41□□□□□ -2.34
RPGRIP1Q96KN7 AC090897.1-201ENST00000580909 226 ntBASIC0.41□□□□□ -2.34
RPGRIP1Q96KN7 MIR3129-201ENST00000581095 76 ntBASIC0.41□□□□□ -2.34
RPGRIP1Q96KN7 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
RPGRIP1Q96KN7 RNU4-17P-201ENST00000365598 141 ntBASIC0.4□□□□□ -2.35
RPGRIP1Q96KN7 RNU6-472P-201ENST00000384299 107 ntBASIC0.4□□□□□ -2.35
RPGRIP1Q96KN7 Y_RNA.518-201ENST00000384552 113 ntBASIC0.4□□□□□ -2.35
RPGRIP1Q96KN7 MT-TF-201ENST00000387314 71 ntBASIC0.4□□□□□ -2.35
RPGRIP1Q96KN7 RNU6-1319P-201ENST00000390855 104 ntBASIC0.4□□□□□ -2.35
RPGRIP1Q96KN7 RNU6-747P-201ENST00000390928 104 ntBASIC0.4□□□□□ -2.35
RPGRIP1Q96KN7 RNU6-241P-201ENST00000391148 104 ntBASIC0.4□□□□□ -2.35
RPGRIP1Q96KN7 SNORD100-201ENST00000408573 76 ntBASIC0.4□□□□□ -2.35
RPGRIP1Q96KN7 RNU6-447P-201ENST00000410293 104 ntBASIC0.4□□□□□ -2.35
RPGRIP1Q96KN7 RNU6-1118P-201ENST00000410382 104 ntBASIC0.4□□□□□ -2.35
RPGRIP1Q96KN7 RNU6-1076P-201ENST00000410397 104 ntBASIC0.4□□□□□ -2.35
RPGRIP1Q96KN7 RNU6-355P-201ENST00000410427 104 ntBASIC0.4□□□□□ -2.35
RPGRIP1Q96KN7 RNU6-791P-201ENST00000410467 104 ntBASIC0.4□□□□□ -2.35
RPGRIP1Q96KN7 RNU6-705P-201ENST00000410601 104 ntBASIC0.4□□□□□ -2.35
RPGRIP1Q96KN7 RNU6-1100P-201ENST00000410691 104 ntBASIC0.4□□□□□ -2.35
RPGRIP1Q96KN7 RNU6-860P-201ENST00000410860 104 ntBASIC0.4□□□□□ -2.35
RPGRIP1Q96KN7 RNU6-1217P-201ENST00000411276 104 ntBASIC0.4□□□□□ -2.35
RPGRIP1Q96KN7 RNU6-785P-201ENST00000411324 104 ntBASIC0.4□□□□□ -2.35
RPGRIP1Q96KN7 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 183.9 ms