Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.33□□□□□ -2.04
SHISA4Q96DD7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.33□□□□□ -2.04
SHISA4Q96DD7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SHISA4Q96DD7 RNU6-832P-201ENST00000363319 107 ntBASIC2.32□□□□□ -2.04
SHISA4Q96DD7 Y_RNA.360-201ENST00000365512 102 ntBASIC2.32□□□□□ -2.04
SHISA4Q96DD7 RNU6-1031P-201ENST00000384773 107 ntBASIC2.32□□□□□ -2.04
SHISA4Q96DD7 AC019129.1-201ENST00000403786 261 ntBASIC2.32□□□□□ -2.04
SHISA4Q96DD7 RNU7-67P-201ENST00000459003 62 ntBASIC2.32□□□□□ -2.04
SHISA4Q96DD7 RNA5SP82-201ENST00000516707 92 ntBASIC2.32□□□□□ -2.04
SHISA4Q96DD7 RNA5SP137-201ENST00000516833 135 ntBASIC2.32□□□□□ -2.04
SHISA4Q96DD7 MIR4446-201ENST00000578505 67 ntBASIC2.32□□□□□ -2.04
SHISA4Q96DD7 Y_RNA.773-201ENST00000607168 90 ntBASIC2.32□□□□□ -2.04
SHISA4Q96DD7 AC095038.3-201ENST00000634439 195 ntBASIC2.32□□□□□ -2.04
SHISA4Q96DD7 MIR1255B1-201ENST00000636325 63 ntBASIC2.32□□□□□ -2.04
SHISA4Q96DD7 MAPK10-266ENST00000641066 6555 ntBASIC2.31□□□□□ -2.04
SHISA4Q96DD7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.31□□□□□ -2.04
SHISA4Q96DD7 SNORD115-2-201ENST00000362842 82 ntBASIC2.31□□□□□ -2.04
SHISA4Q96DD7 SNORD115-20-201ENST00000365099 82 ntBASIC2.31□□□□□ -2.04
SHISA4Q96DD7 RNA5SP190-201ENST00000365222 118 ntBASIC2.31□□□□□ -2.04
SHISA4Q96DD7 SNORA6-201ENST00000384033 151 ntBASIC2.31□□□□□ -2.04
SHISA4Q96DD7 RNU6-1124P-201ENST00000384169 107 ntBASIC2.31□□□□□ -2.04
SHISA4Q96DD7 RNU6-813P-201ENST00000384691 107 ntBASIC2.31□□□□□ -2.04
SHISA4Q96DD7 MIR597-201ENST00000384968 97 ntBASIC2.31□□□□□ -2.04
SHISA4Q96DD7 MIR516B2-201ENST00000385190 85 ntBASIC2.31□□□□□ -2.04
SHISA4Q96DD7 MIR1255A-201ENST00000408338 113 ntBASIC2.31□□□□□ -2.04
SHISA4Q96DD7 Y_RNA.593-201ENST00000410292 98 ntBASIC2.31□□□□□ -2.04
SHISA4Q96DD7 RNU2-7P-201ENST00000410794 178 ntBASIC2.31□□□□□ -2.04
SHISA4Q96DD7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.31□□□□□ -2.04
SHISA4Q96DD7 RNU6-958P-201ENST00000516995 106 ntBASIC2.31□□□□□ -2.04
SHISA4Q96DD7 DNAJC19P9-201ENST00000555084 351 ntBASIC2.31□□□□□ -2.04
SHISA4Q96DD7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SHISA4Q96DD7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SHISA4Q96DD7 MIRLET7G-201ENST00000362280 84 ntBASIC2.3□□□□□ -2.04
SHISA4Q96DD7 Y_RNA.96-201ENST00000363092 109 ntBASIC2.3□□□□□ -2.04
SHISA4Q96DD7 Y_RNA.171-201ENST00000363760 102 ntBASIC2.3□□□□□ -2.04
SHISA4Q96DD7 Y_RNA.221-201ENST00000364248 96 ntBASIC2.3□□□□□ -2.04
SHISA4Q96DD7 SNORA18-201ENST00000384416 132 ntBASIC2.3□□□□□ -2.04
SHISA4Q96DD7 RNU1-148P-201ENST00000384472 162 ntBASIC2.3□□□□□ -2.04
SHISA4Q96DD7 MIR520A-201ENST00000384862 85 ntBASIC2.3□□□□□ -2.04
SHISA4Q96DD7 MIR577-201ENST00000385196 96 ntBASIC2.3□□□□□ -2.04
SHISA4Q96DD7 AC096949.1-201ENST00000412047 152 ntBASIC2.3□□□□□ -2.04
SHISA4Q96DD7 RPS29P29-201ENST00000456396 171 ntBASIC2.3□□□□□ -2.04
SHISA4Q96DD7 RNU7-45P-201ENST00000459460 63 ntBASIC2.3□□□□□ -2.04
SHISA4Q96DD7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.3□□□□□ -2.04
SHISA4Q96DD7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.3□□□□□ -2.04
SHISA4Q96DD7 SNORA22.1-201ENST00000362701 134 ntBASIC2.29□□□□□ -2.04
SHISA4Q96DD7 RNA5SP465-201ENST00000391195 109 ntBASIC2.29□□□□□ -2.04
SHISA4Q96DD7 RNA5SP57-201ENST00000459463 123 ntBASIC2.29□□□□□ -2.04
SHISA4Q96DD7 RNU6-521P-201ENST00000516663 105 ntBASIC2.29□□□□□ -2.04
SHISA4Q96DD7 RNA5SP33-201ENST00000516687 98 ntBASIC2.29□□□□□ -2.04
SHISA4Q96DD7 MIR6895-201ENST00000613497 78 ntBASIC2.29□□□□□ -2.04
SHISA4Q96DD7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
SHISA4Q96DD7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.28□□□□□ -2.04
SHISA4Q96DD7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
SHISA4Q96DD7 Y_RNA.224-201ENST00000364308 111 ntBASIC2.28□□□□□ -2.04
SHISA4Q96DD7 RNU6-787P-201ENST00000384032 107 ntBASIC2.28□□□□□ -2.04
SHISA4Q96DD7 RNU6-1067P-201ENST00000384752 107 ntBASIC2.28□□□□□ -2.04
SHISA4Q96DD7 MIR605-201ENST00000385078 83 ntBASIC2.28□□□□□ -2.04
SHISA4Q96DD7 SNORA7.5-201ENST00000410672 110 ntBASIC2.28□□□□□ -2.04
SHISA4Q96DD7 AC004941.2-201ENST00000427009 228 ntBASIC2.28□□□□□ -2.04
SHISA4Q96DD7 AC025033.1-201ENST00000463883 194 ntBASIC2.28□□□□□ -2.04
SHISA4Q96DD7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.05
SHISA4Q96DD7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SHISA4Q96DD7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SHISA4Q96DD7 Y_RNA.17-201ENST00000362433 111 ntBASIC2.27□□□□□ -2.05
SHISA4Q96DD7 RNU6-170P-201ENST00000362832 104 ntBASIC2.27□□□□□ -2.05
SHISA4Q96DD7 SNORD45B-201ENST00000364617 72 ntBASIC2.27□□□□□ -2.05
SHISA4Q96DD7 Y_RNA.290-201ENST00000364879 114 ntBASIC2.27□□□□□ -2.05
SHISA4Q96DD7 AC003989.2-201ENST00000440224 169 ntBASIC2.27□□□□□ -2.05
SHISA4Q96DD7 RNU7-34P-201ENST00000459394 64 ntBASIC2.27□□□□□ -2.05
SHISA4Q96DD7 RNU7-61P-201ENST00000515897 61 ntBASIC2.27□□□□□ -2.05
SHISA4Q96DD7 RNU6-1018P-201ENST00000516577 106 ntBASIC2.27□□□□□ -2.05
SHISA4Q96DD7 RNU6-1258P-201ENST00000516911 111 ntBASIC2.27□□□□□ -2.05
SHISA4Q96DD7 SNORD14A-201ENST00000606526 91 ntBASIC2.27□□□□□ -2.05
SHISA4Q96DD7 AC245884.12-201ENST00000615364 59 ntBASIC2.27□□□□□ -2.05
SHISA4Q96DD7 AC012531.4-201ENST00000616509 177 ntBASIC2.27□□□□□ -2.05
SHISA4Q96DD7 AP000648.3-201ENST00000623539 4507 ntBASIC2.27□□□□□ -2.05
SHISA4Q96DD7 Y_RNA.430-201ENST00000384081 110 ntBASIC2.26□□□□□ -2.05
SHISA4Q96DD7 SNORA24-201ENST00000384096 131 ntBASIC2.26□□□□□ -2.05
SHISA4Q96DD7 RNU6-644P-201ENST00000391155 98 ntBASIC2.26□□□□□ -2.05
SHISA4Q96DD7 AC093850.1-201ENST00000454121 251 ntBASIC2.26□□□□□ -2.05
SHISA4Q96DD7 RNU7-73P-201ENST00000458743 63 ntBASIC2.26□□□□□ -2.05
SHISA4Q96DD7 RNU2-13P-201ENST00000515909 113 ntBASIC2.26□□□□□ -2.05
SHISA4Q96DD7 RNU6-795P-201ENST00000516323 103 ntBASIC2.26□□□□□ -2.05
SHISA4Q96DD7 MIR4709-201ENST00000577272 72 ntBASIC2.26□□□□□ -2.05
SHISA4Q96DD7 MIR548AE2-201ENST00000583456 67 ntBASIC2.26□□□□□ -2.05
SHISA4Q96DD7 SNORA4-201ENST00000584302 138 ntBASIC2.26□□□□□ -2.05
SHISA4Q96DD7 AC243994.1-201ENST00000618627 109 ntBASIC2.26□□□□□ -2.05
SHISA4Q96DD7 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.26□□□□□ -2.05
SHISA4Q96DD7 AL513423.1-201ENST00000621695 132 ntBASIC2.26□□□□□ -2.05
SHISA4Q96DD7 MIR6717-201ENST00000622747 73 ntBASIC2.26□□□□□ -2.05
SHISA4Q96DD7 MIR6841-201ENST00000637129 72 ntBASIC2.26□□□□□ -2.05
SHISA4Q96DD7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
SHISA4Q96DD7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
SHISA4Q96DD7 RNU6-1125P-201ENST00000363601 107 ntBASIC2.25□□□□□ -2.05
SHISA4Q96DD7 Y_RNA.244-201ENST00000364484 109 ntBASIC2.25□□□□□ -2.05
SHISA4Q96DD7 Y_RNA.377-201ENST00000365644 108 ntBASIC2.25□□□□□ -2.05
SHISA4Q96DD7 Y_RNA.470-201ENST00000384307 117 ntBASIC2.25□□□□□ -2.05
SHISA4Q96DD7 RNU6-616P-201ENST00000384353 107 ntBASIC2.25□□□□□ -2.05
SHISA4Q96DD7 SNORA48.1-201ENST00000390879 135 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms