Protein–RNA interactions for Protein: Q96JC1

VPS39, Vam6/Vps39-like protein, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS39Q96JC1 Y_RNA.176-201ENST00000363815 109 ntBASIC0.45□□□□□ -2.34
VPS39Q96JC1 Y_RNA.292-201ENST00000364904 97 ntBASIC0.45□□□□□ -2.34
VPS39Q96JC1 Y_RNA.308-201ENST00000365043 101 ntBASIC0.45□□□□□ -2.34
VPS39Q96JC1 Y_RNA.410-201ENST00000383992 113 ntBASIC0.45□□□□□ -2.34
VPS39Q96JC1 RNY3P5-201ENST00000384127 102 ntBASIC0.45□□□□□ -2.34
VPS39Q96JC1 Y_RNA.459-201ENST00000384251 102 ntBASIC0.45□□□□□ -2.34
VPS39Q96JC1 RNU6-738P-201ENST00000384531 106 ntBASIC0.45□□□□□ -2.34
VPS39Q96JC1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.45□□□□□ -2.34
VPS39Q96JC1 AC114737.2-201ENST00000421583 173 ntBASIC0.45□□□□□ -2.34
VPS39Q96JC1 RN7SKP12-201ENST00000516275 143 ntBASIC0.45□□□□□ -2.34
VPS39Q96JC1 AL162730.1-201ENST00000605734 292 ntBASIC0.45□□□□□ -2.34
VPS39Q96JC1 Y_RNA.518-201ENST00000384552 113 ntBASIC0.44□□□□□ -2.34
VPS39Q96JC1 MIR568-201ENST00000385036 95 ntBASIC0.44□□□□□ -2.34
VPS39Q96JC1 SNORA26-201ENST00000391286 122 ntBASIC0.44□□□□□ -2.34
VPS39Q96JC1 RNU6-177P-201ENST00000411257 104 ntBASIC0.44□□□□□ -2.34
VPS39Q96JC1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.44□□□□□ -2.34
VPS39Q96JC1 SEPT7P4-201ENST00000437076 306 ntBASIC0.44□□□□□ -2.34
VPS39Q96JC1 SNORD127-201ENST00000458892 86 ntBASIC0.44□□□□□ -2.34
VPS39Q96JC1 RNU7-102P-201ENST00000458948 62 ntBASIC0.44□□□□□ -2.34
VPS39Q96JC1 RNU7-185P-201ENST00000459215 60 ntBASIC0.44□□□□□ -2.34
VPS39Q96JC1 RNU6-229P-201ENST00000516614 102 ntBASIC0.44□□□□□ -2.34
VPS39Q96JC1 RNU6-126P-201ENST00000516685 103 ntBASIC0.44□□□□□ -2.34
VPS39Q96JC1 AL596211.1-201ENST00000569873 2277 ntBASIC0.43□□□□□ -2.34
VPS39Q96JC1 SNORA63-201ENST00000363450 132 ntBASIC0.43□□□□□ -2.34
VPS39Q96JC1 Y_RNA.145-201ENST00000363527 102 ntBASIC0.43□□□□□ -2.34
VPS39Q96JC1 RNU4-17P-201ENST00000365598 141 ntBASIC0.43□□□□□ -2.34
VPS39Q96JC1 Y_RNA.477-201ENST00000384352 108 ntBASIC0.43□□□□□ -2.34
VPS39Q96JC1 MIR563-201ENST00000385080 79 ntBASIC0.43□□□□□ -2.34
VPS39Q96JC1 RNU6-493P-201ENST00000391321 108 ntBASIC0.43□□□□□ -2.34
VPS39Q96JC1 MIR938-201ENST00000401216 83 ntBASIC0.43□□□□□ -2.34
VPS39Q96JC1 AL358176.2-201ENST00000425769 204 ntBASIC0.43□□□□□ -2.34
VPS39Q96JC1 MTND1P19-201ENST00000511780 315 ntBASIC0.43□□□□□ -2.34
VPS39Q96JC1 RNU7-156P-201ENST00000517214 74 ntBASIC0.43□□□□□ -2.34
VPS39Q96JC1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.43□□□□□ -2.34
VPS39Q96JC1 AL360085.1-201ENST00000604713 532 ntBASIC0.43□□□□□ -2.34
VPS39Q96JC1 RNU2-4P-201ENST00000606190 192 ntBASIC0.43□□□□□ -2.34
VPS39Q96JC1 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
VPS39Q96JC1 MIR302B-201ENST00000362188 73 ntBASIC0.42□□□□□ -2.34
VPS39Q96JC1 SNORD27-201ENST00000363981 72 ntBASIC0.42□□□□□ -2.34
VPS39Q96JC1 Y_RNA.262-201ENST00000364641 102 ntBASIC0.42□□□□□ -2.34
VPS39Q96JC1 RNU6-923P-201ENST00000364753 107 ntBASIC0.42□□□□□ -2.34
VPS39Q96JC1 Y_RNA.352-201ENST00000365439 102 ntBASIC0.42□□□□□ -2.34
VPS39Q96JC1 MIR125B2-201ENST00000385128 89 ntBASIC0.42□□□□□ -2.34
VPS39Q96JC1 MIR140-201ENST00000385282 100 ntBASIC0.42□□□□□ -2.34
VPS39Q96JC1 RNU6-679P-201ENST00000391003 106 ntBASIC0.42□□□□□ -2.34
VPS39Q96JC1 MTND2P23-201ENST00000422990 651 ntBASIC0.42□□□□□ -2.34
VPS39Q96JC1 AC098934.3-201ENST00000430450 190 ntBASIC0.42□□□□□ -2.34
VPS39Q96JC1 AL121914.1-201ENST00000450188 156 ntBASIC0.42□□□□□ -2.34
VPS39Q96JC1 MIR18B-201ENST00000454574 71 ntBASIC0.42□□□□□ -2.34
VPS39Q96JC1 RNU6-1132P-201ENST00000459214 107 ntBASIC0.42□□□□□ -2.34
VPS39Q96JC1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.42□□□□□ -2.34
VPS39Q96JC1 MIR5197-201ENST00000583721 112 ntBASIC0.42□□□□□ -2.34
VPS39Q96JC1 AC091932.4-201ENST00000623386 200 ntBASIC0.42□□□□□ -2.34
VPS39Q96JC1 RNY1-201ENST00000364228 113 ntBASIC0.41□□□□□ -2.34
VPS39Q96JC1 RNU6-728P-201ENST00000365375 104 ntBASIC0.41□□□□□ -2.34
VPS39Q96JC1 RNU6-1336P-201ENST00000383886 109 ntBASIC0.41□□□□□ -2.34
VPS39Q96JC1 SNORA68.3-201ENST00000515906 83 ntBASIC0.41□□□□□ -2.34
VPS39Q96JC1 Y_RNA.65-201ENST00000362846 100 ntBASIC0.4□□□□□ -2.35
VPS39Q96JC1 RNY4P28-201ENST00000365281 93 ntBASIC0.4□□□□□ -2.35
VPS39Q96JC1 RNU6-364P-201ENST00000384387 107 ntBASIC0.4□□□□□ -2.35
VPS39Q96JC1 Y_RNA.539-201ENST00000384635 107 ntBASIC0.4□□□□□ -2.35
VPS39Q96JC1 MIR598-201ENST00000384868 97 ntBASIC0.4□□□□□ -2.35
VPS39Q96JC1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
VPS39Q96JC1 MIR1257-201ENST00000408490 117 ntBASIC0.4□□□□□ -2.35
VPS39Q96JC1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.4□□□□□ -2.35
VPS39Q96JC1 Y_RNA.617-201ENST00000410920 90 ntBASIC0.4□□□□□ -2.35
VPS39Q96JC1 Y_RNA.618-201ENST00000410949 107 ntBASIC0.4□□□□□ -2.35
VPS39Q96JC1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
VPS39Q96JC1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.4□□□□□ -2.35
VPS39Q96JC1 Y_RNA.680-201ENST00000516441 93 ntBASIC0.4□□□□□ -2.35
VPS39Q96JC1 MIR4308-201ENST00000580634 81 ntBASIC0.4□□□□□ -2.35
VPS39Q96JC1 MIR4744-201ENST00000581563 82 ntBASIC0.4□□□□□ -2.35
VPS39Q96JC1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.4□□□□□ -2.35
VPS39Q96JC1 AC243829.3-201ENST00000622177 108 ntBASIC0.4□□□□□ -2.35
VPS39Q96JC1 U6.104-201ENST00000637979 90 ntBASIC0.4□□□□□ -2.35
VPS39Q96JC1 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
VPS39Q96JC1 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.39□□□□□ -2.35
VPS39Q96JC1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.39□□□□□ -2.35
VPS39Q96JC1 AC090897.1-201ENST00000580909 226 ntBASIC0.39□□□□□ -2.35
VPS39Q96JC1 Y_RNA.133-201ENST00000363428 110 ntBASIC0.38□□□□□ -2.35
VPS39Q96JC1 Y_RNA.149-201ENST00000363558 117 ntBASIC0.38□□□□□ -2.35
VPS39Q96JC1 RNU6-978P-201ENST00000364371 103 ntBASIC0.38□□□□□ -2.35
VPS39Q96JC1 Y_RNA.542-201ENST00000384641 111 ntBASIC0.38□□□□□ -2.35
VPS39Q96JC1 Y_RNA.562-201ENST00000384695 113 ntBASIC0.38□□□□□ -2.35
VPS39Q96JC1 RNU6-1319P-201ENST00000390855 104 ntBASIC0.38□□□□□ -2.35
VPS39Q96JC1 RNU6-747P-201ENST00000390928 104 ntBASIC0.38□□□□□ -2.35
VPS39Q96JC1 RNU6-578P-201ENST00000390980 103 ntBASIC0.38□□□□□ -2.35
VPS39Q96JC1 RNU6-241P-201ENST00000391148 104 ntBASIC0.38□□□□□ -2.35
VPS39Q96JC1 MIR936-201ENST00000401264 98 ntBASIC0.38□□□□□ -2.35
VPS39Q96JC1 RNU6-447P-201ENST00000410293 104 ntBASIC0.38□□□□□ -2.35
VPS39Q96JC1 RNU6-1118P-201ENST00000410382 104 ntBASIC0.38□□□□□ -2.35
VPS39Q96JC1 RNU6-1076P-201ENST00000410397 104 ntBASIC0.38□□□□□ -2.35
VPS39Q96JC1 RNU6-355P-201ENST00000410427 104 ntBASIC0.38□□□□□ -2.35
VPS39Q96JC1 RNU6-791P-201ENST00000410467 104 ntBASIC0.38□□□□□ -2.35
VPS39Q96JC1 RNU6-705P-201ENST00000410601 104 ntBASIC0.38□□□□□ -2.35
VPS39Q96JC1 RNU4-43P-201ENST00000410628 137 ntBASIC0.38□□□□□ -2.35
VPS39Q96JC1 RNU6-1100P-201ENST00000410691 104 ntBASIC0.38□□□□□ -2.35
VPS39Q96JC1 RNU6-860P-201ENST00000410860 104 ntBASIC0.38□□□□□ -2.35
VPS39Q96JC1 RNU6-1217P-201ENST00000411276 104 ntBASIC0.38□□□□□ -2.35
VPS39Q96JC1 RNU6-785P-201ENST00000411324 104 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 195.7 ms